GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:21:35

Sequence gi568815597f:19565848_19779365 : 213518 bp : 48.69% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  16198  16413  216  0  0   56   38   119 0.354   2.39
 1.02 Term +  23205  23375  171  2  0  109   55    49 0.679   1.53
 1.03 PlyA +  26642  26647    6                               1.05

 2.00 Prom +  30012  30051   40                              -3.86
 2.01 Sngl +  42267  42779  513  2  0   83   42   349 0.986  25.84
 2.02 PlyA +  43800  43805    6                               1.05

 3.00 Prom +  51811  51850   40                              -2.76
 3.01 Init +  81902  82003  102  1  0   88   70    85 0.009   5.30
 3.02 Intr +  85381  85469   89  0  2   43   68    31 0.002  -4.63
 3.03 Intr +  89165  89353  189  2  0  116   75   271 0.054  27.30
 3.04 Intr +  89477  89588  112  2  1  111   68    68 0.999   7.48
 3.05 Term +  91019  91282  264  1  0  128   54   228 0.999  18.91
 3.06 PlyA +  92587  92592    6                               1.05

 4.00 Prom +  93031  93070   40                              -1.76
 4.01 Init +  99907 100620  714  0  0   62   82  1284 0.422 118.08
 4.02 Intr + 112720 112878  159  0  0  134   95    99 0.990  15.38
 4.03 Term + 113072 113521  450  1  0  107   46   640 0.992  56.89
 4.04 PlyA + 115099 115104    6                               1.05

 5.19 PlyA - 115809 115804    6                               1.05
 5.18 Term - 117597 117193  405  0  0   87   47   420 0.905  32.99
 5.17 Intr - 128704 128587  118  0  1  118   89   210 0.989  24.57
 5.16 Intr - 135089 134921  169  0  1   44   62   222 0.591  14.20
 5.15 Intr - 138945 138711  235  0  1   63    6   163 0.297   2.86
 5.14 Intr - 153256 153108  149  2  2   25    9   166 0.000   2.35
 5.13 Intr - 171609 171525   85  0  1  111  105    39 0.972   7.29
 5.12 Intr - 174113 173977  137  0  2   96   82    91 0.817   9.59
 5.11 Intr - 175094 174930  165  0  0   67  119   197 0.968  20.63
 5.10 Intr - 179804 179685  120  0  0   50   56   171 0.758  10.57
 5.09 Intr - 180752 180609  144  0  0  134  110   131 0.999  20.15
 5.08 Intr - 181413 181316   98  2  2  100  109    94 0.400  12.35
 5.07 Intr - 186723 186580  144  2  0   70   55    60 0.394   0.30
 5.06 Intr - 189919 189787  133  2  1   43   43   177 0.650   8.40
 5.05 Intr - 204722 204695   28  2  1  128  115    25 0.573   6.89
 5.04 Intr - 205635 205461  175  2  1   34   86   126 0.175   6.94
 5.03 Intr - 206714 206326  389  2  2   84   43   153 0.149   3.99
 5.02 Intr - 207457 207386   72  1  0  147   65    -6 0.825   2.60
 5.01 Init - 210872 210774   99  2  0   78   75    49 0.609   2.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  31199  31262   64  1  1   80   82    87 0.873   8.61
S.002 Term -  47234  47167   68  0  2   94   49    67 0.850   1.50
S.003 Intr -  81882  81757  126  1  0  109   -1    99 0.855   3.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:19565848_19779365|GENSCAN_predicted_peptide_1|128_aa
MSSNQDLWINGSPGGLNMFLKEAREIKIDEGATKLGKIFVSGKNLPGPFRKLKGEGGLSQ
SHCLSAYASHGVGLFDLIGIPQSCYIIYSEYMTSSSLTGKSKHYPNEILADTYQTGNNTK
VSLQPNCW

>gi568815597f:19565848_19779365|GENSCAN_predicted_CDS_1|387_bp
atgtcttccaaccaggacctctggatcaatggtagtcctggtggtctaaacatgttcttg
aaagaagcaagagaaatcaagattgacgaaggagcaacaaagcttggaaagatatttgtc
tctgggaagaatcttccaggccctttcaggaagttgaagggagaaggtggtctttctcag
agccactgcttgagcgcttatgcatcccatggtgtgggcctctttgatttgattggaatc
ccccagtcctgctacattatatattcagagtacatgactagtagctcactcacaggaaag
agcaagcactaccccaatgagatactagcagacacctaccagactggcaacaatactaaa
gtatcattacagcctaactgttggtga

