Result of FASTA (omim) for pF1KB6522
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6522, 387 aa
  1>>>pF1KB6522 387 - 387 aa - 387 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.3952+/-0.000401; mu= 17.4912+/- 0.025
 mean_var=96.2942+/-20.584, 0's: 0 Z-trim(112.3): 114  B-trim: 176 in 1/52
 Lambda= 0.130700
 statistics sampled from 21113 (21240) to 21113 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.249), width:  16
 Scan time:  8.380

The best scores are:                                      opt bits E(85289)
XP_016856915 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3  2e-139
XP_016856914 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3  2e-139
XP_011539866 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3  2e-139
XP_016856916 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3  2e-139
XP_006710741 (OMIM: 614904) PREDICTED: sorting nex ( 387) 2565 494.3  2e-139
NP_057060 (OMIM: 614904) sorting nexin-7 isoform a ( 451) 2565 494.4 2.2e-139
XP_016856917 (OMIM: 614904) PREDICTED: sorting nex ( 336) 2045 396.2 5.9e-110
XP_006710740 (OMIM: 614904) PREDICTED: sorting nex ( 422) 2045 396.3  7e-110
NP_689424 (OMIM: 614904) sorting nexin-7 isoform b ( 396) 1570 306.7 6.1e-83
NP_003785 (OMIM: 605931) sorting nexin-4 [Homo sap ( 450)  330 73.0 1.6e-12
NP_683758 (OMIM: 601272) sorting nexin-1 isoform b ( 457)  313 69.8 1.5e-11
NP_001265128 (OMIM: 605929) sorting nexin-2 isofor ( 402)  307 68.6   3e-11
NP_003091 (OMIM: 605929) sorting nexin-2 isoform 1 ( 519)  307 68.7 3.6e-11
XP_005254668 (OMIM: 601272) PREDICTED: sorting nex ( 399)  300 67.3 7.5e-11
NP_003090 (OMIM: 601272) sorting nexin-1 isoform a ( 522)  293 66.0 2.3e-10
NP_001229862 (OMIM: 601272) sorting nexin-1 isofor ( 557)  293 66.1 2.4e-10
NP_003786 (OMIM: 605930) sorting nexin-3 isoform a ( 162)  245 56.5 5.3e-08
XP_016862903 (OMIM: 605931) PREDICTED: sorting nex ( 482)  243 56.6 1.5e-07
NP_037478 (OMIM: 300883) sorting nexin-12 isoform  ( 162)  236 54.8 1.7e-07
NP_001243114 (OMIM: 300883) sorting nexin-12 isofo ( 162)  236 54.8 1.7e-07
NP_001243117 (OMIM: 300883) sorting nexin-12 isofo ( 158)  217 51.2   2e-06
NP_001287858 (OMIM: 605930) sorting nexin-3 isofor ( 140)  213 50.4 3.1e-06
XP_011522999 (OMIM: 614906) PREDICTED: sorting nex ( 270)  202 48.6 2.1e-05
NP_037455 (OMIM: 614906) sorting nexin-11 isoform  ( 270)  202 48.6 2.1e-05
NP_689450 (OMIM: 614906) sorting nexin-11 isoform  ( 270)  202 48.6 2.1e-05
XP_005257317 (OMIM: 614906) PREDICTED: sorting nex ( 270)  202 48.6 2.1e-05
XP_005257319 (OMIM: 614906) PREDICTED: sorting nex ( 262)  199 48.0   3e-05
NP_001317249 (OMIM: 614906) sorting nexin-11 isofo ( 262)  199 48.0   3e-05
NP_689413 (OMIM: 605937) sorting nexin-5 isoform a ( 404)  179 44.4 0.00056
NP_055241 (OMIM: 605937) sorting nexin-5 isoform a ( 404)  179 44.4 0.00056
XP_016867573 (OMIM: 614905) PREDICTED: sorting nex ( 412)  172 43.1  0.0014
XP_016867572 (OMIM: 614905) PREDICTED: sorting nex ( 412)  172 43.1  0.0014
XP_011513632 (OMIM: 614905) PREDICTED: sorting nex ( 451)  172 43.2  0.0015
XP_011513631 (OMIM: 614905) PREDICTED: sorting nex ( 457)  172 43.2  0.0015
NP_037453 (OMIM: 614905) sorting nexin-8 [Homo sap ( 465)  172 43.2  0.0015
NP_037454 (OMIM: 614780,615085) sorting nexin-10 i ( 201)  162 40.9  0.0031
XP_006715775 (OMIM: 614780,615085) PREDICTED: sort ( 201)  162 40.9  0.0031
NP_001305128 (OMIM: 614780,615085) sorting nexin-1 ( 201)  162 40.9  0.0031
NP_001186764 (OMIM: 614780,615085) sorting nexin-1 ( 201)  162 40.9  0.0031
NP_001186766 (OMIM: 614780,615085) sorting nexin-1 ( 198)  161 40.7  0.0035
XP_016867575 (OMIM: 614780,615085) PREDICTED: sort ( 227)  161 40.8  0.0039
NP_001305127 (OMIM: 614780,615085) sorting nexin-1 ( 227)  161 40.8  0.0039
XP_016867574 (OMIM: 614780,615085) PREDICTED: sort ( 227)  161 40.8  0.0039
XP_016867576 (OMIM: 614780,615085) PREDICTED: sort ( 227)  161 40.8  0.0039
XP_011534188 (OMIM: 605952) PREDICTED: sorting nex ( 501)  160 41.0  0.0078
XP_005267072 (OMIM: 605952) PREDICTED: sorting nex ( 588)  160 41.0  0.0087
NP_057308 (OMIM: 605952) sorting nexin-9 [Homo sap ( 595)  160 41.0  0.0088


