GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:28:18

Sequence gi568815584r:33826959_34050752 : 223794 bp : 41.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   2201   2758  558  1  0   70   42   180 0.645   7.49
 1.02 PlyA +   2767   2772    6                               1.05

 2.00 Prom +   4472   4511   40                              -3.65
 2.01 Init +  11503  11567   65  0  2   71  115    26 0.196   4.27
 2.02 Intr +  18718  18850  133  1  1   84   55   140 0.136  10.03
 2.03 Intr +  21089  21203  115  1  1   53  110    66 0.544   4.40
 2.04 Intr +  24423  24488   66  1  0    8   75   116 0.044   0.26
 2.05 Intr +  25397  25532  136  0  1  -12   87   101 0.069  -1.29
 2.06 Intr +  26479  26535   57  1  0   60   81    92 0.225   2.78
 2.07 Intr +  29233  29401  169  1  1  -15   71    95 0.076  -3.47
 2.08 Term +  32246  32419  174  1  0   66   42   115 0.282   1.48
 2.09 PlyA +  34042  34047    6                               1.05

 3.05 PlyA -  35099  35094    6                               1.05
 3.04 Term -  35629  35463  167  2  2  111   48    99 0.665   5.30
 3.03 Intr -  41316  41240   77  2  2   59  115    55 0.516   3.54
 3.02 Intr -  43065  42999   67  1  1   35   86    66 0.512  -1.86
 3.01 Init -  47877  47667  211  0  1   60  113   132 0.777  11.89
 3.00 Prom -  49344  49305   40                              -4.55

 4.00 Prom +  52771  52810   40                              -6.75
 4.01 Init +  59731  59931  201  0  0   74   65    97 0.121   4.92
 4.02 Term +  71186  71407  222  1  0   87   42   296 0.996  20.83
 4.03 PlyA +  71594  71599    6                               1.05

 5.00 Prom +  74938  74977   40                              -2.45
 5.01 Init +  84425  84539  115  1  1   79    4   143 0.869   5.42
 5.02 Intr +  85261  85296   36  2  0  104   81    57 0.777   3.92
 5.03 Intr +  85994  86082   89  0  2  105   -4    50 0.236  -3.73
 5.04 Intr +  88377  88456   80  2  2   60   80    83 0.189   2.13
 5.05 Intr +  91376  91506  131  2  2   73   73    56 0.263   2.02
 5.06 Term +  91859  92013  155  0  2  -21   44   208 0.497   2.60
 5.07 PlyA +  94007  94012    6                               1.05

 6.08 PlyA -  94375  94370    6                               1.05
 6.07 Term -  97835  97727  109  1  1   51   53    79 0.155  -2.30
 6.06 Intr - 102254 102118  137  2  2   98   90    66 0.911   6.25
 6.05 Intr - 104257 104138  120  1  0   88   75   175 0.660  15.97
 6.04 Intr - 109650 109546  105  0  0  126   16    57 0.225   1.79
 6.03 Intr - 124202 123438  765  2  0  -43   97   723 0.375  50.84
 6.02 Intr - 130587 130450  138  0  0   74   34   154 0.138   8.34
 6.01 Init - 130841 130791   51  2  0   50   74     3 0.666  -3.69
 6.00 Prom - 131077 131038   40                              -8.95

 7.00 Prom + 131614 131653   40                              -8.05
 7.01 Init + 133356 133424   69  2  0  113   64    33 0.905   2.50
 7.02 Intr + 134023 134182  160  0  1  133   29    96 0.893   6.84
 7.03 Intr + 137415 137519  105  1  0   20   74   114 0.643   2.47
 7.04 Intr + 138675 138760   86  1  2   74   48   118 0.322   5.02
 7.05 Term + 151806 152180  375  2  0   52   55   146 0.512   1.45
 7.06 PlyA + 153265 153270    6                               1.05

 8.03 PlyA - 156596 156591    6                               1.05
 8.02 Term - 161119 160924  196  0  1   69   41   156 0.685   4.90
 8.01 Init - 163664 163612   53  2  2   71  111    18 0.721   3.08
 8.00 Prom - 164387 164348   40                              -6.75