>gi568815597f:19565848_19779365|GENSCAN_predicted_peptide_2|170_aa
MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM
KVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRATGGNRTKTLGPGAQSALRALA
CSGMKIGRIEDVTPIPSDSTLRKGVTVVAVCEQDSSKYFLLINCLHVKNK

>gi568815597f:19565848_19779365|GENSCAN_predicted_CDS_2|513_bp
atggcacctggaaaggggaaggaaaagaaggaagaacaggtcatcaacctcggacctcag
gtggctgaaggggagaatgtatttggtgtctgccatatctttgcatccttcaatgacact
tttgtccatgtcacggatctttctggcaaacaaaccatctgccgtgtgactggtgggatg
aaggtgaaggcagaccgagatgaatcctcgccatatgctgctatgttgaccacccaggat
gtggcccagaggtgcaaggagctgggtatcattgccctacacatccaactccgggccaca
ggaggaaataggaccaagacccttggacctggggcccagtcggccctcagagcccttgcc
tgctcgggtatgaagatcgggaggattgaggacgtcacccccatcccctctgacagcact
ctcaggaagggggtcaccgtggtcgccgtctgtgaacaagattcctcaaaatattttctg
ttaataaattgccttcatgtaaaaaataaataa

>gi568815597f:19565848_19779365|GENSCAN_predicted_peptide_3|251_aa
MGRESPALSTEDLSALPSTALHRVVAGTGNRKGLGEPGENAGAPRCWPGEAEAPAPCGEP
ARAWALEATGMMLRVLVGAVLPAMLLAAPPPINKLALFPDKSAWCEAKNITQIVGHSGCE
AKSIQNRACLGQCFSYSVPNTFPQSTESLVHCDSCMPAQSMWEIVTLECPGHEEVPRVDK
LVEKILHCSCQACGKEPSHEGLSVYVQGEDGPGSQPGTHPHPHPHPHPGGQTPEPEDPPG
APHTEEEGAED

>gi568815597f:19565848_19779365|GENSCAN_predicted_CDS_3|756_bp
atggggagggagagccctgccctttccaccgaggatttgtcagccctgccctccacggct
ctgcaccgagtggttgctggaaccggtaacaggaaaggcctgggggagcccggggaaaat
gctggagctccacgctgctggcccggggaggccgaggccccagcgccctgcggagagcct
gctagggcctgggctctggaggccacgggcatgatgcttcgggtcctggtgggggctgtc
ctccctgccatgctactggctgccccaccacccatcaacaagctggcactgttcccagat
aagagtgcctggtgcgaagccaagaacatcacccagatcgtgggccacagcggctgtgag
gccaagtccatccagaacagggcgtgcctaggacagtgcttcagctacagcgtccccaac
accttcccacagtccacagagtccctggttcactgtgactcctgcatgccagcccagtcc
atgtgggagattgtgacgctggagtgcccgggccacgaggaggtgcccagggtggacaag
ctggtggagaagatcctgcactgtagctgccaggcctgcggcaaggagcctagtcacgag
gggctgagcgtctatgtgcagggcgaggacgggccgggatcccagcccggcacccaccct
cacccccatccccacccccatcctggcgggcagacccctgagcccgaggacccccctggg
gccccccacacagaggaagagggggctgaggactga

>gi568815597f:19565848_19779365|GENSCAN_predicted_peptide_4|440_aa
MVPEPGPTANSTPAWGAGPPSAPGGSGWVAAALCVVIALTAAANSLLIALICTQPALRNT
SNFFLVSLFTSDLMVGLVVMPPAMLNALYGRWVLARGLCLLWTAFDVMCCSASILNLCLI
SLDRYLLILSPLRYKLRMTPLRALALVLGAWSLAALASFLPLLLGWHELGHARPPVPGQC
RLLASLPFVLVASGLTFFLPSGAICFTYCRILLAARKQAVQVASLTTGMASQASETLQVP
RTPRPGVESADSRRLATKHSRKALKASLTLGILLGMFFVTWLPFFVANIVQAVCDCISPG
LFDVLTWLGYCNSTMNPIIYPLFMRDFKRALGRFLPCPRCPRERQASLASPSLRTSHSGP
RPGLSLQQVLPLPLPPDSDSDSDAGSGGSSGLRLTAQLLLPGEATQDPPLPTRAAAAVNF
FNIDPAEPELRPHPLGIPTN