>>XP_016856915 (OMIM: 614904) PREDICTED: sorting nexin-7  (387 aa)
 initn: 2565 init1: 2565 opt: 2565  Z-score: 2624.1  bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)

               10        20        30        40        50        60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
              310       320       330       340       350       360

              370       380       
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::
XP_016 EQCLATWESFLTSQTNLHLEEASEDKP
              370       380       

>>XP_016856914 (OMIM: 614904) PREDICTED: sorting nexin-7  (387 aa)
 initn: 2565 init1: 2565 opt: 2565  Z-score: 2624.1  bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)

               10        20        30        40        50        60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
              310       320       330       340       350       360

              370       380       
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::
XP_016 EQCLATWESFLTSQTNLHLEEASEDKP
              370       380       

>>XP_011539866 (OMIM: 614904) PREDICTED: sorting nexin-7  (387 aa)
 initn: 2565 init1: 2565 opt: 2565  Z-score: 2624.1  bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)

               10        20        30        40        50        60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
              310       320       330       340       350       360

              370       380       
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::
XP_011 EQCLATWESFLTSQTNLHLEEASEDKP
              370       380       

>>XP_016856916 (OMIM: 614904) PREDICTED: sorting nexin-7  (387 aa)
 initn: 2565 init1: 2565 opt: 2565  Z-score: 2624.1  bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)

               10        20        30        40        50        60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
              310       320       330       340       350       360

              370       380       
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::
XP_016 EQCLATWESFLTSQTNLHLEEASEDKP
              370       380       

>>XP_006710741 (OMIM: 614904) PREDICTED: sorting nexin-7  (387 aa)
 initn: 2565 init1: 2565 opt: 2565  Z-score: 2624.1  bits: 494.3 E(85289): 2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:1-387)

               10        20        30        40        50        60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
              310       320       330       340       350       360

              370       380       
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::
XP_006 EQCLATWESFLTSQTNLHLEEASEDKP
              370       380       

>>NP_057060 (OMIM: 614904) sorting nexin-7 isoform a [Ho  (451 aa)
 initn: 2565 init1: 2565 opt: 2565  Z-score: 2623.3  bits: 494.4 E(85289): 2.2e-139
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:65-451)

                                             10        20        30
pF1KB6                               MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
                                     ::::::::::::::::::::::::::::::
NP_057 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
           40        50        60        70        80        90    

               40        50        60        70        80        90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
          100       110       120       130       140       150    

              100       110       120       130       140       150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
          160       170       180       190       200       210    

              160       170       180       190       200       210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
          220       230       240       250       260       270    

              220       230       240       250       260       270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
          280       290       300       310       320       330    

              280       290       300       310       320       330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
          340       350       360       370       380       390    

              340       350       360       370       380       
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
          400       410       420       430       440       450 

>>XP_016856917 (OMIM: 614904) PREDICTED: sorting nexin-7  (336 aa)
 initn: 2199 init1: 2045 opt: 2045  Z-score: 2095.0  bits: 396.2 E(85289): 5.9e-110
Smith-Waterman score: 2101; 86.8% identity (86.8% similar) in 387 aa overlap (1-387:1-336)

               10        20        30        40        50        60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFIVKGMVERFNDDFIETRRKA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQGPGLLSRMGQTVRAVASSMRGVK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHILWSASEEDLVD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 VLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYY
       :::::::::::                                                 
XP_016 VLTYKKADTDL-------------------------------------------------
              310                                                  