 9.03 PlyA - 164594 164589    6                               1.05
 9.02 Term - 173521 173360  162  1  0   29   52   255 0.921  12.95
 9.01 Init - 177026 176799  228  2  0   56   56   149 0.840   6.92
 9.00 Prom - 178434 178395   40                              -5.75

10.05 PlyA - 179438 179433    6                               1.05
10.04 Term - 181540 181423  118  0  1   53   44   131 0.290   2.23
10.03 Intr - 203199 202899  301  1  1   39   44   212 0.320   6.77
10.02 Intr - 206971 206789  183  2  0   67   93   103 0.120   7.54
10.01 Init - 213750 213708   43  0  1   71   75    45 0.033   2.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  73824  73887   64  2  1   69   64    81 0.897   5.16
S.002 Term - 119893 119732  162  1  0   69   37   138 0.815   3.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_1|185_aa
MDKFLDTYTLPRLNQEEAESLNRSITDSEIEATINGLPTKKSPGADRFTARFYQWYKQEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDPKILSKILT
NQIQQHIKNLIHHDQAGFIPGIQDWFNIHKSINVIHHINRTKDKNHMIISIDAEKAFDEI
QQSSC

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_1|558_bp
atggataaattcctggacacatacaccctcccaagactaaaccaggaagaagctgaatct
ctgaatagatcaataacagactctgaaattgaggcaacaattaatggcctaccaaccaaa
aaaagtccaggagcagacagattcacagccagattctaccagtggtacaaacaggagctg
gtaccattccttctgaaactattccagtcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagcctggcagagacacaacgaaaaaagag
aattttagaccaatatccctgatgaacattgatccaaaaatcctcagtaaaatactgaca
aaccaaatccagcagcacatcaaaaaccttatccaccatgatcaagctggcttcatccct
gggattcaagactggttcaacatacacaaatcaataaatgtaatccatcatataaataga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacgaaatt
caacaatcttcatgctaa

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_2|304_aa
MSSVSQLRSKVTRYEADYREQRWMEHMPWYNIRKAKMQHAAITEDRTRPARRQPPWGSSG
KNSRPWLVGPETARRPYVLETHSQKSKDCIASTPALTFYRAKATASDDRVDGGADFAGIE
SERMSRVQRLGRDGRMGIGNMMTPVTQGKKGSPRRHGVQEGRRAQEQVMGFRGYGLQPTW
GTEALESSSHHHQAHGDLLQQPRETNASTVKKIMEEERGAAVLNGNSQGECLRRWHEPSG
LTAGSGQDLGIQLQSWHAEENALLETIRESSYVELLMDTKARALQQKYLHRASDKPVMTD
EFVC

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_2|915_bp
atgagctctgtttcccagctgaggtcaaaagtcaccagatatgaagcagattatagagaa
caaaggtggatggagcacatgccgtggtacaacattcggaaagccaagatgcagcatgca
gccatcactgaggacaggactaggccagcaaggaggcagccaccatggggaagctcaggg
aagaactccaggccctggctggttggaccagagactgctcgccgaccatatgttttggaa
acccattctcaaaaatcaaaagactgtatagcatcaacaccagcattgactttctatcga
gccaaagctacagcctcagatgaccgagtggatggtggtgctgattttgctggaatagag
tcagagaggatgagcagagttcagcgtttgggaagagatgggagaatggggataggaaac
atgatgaccccagtgacacagggcaagaaaggaagcccacgaaggcatggagtccaggaa
gggagaagagcacaagagcaggtgatgggtttcaggggctacggcctgcagcctacctgg
ggcactgaagctctggagagttcttcccaccaccaccaagctcatggtgatttgttacag
cagccacgggaaactaatgcaagtactgtgaagaaaataatggaggaagagagaggggca
gctgtgttgaatgggaatagccagggagagtgtctgaggagatggcatgagccctcaggg
ctaacggcggggagtggccaagacctgggcattcagttgcagtcctggcatgcagaggaa
aatgccctgttggaaactatcagagaatcatcctatgtggagcttctcatggatacaaaa
gccagagccttacaacagaaatacttacacagagcctcagacaaacctgtaatgacagat
gaatttgtctgttaa