>gi568815597f:19565848_19779365|GENSCAN_predicted_CDS_4|1323_bp
atggtcccagagccgggcccaaccgccaatagcaccccggcctggggggcagggccgccg
tcggccccggggggcagcggctgggtggcggccgcgctgtgcgtggtcatcgcgctgacg
gcggcggccaactcgctgctgatcgcgctcatctgcactcagcccgcgctgcgcaacacg
tccaacttcttcctggtgtcgctcttcacgtctgacctgatggtggggctggtggtgatg
ccgccggccatgctgaacgcgctgtacgggcgctgggtgctggcgcgcggcctctgcctg
ctctggaccgccttcgacgtgatgtgctgcagcgcctccatcctcaacctctgcctcatc
agcctggaccgctacctgctcatcctctcgccgctgcgctacaagctgcgcatgacgccc
ctgcgtgccctggccctagtcctgggcgcctggagcctcgccgctctcgcctccttcctg
cccctgctgctgggctggcacgagctgggccacgcacggccacccgtccctggccagtgc
cgcctgctggccagcctgccttttgtccttgtggcgtcgggcctcaccttcttcctgccc
tcgggtgccatatgcttcacctactgcaggatcctgctagctgcccgcaagcaggccgtg
caggtggcctccctcaccaccggcatggccagtcaggcctcggagacgctgcaggtgccc
aggaccccacgcccaggggtggagtctgctgacagcaggcgtctagccacgaagcacagc
aggaaggccctgaaggccagcctgacgctgggcatcctgctgggcatgttctttgtgacc
tggttgcccttctttgtggccaacatagtccaggccgtgtgcgactgcatctccccaggc
ctcttcgatgtcctcacatggctgggttactgtaacagcaccatgaaccccatcatctac
ccactcttcatgcgggacttcaagcgggcgctgggcaggttcctgccatgtccacgctgt
ccccgggagcgccaggccagcctggcctcgccatcactgcgcacctctcacagcggcccc
cggcccggccttagcctacagcaggtgctgccgctgcccctgccgccggactcagattcg
gactcagacgcaggctcaggcggctcctcgggcctgcggctcacggcccagctgctgctt
cctggcgaggccacccaggaccccccgctgcccaccagggccgctgccgccgtcaatttc
ttcaacatcgaccccgcggagcccgagctgcggccgcatccacttggcatccccacgaac
tga

>gi568815597f:19565848_19779365|GENSCAN_predicted_peptide_5|954_aa
MGDEFCQPGRRGWGITVSEKLLATPSKRVIVRRGVDPKGSPNHLISGQLPRNPTVTVRWL
CQKSGVDSAIIPPNALGSPPLCLSSKASFSPRAAPSHPPLGTPVGLHSDAHYGQRLAVAV
HVEGTLPFTSSTFAAASVFQKARPWQHPGEQMAFSGKPFLVAAVTSAGGSGAPSVGCTEL
ISTSVLGSFCTEFMAGLVQWLELSEAVLPTMTAFASGLGGEGADVFVQILLKDPILKDDP
TVITQDLLSFSLKDGHYDARARVLVCHMTSLLQVPLEELDVLEEMFLESLKEIKEEESDT
KKSDLKTEGGGEDKDRKHPLMGDKMTESKTDLWIYEMGNAGVLLFRRMAEASRKKKENRR
KWKRYLLIGLATVGGGTVIGVTGGLAAPLVAAGAATIIGSAGAAALGSAAGIAIMTSLFG
AAGAGLTGYKMKKRVGAIEEFTFLPLTEGRQLHITIAVTGWLASGKYRTFSAPWAALAHS
REQYCLAWEAKYLMELGNALETILSGLANMVAQEALKYTVLSGIVAALTWPASLLSVANV
IDNPWGVCLHRSAEVGKHLAHILLSRQQGRRPVTLIGFSLGARVIYFCLQEMAQEKEMCQ
EGCSSDFFRTQIGANDLFSFDEYRGTWKLQLGGESQVGFSFEWFYVVFLKLSCPWILTVA
QECCYYHRWPQGVPALQAAAPRLEKQSQLLAGQTLPGREGALNGRPPEKAAELMVIPGST
TIWHSPNVARDTDGLFWGLLPDCQGIIEDVILLGAPVEGEAKHWEPFRKVVSGRIINGYC
RGDWLLSFVYRTSSVQLRVAGLQPVLLQDRRVENVDLTSVVSGHLDYAKQMDAILKAVGI
RTKPGWDEKGLLLAPGCLPSEEPRQAAAAASSGETPHQVGQTQGPISGDTSKLAMSTDPS
QAQVPVGLDQSEGASLPAAASPERPPICSHGMDPNPLGCPDCACKTQGPSTGLD

