Result of FASTA (ccds) for pF1KB6522
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6522, 387 aa
  1>>>pF1KB6522 387 - 387 aa - 387 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7869+/-0.000975; mu= 14.8046+/- 0.058
 mean_var=82.6950+/-16.453, 0's: 0 Z-trim(105.2): 53  B-trim: 0 in 0/51
 Lambda= 0.141038
 statistics sampled from 8229 (8277) to 8229 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.627), E-opt: 0.2 (0.254), width:  16
 Scan time:  2.740

The best scores are:                                      opt bits E(32554)
CCDS755.2 SNX7 gene_id:51375|Hs108|chr1            ( 451) 2565 531.9 4.3e-151
CCDS756.2 SNX7 gene_id:51375|Hs108|chr1            ( 396) 1570 329.4 3.4e-90
CCDS43865.1 SNX30 gene_id:401548|Hs108|chr9        ( 437) 1274 269.2 4.9e-72
CCDS3032.1 SNX4 gene_id:8723|Hs108|chr3            ( 450)  330 77.2 3.4e-14
CCDS32268.1 SNX1 gene_id:6642|Hs108|chr15          ( 457)  313 73.7 3.7e-13
CCDS64234.1 SNX2 gene_id:6643|Hs108|chr5           ( 402)  307 72.4 7.9e-13
CCDS34217.1 SNX2 gene_id:6643|Hs108|chr5           ( 519)  307 72.5 9.7e-13
CCDS32266.1 SNX1 gene_id:6642|Hs108|chr15          ( 522)  293 69.7   7e-12
CCDS58371.1 SNX1 gene_id:6642|Hs108|chr15          ( 557)  293 69.7 7.4e-12


>>CCDS755.2 SNX7 gene_id:51375|Hs108|chr1                 (451 aa)
 initn: 2565 init1: 2565 opt: 2565  Z-score: 2826.1  bits: 531.9 E(32554): 4.3e-151
Smith-Waterman score: 2565; 100.0% identity (100.0% similar) in 387 aa overlap (1-387:65-451)

                                             10        20        30
pF1KB6                               MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
                                     ::::::::::::::::::::::::::::::
CCDS75 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
           40        50        60        70        80        90    

               40        50        60        70        80        90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
          100       110       120       130       140       150    

              100       110       120       130       140       150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
          160       170       180       190       200       210    

              160       170       180       190       200       210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
          220       230       240       250       260       270    

              220       230       240       250       260       270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
          280       290       300       310       320       330    

              280       290       300       310       320       330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
          340       350       360       370       380       390    

              340       350       360       370       380       
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
          400       410       420       430       440       450 

>>CCDS756.2 SNX7 gene_id:51375|Hs108|chr1                 (396 aa)
 initn: 1570 init1: 1570 opt: 1570  Z-score: 1732.8  bits: 329.4 E(32554): 3.4e-90
Smith-Waterman score: 2072; 85.8% identity (85.8% similar) in 387 aa overlap (1-387:65-396)

                                             10        20        30
pF1KB6                               MDMNSFSPMMPTSPLSMINQIKFEDEPDLK
                                     ::::::::::::::::::::::::::::::
CCDS75 SGSSALLQAEVLDLDEDEDDLEVFSKDASLMDMNSFSPMMPTSPLSMINQIKFEDEPDLK
           40        50        60        70        80        90    

               40        50        60        70        80        90
pF1KB6 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DLFITVDEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT
          100       110       120       130       140       150    

              100       110       120       130       140       150
pF1KB6 LIIPPLPEKFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE
       ::::                                                       :
CCDS75 LIIP-------------------------------------------------------E
                                                                   

              160       170       180       190       200       210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
     160       170       180       190       200       210         

              220       230       240       250       260       270
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YKEEREYFDEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPV
     220       230       240       250       260       270         

              280       290       300       310       320       330
pF1KB6 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VHEYVLYSEMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNAL
     280       290       300       310       320       330         

              340       350       360       370       380       
pF1KB6 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 KADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
     340       350       360       370       380       390      

>>CCDS43865.1 SNX30 gene_id:401548|Hs108|chr9             (437 aa)
 initn: 1244 init1: 608 opt: 1274  Z-score: 1406.7  bits: 269.2 E(32554): 4.9e-72
Smith-Waterman score: 1274; 49.3% identity (81.5% similar) in 363 aa overlap (11-371:68-427)