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_3|173_aa
MWNQRWKWVTGRGWNSLEGSEEDRKMWESLELPRYLFNDFDKNHDSDMNNKGQAEVDSDG
DEELVGNWSKDLLLPDFSHAKQPIFLASERYQRNMLQDRGPNPDPKRGFLDLMQERIQDS
IISLNILQQHCMEPHRGSGTYYCLGEGACMAGRVQTRALGTGSRARAPGLKTA

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_3|522_bp
atgtggaatcaacgttggaaatgggtaacaggcagaggctggaacagtttggagggctca
gaagaagacaggaaaatgtgggaaagtttggaacttcctagatacttgttcaatgacttt
gacaaaaatcatgatagtgatatgaacaataagggccaggctgaggtggactcagatgga
gatgaggaacttgttgggaactggagcaaagatctcttattacctgactttagccatgcc
aagcagccaatatttctagcttctgaacgttaccaaagaaatatgttacaggacaggggt
cccaatccagaccccaagagagggttcttggatctcatgcaagaaagaattcaagattct
attatctctctgaacatcttgcagcagcattgcatggaaccccacagaggctctggtaca
tattattgtcttggggaaggagcatgcatggctggaagagtccagacaagagccttaggc
actggctccagggccagagcccctggtctaaaaacagcatga

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_4|140_aa
MGPRRPEPVTGSQVKAMSSGPRLVGFVCIIEAACLHVSSGSRAVGSAVQYVTNKAPSFPC
KKQTKQSGCQEEREEEEREEEEREEEEREEEEREEEEREEEEREEEEREEEEREEEEREE
REEEEEESCCVIWSQRNIMV

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_4|423_bp
atgggaccaaggaggccggaacctgtcactggaagccaggtcaaagccatgagcagtggc
ccacggcttgttgggttcgtctgtatcattgaagctgcctgtctgcatgtatcctctggc
tcgcgtgctgttggctctgcagtacaatatgtaaccaataaagctccctcctttccatgt
aaaaaacaaacaaaacaaagtggatgccaggaggagagggaggaggaggagagggaggag
gaggagagggaggaggaggagagggaggaggaggagagggaggaggaggagagggaggag
gaggagagggaggaggaggagagggaggaggaggagagggaggaggaggagagggaggag
agggaggaggaggaggaggaaagctgttgtgttatttggagccaaagaaatattatggtt
taa

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_5|201_aa
MPNPEIYYLPMVNIRALGPSRGIWAVKGIEALSVGLNEATVQAAVEAAEPTFLVSNNHSS
TLYFYELNGFLSATYEYEYLALLSGYALPVMSTRLSLHIPSEVHTSRHNNLAIRPINNPT
MTSKGSSERNSHTSPTLGQKLVGEEGMSKVVQSGAASVDVEAAASSPEDLSKIIDKGDYT
KQQCRSNSLLLEEDAMYDFHS

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_5|606_bp
atgcccaacccggagatttattatttgcctatggtaaatatccgagccctgggtccatcc
cgtggaatatgggctgtaaagggcattgaggcccttagtgttgggttaaatgaagccaca
gtccaggcagctgtggaggcagcagagcccaccttcctagtctctaataaccacagttct
acgctttacttctatgagctcaatggttttcttagcgctacgtatgaatatgaatatttg
gccctgttgagcggttatgccctgccagtgatgtccacacgtcttagtttgcacattccc
agtgaggttcatacaagcagacacaacaatcttgcaattaggccaattaataatcctaca
atgacctctaagggttcaagtgaaaggaacagtcacacatctccaactttaggtcaaaag
ttagttggtgaggaaggtatgtcgaaagttgtgcagagtggagcagcaagtgttgatgtt
gaagctgcagcaagttctccagaagatctatctaagatcattgataaaggtgactacact
aaacaacagtgtagatcaaacagccttctgttggaagaagatgccatgtacgactttcac
agctag