>gi568815597f:19565848_19779365|GENSCAN_predicted_CDS_5|2865_bp
atgggagatgagttctgccagccaggaagaaggggctggggaattactgtttcagagaag
ctgttggcaacaccatccaagagggtgattgtaaggaggggtgttgatcccaaggggagc
cctaatcatctcatttcagggcagcttcccaggaacccgaccgtaacagtgaggtggctg
tgtcagaagtctggtgtggactctgccatcatccccccaaatgctctgggctccccacct
ctgtgtctcagctcaaaggcttccttctcccctagagcggccccatcccatcctcccctg
gggactcctgtaggactgcactcagatgcccactatggacagagactggcggtggcagtg
cacgtggagggcactcttcccttcacttcttccacttttgcagcagccagcgttttccag
aaagcacgtccttggcagcatccaggagagcagatggccttctctgggaagccttttctg
gtggctgccgtcacttctgcaggtggatccggggctccctctgtgggctgcactgaactg
atctccacctctgtcctaggctccttctgcacagagttcatggcaggcctggtgcagtgg
ctggagttgtctgaagctgtcttgccaaccatgactgcttttgcgagcggcctgggaggt
gaaggagcagatgtgtttgttcaaattttactgaaggaccccatcttgaaggacgacccg
acggtgatcactcaggaccttctgagcttctcactcaaggatgggcactatgacgcccgg
gccagagtcctcgtttgccacatgacctccctgctccaagtgcccttggaggagctggat
gtccttgaagagatgttcctggagagcctgaaggaaatcaaagaagaggaatctgacaca
aaaaaaagtgatttaaaaacagaaggtggtggtgaggataaggacagaaaacaccctctt
atgggagataagatgacagagagtaagaccgatttatggatctatgagatgggcaatgcg
ggcgtcttgctcttcaggagaatggccgaggcatcccgaaagaagaaagaaaaccggagg
aaatggaagcgttatctcctgataggcctggcgactgtcggaggcggaacggtgatcggt
gtgactggaggtctagctgcaccccttgttgccgctggagcagcgacgattattggcagc
gccggggcagcggctctgggctcagcagccggcatagccatcatgacctcgctgtttggt
gcagctggagctggcctgacaggatacaagatgaagaagcgagtgggagccattgaagag
ttcacgtttctgcctctgacggagggcaggcagctgcacatcaccatcgccgtcacgggg
tggctcgcttctggcaaataccgcaccttcagtgccccgtgggctgccctggcccacagc
cgtgagcagtactgcctggcctgggaagccaagtacctgatggagctcggcaatgccctg
gagaccatcctcagtggtctcgccaacatggtggcccaggaggccctaaagtacacagtg
ttgtctggcattgtggctgccctgacctggccagcctcactcctcagtgtcgccaatgtc
atcgacaacccctggggggtgtgtctccatcgatcagcagaggttggcaagcacctggcc
cacatcctgctctcccggcagcaggggcgacgacctgtcaccttgattggcttcagcctg
ggagccagagtcatctacttctgtctgcaggagatggctcaagagaaagagatgtgtcag
gaaggctgcagcagcgacttcttcagaacccagattggagctaatgatctcttcagcttt
gatgagtaccggggtacttggaagttacaactaggtggcgagtctcaagttggattttcg
tttgagtggttttacgttgttttcctgaagctcagctgtccgtggatcctgactgtggct
caggaatgctgctattaccaccgctggccacaaggggtcccagccctgcaggcagccgca
ccaaggctcgaaaagcagtcccagctcttagcagggcagactctgccaggcagagaaggc
gccctgaatggccggcccccagagaaagctgctgagctcatggttatccctgggtccaca
accatttggcactcacccaatgtggccagggacactgacggccttttctggggtcttttg
ccagattgccaaggaatcatcgaggacgtcatcctgctgggtgcgcctgtggagggagaa
gccaagcattgggagcctttccggaaggtggtgtccgggaggatcatcaacggctactgc
aggggagactggctgctgagtttcgtgtaccgcacatcctcggtgcagctccgtgtcgcc
ggcctacagcccgtgctgctgcaggacaggagggtggagaacgtggacctgacctctgtg
gtcagcggccacctggactatgccaagcagatggatgccatcctgaaggccgtgggcatc
cgcaccaagccaggctgggacgagaaggggctcttgctggccccaggctgcctgccctcc
gaggagcctcgccaggcagcagctgccgcctcatcaggcgagaccccccaccaggttggg
caaacccagggtcccatatccggagacacctccaaattggccatgtccacagaccccagc
caagcccaggtgccagtagggctggaccagtctgaaggggcctcccttcctgctgctgcc
agccctgaaaggccccccatctgcagccatggcatggaccccaacccactgggctgcccc
gattgtgcctgcaagacccagggccccagcacggggctggactga