                                   10        20          30        
pF1KB6                     MDMNSFSPMMPTSPLSMINQIKFEDEPD--LKDLFITVDE
                                     :.:  :..:.....:. :   .:::. ::.
CCDS43 TPSPDLLMARSFGDKDLILPNGGTPAGTSSPASSSSLLNRLQLDDDIDGETRDLFVIVDD
        40        50        60        70        80        90       

       40        50        60        70        80        90        
pF1KB6 PESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPE
       :..:: :.::.::::: ::..: :::  :. :::::::: ::..::::..:: .::::::
CCDS43 PKKHVCTMETYITYRITTKSTRVEFDLPEYSVRRRYQDFDWLRSKLEESQPTHLIPPLPE
       100       110       120       130       140       150       

      100       110       120       130       140       150        
pF1KB6 KFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWELSSHKKQG
       ::.:::.:.::...:.::::::: :::.::.:::.:.::: :.:::::.  .:...::::
CCDS43 KFVVKGVVDRFSEEFVETRRKALDKFLKRITDHPVLSFNEHFNIFLTAK--DLNAYKKQG
       160       170       180       190       200         210     

      160       170       180       190       200       210        
pF1KB6 PGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYF
        .::.:::..:. :..... ...:: ::  ...... :. :.. ::.:.::: ::: ::.
CCDS43 IALLTRMGESVKHVTGGYK-LRTRPLEFAAIGDYLDTFALKLGTIDRIAQRIIKEEIEYL
         220       230        240       250       260       270    

      220       230       240       250       260       270        
pF1KB6 DEMKEYGPIHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYS
        :..::::..  ::: : .:.. :. :..::  :  : :.  . ..: .:::..::.:::
CCDS43 VELREYGPVYSTWSALEGELAEPLEGVSACIGNCSTALEELTDDMTEDFLPVLREYILYS
          280       290       300       310       320       330    

      280       290       300       310       320       330        
pF1KB6 EMLMGVMKRRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWK
       . . .:.:.:::.::: ..:.:... .: :   .: .. : .:..:: :  :::: :::.
CCDS43 DSMKSVLKKRDQVQAEYEAKLEAVALRKEDRPKVPADVEKCQDRMECFNADLKADMERWQ
          340       350       360       370       380       390    

      340       350       360       370       380       
pF1KB6 QNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP
       .: ..:..  .  ::..::.:::.:: .:::..                
CCDS43 NNKRQDFRQLLMGMADKNIQYYEKCLMAWESIIPLLQEKQEAK      
          400       410       420       430             

>>CCDS3032.1 SNX4 gene_id:8723|Hs108|chr3                 (450 aa)
 initn: 279 init1: 113 opt: 330  Z-score: 368.4  bits: 77.2 E(32554): 3.4e-14
Smith-Waterman score: 339; 25.7% identity (60.5% similar) in 296 aa overlap (29-312:55-345)

                 10        20        30        40             50   
pF1KB6   MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESH-----VTTIETFITYR
                                     :: . :.:.: :..     ..  ::. .: 
CCDS30 AGLGAAVGKEAEGAGEESSGVDTMTHNNFWLKKIEISVSEAEKRTGRNAMNMQETYTAYL
           30        40        50        60        70        80    

            60          70        80        90          100        
pF1KB6 IITKTSRGEFDSSEFE--VRRRYQDFLWLKGKLEEAHPTLIIPPLPEK---FIVKGM-VE
       : :.. .    .: .   . :::..:  :.. :   .: ...::::::   :. . . ..
CCDS30 IETRSVEHTDGQSVLTDSLWRRYSEFELLRSYLLVYYPHIVVPPLPEKRAEFVWHKLSAD
           90       100       110       120       130       140    

       110       120       130       140        150       160      
pF1KB6 RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQA-WELSSHKKQGPGLLSRMG
        .. ::.: :: .:..:: :::.:: :  .. : .::: .. :. . ..    :.  .  
CCDS30 NMDPDFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEGNWKETVNET---GFQLKAD
          150       160       170       180       190          200 

        170       180       190       200       210       220      
pF1KB6 QTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGP
       . ..:. ...: :::  ..: ..... . ... :. . ..  :.  .    .    .:: 
CCDS30 SRLKALNATFR-VKNPDKRFTDLKHYSDELQSVISHLLRVRARVADRLYGVYKVHGNYGR
             210        220       230       240       250       260

        230       240       250       260       270       280      
pF1KB6 IHILWSASEEDLVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMK
       .   ::: :... : :....  .:   .. .  .    :     ..::..:.: : .: .
CCDS30 VFSEWSAIEKEMGDGLQSAGHHMDVYASSIDDILED-EEHYADQLKEYLFYAEALRAVCR
              270       280       290        300       310         