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_6|474_aa
MQIIRPHPRPTESETLGARSRKDWDQLPEPQRPLAVERGPHSNGASDLQPLTYTVEEGKK
ARSGGPGGGPGAEPVTRGVGRLKGRTSASPGVWPQSRQWWLPIPKRRPPTPCAALLAGPV
RKRVVELRTTPAGSRRQIPSPESCEKLSLVPDAAAARVPWQPQVSEPRATLPAPRLRARV
DRSLSGCTLGIPDLDSAGEMPLGHIMRLDLEKIALEYIVPCLHEVGFCYLDNFLGEVVGD
CVLERVKQLHCTGALRDGQLAGPRAGVSKRHLRGDQITWIGGNEEGCEAISFLLSLIDRL
VLYCGSRLGKYYVKERSKMNYQMGPLHQQGALMKAGPKVCDHGDALLTGHSQGAMVACYP
GNGTGYVRHVDNPNGDGRCITCIYYLNKNWDAKLHGGILRIFPEGKSFIADVEPIFDRLL
FFWSDRRNPHEVQPSYATRSTVVGSMTRIMEFARTVEASTPAVSTDRTASITWY

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_6|1425_bp
atgcaaattatcaggccccatcccagacctactgaatcagaaactctaggggccaggagc
aggaaagattgggatcagctacctgaaccccagagacccctggctgtagaaagagggcct
cacagcaacggtgccagcgaccttcagccactgacatatactgttgaggaagggaagaag
gcacgttctggcggtcccggaggcggtcccggggcggagcccgtgacgcgcggagtcggc
cggcttaagggccggacctcagcgtctcccggagtctggccgcagtcgcggcagtggtgg
cttcccatccccaaaaggcgccctccgactccttgcgccgcactgctcgccgggccagtc
cggaaacgggtcgtggagctccgcaccactcccgctggttcccgaaggcagatcccttct
cccgagagttgcgagaaactttcccttgtccccgacgctgcagcggctcgggtaccgtgg
cagccgcaggtttctgaaccccgggccacgctccccgcgcctcggcttcgcgctcgtgta
gatcgttccctctctggttgcacgctggggatcccggacctcgattctgcgggcgagatg
cccctgggacacatcatgaggctggacctggagaaaattgccctggagtacatcgtgccc
tgtctgcacgaggtgggcttctgctacctggacaacttcctgggcgaggtggtgggcgac
tgcgtcctggagcgcgtcaagcagctgcactgcaccggggccctgcgggacggccagctg
gcggggccgcgcgccggcgtctccaagcgacacctgcggggcgaccagatcacgtggatc
gggggcaacgaggagggctgcgaggccatcagcttcctcctgtccctcatcgacaggctg
gtcctctactgcgggagccggctgggcaaatactacgtcaaggagaggtctaagatgaat
taccaaatggggcccctacatcagcagggtgccttgatgaaggcaggacctaaagtatgt
gatcatggggatgccctgctcactggccacagtcaaggcgcaatggtggcttgctatccg
ggaaatggaacaggttatgttcgccacgtggacaaccccaacggtgatggtcgctgcatc
acctgcatctactatctgaacaagaattgggatgccaagctacatggtgggatcctgcgg
atatttccagaggggaaatcattcatagcagatgtggagcccatttttgacagactcctg
ttcttctggtcagatcgtaggaacccacacgaagtgcagccctcttacgcaaccagatcc
actgtggttggcagtatgaccagaatcatggaatttgctagaactgtggaagcttctact
cctgcagtaagcacagatcgcactgcctcaataacttggtattga

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_7|264_aa
MVKPCLGRARWLMPVIPALWEAELSPVLITIISHCNSLLSDIPTSAVAPRQSILYMEATA
FFLQVGAKVIAVFAIEMRLGAIGDFLAVEDAGLHFYCLKGGVGRGVENGFGGPHGRAHSL
LGLADAPTRVGFPARALSPDSKAPGSEHRTSLEGCGLPVVCVCTPGSTRRLPQDFLGTGN
FKKKVFDIVNFHVYSFLKLINLRLELTVIGWSSLPNPSFQMVCSPSLQKKNMPLTIQNPK
IAHVPRVQKPPGHQMTGQLENARS