              370       380       
pF1KB6 EQCLATWESFLTSQTNLHLEEASEDKP
         :::::::::::::::::::::::::
XP_016 --CLATWESFLTSQTNLHLEEASEDKP
               320       330      

>>XP_006710740 (OMIM: 614904) PREDICTED: sorting nexin-7  (422 aa)
 initn: 2199 init1: 2045 opt: 2045  Z-score: 2093.8  bits: 396.3 E(85289): 7e-110
Smith-Waterman score: 2101; 86.8% identity (86.8% similar) in 387 aa overlap (1-387:87-422)

                                             10        20        30
pF1KB6                               MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
                                     ::::::::::::::::::::::::::::::
XP_006 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
         60        70        80        90       100       110      

               40        50        60        70        80        90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
        120       130       140       150       160       170      

              100       110       120       130       140       150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
        180       190       200       210       220       230      

              160       170       180       190       200       210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
        240       250       260       270       280       290      

              220       230       240       250       260       270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
        300       310       320       330       340       350      

              280       290       300       310       320       330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
       :::::::::::::::::::::::::::::::::::::::::                   
XP_006 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDL-------------------
        360       370       380       390                          

              340       350       360       370       380       
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
                                       :::::::::::::::::::::::::
XP_006 --------------------------------CLATWESFLTSQTNLHLEEASEDKP
                                       400       410       420  

>>NP_689424 (OMIM: 614904) sorting nexin-7 isoform b [Ho  (396 aa)
 initn: 1570 init1: 1570 opt: 1570  Z-score: 1610.1  bits: 306.7 E(85289): 6.1e-83
Smith-Waterman score: 2072; 85.8% identity (85.8% similar) in 387 aa overlap (1-387:65-396)

                                             10        20        30
pF1KB6                               MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
                                     ::::::::::::::::::::::::::::::
NP_689 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
           40        50        60        70        80        90    

               40        50        60        70        80        90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
          100       110       120       130       140       150    

              100       110       120       130       140       150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
       ::::                                                       :
NP_689 LIIP-------------------------------------------------------E
                                                                   

              160       170       180       190       200       210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
     160       170       180       190       200       210         

              220       230       240       250       260       270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
     220       230       240       250       260       270         

              280       290       300       310       320       330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
     280       290       300       310       320       330         

              340       350       360       370       380       
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
     340       350       360       370       380       390      

>>NP_003785 (OMIM: 605931) sorting nexin-4 [Homo sapiens  (450 aa)
 initn: 279 init1: 113 opt: 330  Z-score: 345.7  bits: 73.0 E(85289): 1.6e-12
Smith-Waterman score: 339; 25.7% identity (60.5% similar) in 296 aa overlap (29-312:55-345)

                 10        20        30        40             50   
pF1KB6   MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESH-----VTTIETFITYR
                                     :: . :.:.: :..     ..  ::. .: 
NP_003 AGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEISVSEAEKRTGRNAMNMQETYTAYL
           30        40        50        60        70        80    

            60          70        80        90          100        
pF1KB6 IITKTSRGEFDSSEFE--VRRRYQDFLWLKGKLEEAHPTLIIPPLPEK---FIVKGM-VE
       : :.. .    .: .   . :::..:  :.. :   .: ...::::::   :. . . ..
NP_003 IETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSAD
           90       100       110       120       130       140    

       110       120       130       140        150       160      
pF1KB6 RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQA-WELSSHKKQGPGLLSRMG
        .. ::.: :: .:..:: :::.:: :  .. : .::: .. :. . ..    :.  .  
NP_003 NMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNET---GFQLKAD
          150       160       170       180       190          200 

        170       180       190       200       210       220      
pF1KB6 QTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGP
       . ..:. ...: :::  ..: ..... . ... :. . ..  :.  .    .    .:: 
NP_003 SRLKALNATFR-VKNPDKRFTDLKHYSDELQSVISHLLRVRARVADRLYGVYKVHGNYGR
             210        220       230       240       250       260

        230       240       250       260       270       280      
pF1KB6 IHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMK
       .   ::: :... : :....  .:   .. .  .    :     ..::..:.: : .: .
NP_003 VFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILED-EEHYADQLKEYLFYAEALRAVCR
              270       280       290        300       310         

        290       300       310       320       330       340      
pF1KB6 RRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIK
       ... .: .:.  .. :. :: . . :                                  
NP_003 KHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETPEQREARIKVLE
     320       330       340       350       360       370         




387 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 04:20:03 2016 done: Sat Nov  5 04:20:05 2016
 Total Scan time:  8.380 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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