        290       300       310       320       330       340      
pF1KB6 RRDQIQAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIK
       ... .: .:.  .. :. :: . . :                                  
CCDS30 KHELMQYDLEMAAQDLASKKQQCEELVTGTVRTFSLKGMTTKLFGQETPEQREARIKVLE
     320       330       340       350       360       370         

>>CCDS32268.1 SNX1 gene_id:6642|Hs108|chr15               (457 aa)
 initn: 213 init1: 109 opt: 313  Z-score: 349.6  bits: 73.7 E(32554): 3.7e-13
Smith-Waterman score: 325; 23.4% identity (56.2% similar) in 397 aa overlap (7-371:63-450)

                                       10        20        30      
pF1KB6                         MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITV
                                     . ..: .  :  : :. :.. . .:::   
CCDS32 EPEAGDSDTEGEDIFTGAAVVSKHQSPKITTSLLPINNGSKENGIHEEQDQEPQDLFAG-
             40        50        60        70        80        90  

         40        50        60        70        80        90      
pF1KB6 DEPESHVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT--LIIP
                ......:.. :.::   : :..: :.::..::: :  :: : :    .:.:
CCDS32 -------DGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVP
                    100       110       120       130       140    

          100         110            120       130       140       
pF1KB6 PLPEKFIVKGM--VERFNDD-----FIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQ
       : ::: .. ::  :.  ..:     :.: :: ::...:.::..:::.  . : . ::  .
CCDS32 PPPEKSLI-GMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKE
          150        160       170       180       190       200   

       150         160       170       180       190       200     
pF1KB6 AWE--LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDK
            ....  .: :::. ..... ::..    ...    : :  . .:   :..  .  
CCDS32 ELPRAVGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHA
           210       220       230       240       250       260   

         210       220       230         240       250       260   
pF1KB6 ISQRIYKEEREYFDEMKEYGPIHILWSASEED--LVDTLKDVASCIDRCCKATEKRMSGL
       . . . ....:   .  ...    . ..::..  :  .:...:   ..  .  ... .. 
CCDS32 VVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANND
           270       280       290       300       310       320   

           270       280       290        300       310            
pF1KB6 SEALLPVVHEYVLYSEMLMGVMKRRDQI-QAELDSKVEVLTYKKADTDLL----PEEIGK
          :  .. .:.    .. ... .: .  :   :... .   ..:.. ::    :... .
CCDS32 FFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQ
           330       340       350       360       370       380   

      320          330       340           350       360           
pF1KB6 LEDKV---ECANNALKADWERWKQNMQNDI----KLAFTDMAEENIHYYE------QCLA
        .:..   :   .  . :.:: .  .....    :    :. .. :.: :      : ::
CCDS32 AKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQLA
           390       400       410       420       430       440   

          370       380       
pF1KB6 T-WESFLTSQTNLHLEEASEDKP
         ::.::                
CCDS32 KYWEAFLPEAKAIS         
           450                

>>CCDS64234.1 SNX2 gene_id:6643|Hs108|chr5                (402 aa)
 initn: 327 init1: 163 opt: 307  Z-score: 343.8  bits: 72.4 E(32554): 7.9e-13
Smith-Waterman score: 355; 24.6% identity (58.7% similar) in 341 aa overlap (20-346:13-348)

               10        20        30        40        50        60
pF1KB6 MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETFITYRIITKTSR
                          .:. : . :. :. : :..::.    ......::. :::: 
CCDS64        MSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAYMAYRVTTKTSL
                      10        20        30        40        50   

               70        80          90       100              110 
pF1KB6 GEFDSSEFEVRRRYQDFLWLKGKLEEA--HPTLIIPPLPEKFIVKGMV-------ERFND
       . :..::: :.::..::: :..::     :   :.:: ::: :: ::.       .  . 
CCDS64 SMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIV-GMTKVKVGKEDSSST
            60        70        80        90        100       110  

             120       130       140       150         160         
pF1KB6 DFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE--LSSHKKQGPGLLSRMGQTV
       .:.: :: ::...:.: . ::::  . :.. :: ..     ....  .: :.:  .....
CCDS64 EFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALSGAGILRMVNKAA
            120       130       140       150       160       170  

     170       180       190       200       210       220         
pF1KB6 RAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYFDEMKEYGPIHI
        :: .    ...    : : .. .: ..:..  .    . .  ...:   .   ..    
CCDS64 DAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHVSVEALVCHRKELSANTAAFAKSAA
            180       190       200       210       220       230  