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_7|795_bp
atggtgaaaccctgtctcggccgggcgcggtggctcatgcctgtaatcccagcactttgg
gaggctgagctatcaccagttctgatcaccatcatttctcactgcaacagccttctctca
gatatccctacttctgcagttgcaccacgtcaatccattctctacatggaagccacagcc
ttcttcctacaggttggtgcaaaagtaattgctgtttttgccattgaaatgagattagga
gccattggagactttttagctgtggaggatgcaggacttcatttttattgtttaaaaggt
ggcgttggccgtggtgtagagaatggatttgggggtcctcatggcagggcacacagcctt
ctgggcttggcagatgcacctacccgtgtgggcttccctgctcgagctctgagtcctgat
agcaaagctccggggtctgagcacagaacttcactagaaggctgtggtcttcctgtggtg
tgtgtgtgtacccctggaagtacacgaagacttcctcaggacttcttgggcactggcaat
tttaagaaaaaagtttttgacattgtcaacttccatgtgtattctttcctaaaattaatt
aatttgcgtttagaattgactgtgattggctggtcctccttacccaacccgtcttttcaa
atggtttgctctcctagtttacaaaagaaaaatatgcctctcaccatccagaatcctaaa
atagcgcatgttcccagggtacaaaaacctccaggacaccaaatgacaggacaattggag
aatgcacgctcctga

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_8|82_aa
MEENGRGPDPHPQSQGTWCFQYAGNFSTTAFNQKDEMLLQEHHRSDDGKATGVVQRSSEP
LRTLSLLFLLHITVNLASSSGV

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_8|249_bp
atggaagaaaatggaagagggcctgacccacaccctcaaagtcagggaacttggtgtttc
caatatgcaggtaatttttcaaccactgcctttaaccaaaaggatgaaatgttactacaa
gagcatcatagatcagatgacggtaaggccacaggggtagttcaaagatcatcagaacca
ctccgaacattgtctttactgttcctgctgcacatcacagtaaatttagcatcctcctct
ggagtataa

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_9|129_aa
MDQKVSTISSSQTLLVNWTHRLLGDYHTSAQETPRVSNAEHLASGFRPITVKTVAVMPPP
MLPSSTPKCPASWAGRGRINAMEELKRGPMGPEHQDHSILLERQGKASRKKEEEEEEEEE
EEEEEEECI

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_9|390_bp
atggatcagaaggtgtccaccatatccagttcccaaaccttactggttaactggactcac
aggcttttaggagattatcacacgtcagcacaggagactccaagggtgagtaatgctgag
catctggcctctgggtttcgtcccataactgtgaaaacagttgcagtaatgcccccacca
atgcttccttcctcaacgcccaagtgtccagcttcatgggctggcaggggccgtataaat
gccatggaagaactcaaaagggggcccatgggccctgaacaccaggaccattcaattctt
ttagaaagacaaggcaaggcaagcagaaaaaaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaatgcatttga

>gi568815584r:33826959_34050752|GENSCAN_predicted_peptide_10|214_aa
MDVPVMVDCCDGFVAHNRCLLNILKGMKITDYLFKQKLGHVSPQSPKKQTSRQDQTWQDF
SSVKVYEKVARELKEGGQSSGKEKLDKPPPRNWESTSPTSPTPPPSGIIPRSAGYNRCLL
VLESAESNCCLCTAFWLLQFGAVPSRTKQIAIPFPAPPHPLEHLAVFADFRLSPLGNTDV
AGGHYPKRINIETENQLSHVLTHKWELNLGYTQT

>gi568815584r:33826959_34050752|GENSCAN_predicted_CDS_10|645_bp
atggatgtgccggtgatggttgattgttgtgatggttttgtagcacataataggtgtttg
ctaaatattcttaagggaatgaagattacagattatttattcaagcaaaaactggggcat
gttagtccccagtcccccaagaagcagacatcaagacaagatcaaacatggcaggatttt
agtagtgtgaaagtctacgagaaagtggcaagggagctaaaggaaggaggccaatcctca
ggcaaagagaagcttgacaaacctccaccaaggaactgggaaagtacttcccccacctcc
ccaaccccacctcccagtgggatcattccaaggtcagcaggctacaaccgctgcctcctt
gtgctggaaagcgcagaaagtaactgctgtctttgcacagcattctggcttcttcagttt
ggggctgtcccttctcgaaccaaacaaattgccatccccttcccagcccctcctcacccc
ctggaacatttggcagtgtttgcggactttcggttgtcaccattgggcaacacggatgtg
gctggaggccattatcctaagcgaattaacatagaaacagaaaaccaattatctcatgtc
ctcactcataagtgggagctaaatcttggctacacgcagacataa