     230         240       250       260       270       280       
pF1KB6 LWSASEED--LVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVLYSEMLMGVMKR
       . . ::.   :  .:...:   ..  .  ...  .    .  .. .:.     . ::. .
CCDS64 MLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDH
            240       250       260       270       280       290  

       290        300       310       320       330       340      
pF1KB6 RDQI-QAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWERWKQNMQNDIK
       : .  :   :... .:  ..:.. ..   ...  ::.. :.: .. .::   :. . :..
CCDS64 RMKCWQKWEDAQITLLKKREAEAKMM---VANKPDKIQQAKNEIR-EWEAKVQQGERDFE
            300       310          320       330        340        

        350       360       370       380                    
pF1KB6 LAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP             
                                                             
CCDS64 QISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYWEAFLPEAKAIA
      350       360       370       380       390       400  

>>CCDS34217.1 SNX2 gene_id:6643|Hs108|chr5                (519 aa)
 initn: 327 init1: 163 opt: 307  Z-score: 342.2  bits: 72.5 E(32554): 9.7e-13
Smith-Waterman score: 355; 24.6% identity (58.7% similar) in 341 aa overlap (20-346:130-465)

                          10        20        30        40         
pF1KB6            MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPESHVTTIETF
                                     .:. : . :. :. : :..::.    ....
CCDS34 VTPVTPTTLIAPRIESKSMSAPVIFDRSREEIEEEANGDIFDIEIGVSDPEKVGDGMNAY
     100       110       120       130       140       150         

      50        60        70        80          90       100       
pF1KB6 ITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEA--HPTLIIPPLPEKFIVKGMV-
       ..::. :::: . :..::: :.::..::: :..::     :   :.:: ::: :: ::. 
CCDS34 MAYRVTTKTSLSMFSKSEFSVKRRFSDFLGLHSKLASKYLHVGYIVPPAPEKSIV-GMTK
     160       170       180       190       200       210         

              110       120       130       140       150          
pF1KB6 ------ERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE--LSSHKKQG
             .  . .:.: :: ::...:.: . ::::  . :.. :: ..     ....  .:
CCDS34 VKVGKEDSSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALSG
      220       230       240       250       260       270        

      160       170       180       190       200       210        
pF1KB6 PGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRIYKEEREYF
        :.:  ..... :: .    ...    : : .. .: ..:..  .    . .  ...:  
CCDS34 AGILRMVNKAADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHVSVEALVCHRKELS
      280       290       300       310       320       330        

      220       230         240       250       260       270      
pF1KB6 DEMKEYGPIHILWSASEED--LVDTLKDVASCIDRCCKATEKRMSGLSEALLPVVHEYVL
        .   ..    . . ::.   :  .:...:   ..  .  ...  .    .  .. .:. 
CCDS34 ANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIR
      340       350       360       370       380       390        

        280       290        300       310       320       330     
pF1KB6 YSEMLMGVMKRRDQI-QAELDSKVEVLTYKKADTDLLPEEIGKLEDKVECANNALKADWE
           . ::. .: .  :   :... .:  ..:.. ..   ...  ::.. :.: .. .::
CCDS34 LIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMM---VANKPDKIQQAKNEIR-EWE
      400       410       420       430          440       450     

         340       350       360       370       380               
pF1KB6 RWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLEEASEDKP        
          :. . :..                                                 
CCDS34 AKVQQGERDFEQISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYWEAFLPE
          460       470       480       490       500       510    

>>CCDS32266.1 SNX1 gene_id:6642|Hs108|chr15               (522 aa)
 initn: 267 init1: 145 opt: 293  Z-score: 326.8  bits: 69.7 E(32554): 7e-12
Smith-Waterman score: 355; 23.5% identity (57.4% similar) in 392 aa overlap (12-371:125-515)

                                  10        20        30        40 
pF1KB6                    MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPES
                                     ..:    .... :.. :  :: . . .::.
CCDS32 ELSLDSTQNNQKKVLAKTLISLPPQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEK
          100       110       120       130       140       150    

              50        60        70        80        90           
pF1KB6 HVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT--LIIPPLPEK
           ......:.. :.::   : :..: :.::..::: :  :: : :    .:.:: :::
CCDS32 IGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEK
          160       170       180       190       200       210    

     100         110            120       130       140       150  
pF1KB6 FIVKGM--VERFNDD-----FIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE--
        .. ::  :.  ..:     :.: :: ::...:.::..:::.  . : . ::  .     
CCDS32 SLI-GMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRA
           220       230       240       250       260       270   

              160       170       180       190       200       210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
       ....  .: :::. ..... ::..    ...    : :  . .:   :..  .  . . .
CCDS32 VGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETL
           280       290       300       310       320       330   

              220       230         240       250       260        
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEED--LVDTLKDVASCIDRCCKATEKRMSGLSEALL
        ....:   .  ...    . ..::..  :  .:...:   ..  .  ... ..    : 
CCDS32 VNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLA
           340       350       360       370       380       390   

      270       280       290        300       310           320   
pF1KB6 PVVHEYVLYSEMLMGVMKRRDQI-QAELDSKVEVLTYKKADTDLL----PEEIGKLEDKV
        .. .:.    .. ... .: .  :   :... .   ..:.. ::    :... . .:..
CCDS32 ELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEI
           400       410       420       430       440       450   

              330       340           350       360                
pF1KB6 ---ECANNALKADWERWKQNMQNDI----KLAFTDMAEENIHYYE------QCLAT-WES
          :   .  . :.:: .  .....    :    :. .. :.: :      : ::  ::.
CCDS32 LEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEA
           460       470       480       490       500       510   

     370       380       
pF1KB6 FLTSQTNLHLEEASEDKP
       ::                
CCDS32 FLPEAKAIS         
           520           

>>CCDS58371.1 SNX1 gene_id:6642|Hs108|chr15               (557 aa)
 initn: 267 init1: 145 opt: 293  Z-score: 326.4  bits: 69.7 E(32554): 7.4e-12
Smith-Waterman score: 346; 22.4% identity (58.1% similar) in 384 aa overlap (12-374:125-504)

                                  10        20        30        40 
pF1KB6                    MDMNSFSPMMPTSPLSMINQIKFEDEPDLKDLFITVDEPES
                                     ..:    .... :.. :  :: . . .::.
CCDS58 ELSLDSTQNNQKKVLAKTLISLPPQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEK
          100       110       120       130       140       150    

              50        60        70        80        90           
pF1KB6 HVTTIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPT--LIIPPLPEK
           ......:.. :.::   : :..: :.::..::: :  :: : :    .:.:: :::
CCDS58 IGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEK
          160       170       180       190       200       210    

     100         110            120       130       140       150  
pF1KB6 FIVKGM--VERFNDD-----FIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE--
        .. ::  :.  ..:     :.: :: ::...:.::..:::.  . : . ::  .     
CCDS58 SLI-GMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRA
           220       230       240       250       260       270   

              160       170       180       190       200       210
pF1KB6 LSSHKKQGPGLLSRMGQTVRAVASSMRGVKNRPEEFMEMNNFIELFSQKINLIDKISQRI
       ....  .: :::. ..... ::..    ...    : :  . .:   :..  .  . . .
CCDS58 VGTQTLSGAGLLKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETL
           280       290       300       310       320       330   

              220       230         240       250       260        
pF1KB6 YKEEREYFDEMKEYGPIHILWSASEED--LVDTLKDVASCIDRCCKATEKRMSGLSEALL
        ....:   .  ...    . ..::..  :  .:...:   ..  .  ... ..    : 
CCDS58 VNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLA
           340       350       360       370       380       390   

      270       280       290        300       310           320   
pF1KB6 PVVHEYVLYSEMLMGVMKRRDQI-QAELDSKVEVLTYKKADTDLL----PEEIGKLEDKV
        .. .:.    .. ... .: .  :   :... .   ..:.. ::    :... . .:..
CCDS58 ELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEI
           400       410       420       430       440       450   

              330       340       350       360       370       380
pF1KB6 ---ECANNALKADWERWKQNMQNDIKLAFTDMAEENIHYYEQCLATWESFLTSQTNLHLE
          :   .  . :.:: .  ..... . :    :..  . .. .   :..: ::      
CCDS58 LEWESRVTQYERDFERISTVVRKEV-IRFEK--EKSKDFKNHVIKYLETLLYSQQQAGEQ
           460       470        480         490       500       510

                                                      
pF1KB6 EASEDKP                                        
                                                      
CCDS58 LGIRSGILLTKKLPRYSKFFSTVHKFCAAASLWKWGFFLSAYLSYLF
              520       530       540       550       




387 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 04:20:03 2016 done: Sat Nov  5 04:20:03 2016
 Total Scan time:  2.740 Total Display time:  0.070

Function used was FASTA [36.3.4 Apr, 2011]
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