GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:10:25

Sequence gi568815582f:11865325_12067844 : 202520 bp : 45.49% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.15 PlyA -    244    239    6                               1.05
 1.14 Term -   7847   7795   53  0  2   73   47    55 0.397  -2.51
 1.13 Intr -  10605  10437  169  0  1   81   90    10 0.626   0.02
 1.12 Intr -  10851  10762   90  0  0   50   79    70 0.807   2.49
 1.11 Intr -  12256  12083  174  1  0   61   97   161 0.999  14.44
 1.10 Intr -  17852  17691  162  2  0    8  116   118 0.658   6.77
 1.09 Intr -  19950  19857   94  2  1   79   75    64 0.996   4.17
 1.08 Intr -  21287  21147  141  1  0   58  103    64 0.883   4.37
 1.07 Intr -  21607  21453  155  1  2   44   83    78 0.994   1.77
 1.06 Intr -  22406  22246  161  0  2   43   99   116 0.268   7.91
 1.05 Intr -  31461  31234  228  1  0   29   87   157 0.183   7.54
 1.04 Intr -  32557  32516   42  2  0   77   91    37 0.208   1.11
 1.03 Intr -  50382  50045  338  2  2   19   70   670 0.311  53.46
 1.02 Intr -  51056  50814  243  1  0   77   26   197 0.572   9.01
 1.01 Init -  56276  56188   89  2  2   72   90    40 0.785   2.74
 1.00 Prom -  57481  57442   40                              -5.06

 2.00 Prom +  58561  58600   40                              -2.66
 2.01 Init +  59947  59987   41  0  2   80   81    16 0.949  -0.22
 2.02 Intr +  60874  60980  107  1  2   93  101   162 0.984  17.86
 2.03 Term +  65909  66069  161  0  2   40   43   131 0.235   1.90
 2.04 PlyA +  66460  66465    6                              -3.44

 3.05 PlyA -  66923  66918    6                              -0.45
 3.04 Term -  68337  68189  149  1  2   47   44   184 0.965   7.96
 3.03 Intr -  68600  68501  100  2  1   69   86    64 0.973   3.98
 3.02 Intr -  72344  72216  129  2  0   82   92    32 0.931   3.89
 3.01 Init -  75919  75845   75  1  0   70   56   113 0.985   5.39
 3.00 Prom -  76358  76319   40                              -3.56

 4.00 Prom +  85974  86013   40                              -4.66
 4.01 Init + 102263 102519  257  1  2   75   59   214 0.816  13.90
 4.02 Intr + 111272 111489  218  2  2   11  101   102 0.372   1.95
 4.03 Intr + 112258 112361  104  2  2   83   90    49 0.356   4.49
 4.04 Intr + 112799 112841   43  1  1   53   81    22 0.196  -4.19
 4.05 Intr + 120231 120304   74  1  2   96   41    93 0.636   4.53
 4.06 Intr + 122400 122418   19  2  1  127   34    14 0.002  -3.92
 4.07 Intr + 124768 124851   84  2  0   78   89    25 0.005   1.39
 4.08 Intr + 133973 134034   62  0  2   40  115    81 0.022   4.45
 4.09 Intr + 137667 137719   53  2  2   77   99    79 0.016   5.61
 4.10 Intr + 161996 162120  125  2  2   85   84   103 0.729   9.83
 4.11 Intr + 177573 177753  181  1  1   77   94   441 0.975  42.53
 4.12 Intr + 181060 181130   71  1  2   71  115    34 0.554   3.23
 4.13 Intr + 183048 183296  249  1  0   80  105   245 0.463  22.81
 4.14 Intr + 186523 186898  376  2  1   89  100   522 0.756  47.57
 4.15 Intr + 196204 196322  119  1  2   83   94   130 0.760  13.21
 4.16 Term + 196606 196616   11  2  2   70   43     5 0.276  -7.44
 4.17 PlyA + 197055 197060    6                               1.05

 5.02 PlyA - 198048 198043    6                              -0.45
 5.01 Term - 199163 198970  194  0  2   68   47   221 0.956  13.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 201313 201088  226  1  1   84   61   100 0.919   4.92


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:11865325_12067844|GENSCAN_predicted_peptide_1|712_aa
MSHSAQLAIISLTHLQAFLIRILNREGFSSLCPAGQSGPLLWAKILSVFGPAQSCTNQGL
PLPPHQVTGGAAERPPDLRLLALPAGSRSRFRLRPVPELRLPSAPGKTAAGGGGGGGGGG
GGSSSGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAAFSRQLNVNAK
PFVPNVHAAEFVPSFLRGPAAPPPPVGGAANNHGAGSGAGGRAGSNSAVSMELSEPIVEN
GETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAP
KKEHVNVVFIGHVDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAS
QADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERY
EECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNF
NRSVDGPIRLPIVDKYKCRISLWAIELLYSTKKSETGFYFTFDQDMGTVVLGKLESGSIC
KGQQLVMMPNKHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLC
HSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFV
KQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD

>gi568815582f:11865325_12067844|GENSCAN_predicted_CDS_1|2139_bp
atgagccacagcgcccagctggctattatatctttaacacatctccaagctttcctcatc
cgcattttgaacagggagggcttcagcagcctgtgtccagcaggccagagtggacccctc
ctatgggctaaaatactctcggtcttcggcccagcacagagctgcaccaaccagggcctg
ccgctgcccccccaccaggtgacaggtggggccgccgagcggccaccagacctccgcctc
ctcgcgttgcctgccgggagccggagccgcttccggttgcgccctgtccctgaacttcga
ctcccgtcggcccccgggaaaaccgcagcgggtggcggcggcggcggcggcggcggcggc
ggcgggagcagcagcggcagcagcagcagcgactcggcgcctgactgctgggaccaggcg
gacatggaagcccccgggccgggcccttgcggcggcggcggctccctggcggcggcggcc
gaggcccagcgggagaacctcagcgcggccttcagccggcaactcaacgtcaacgccaag
cccttcgtgcccaacgtccacgccgccgagttcgtgccgtccttcctgcggggcccggca
gcgccgccacccccagttggcggcgccgccaataaccacggagccggcagcggcgcggga
ggccgtgcgggttcaaattcagctgttagcatggaactttcagaacctattgtagaaaat
ggagagacagaaatgtctccagaagaatcatgggagcacaaagaagaaataagtgaagca
gagccagggggtggttccttgggagatggaaggccgccagaggaaagtgcccatgaaatg
atggaggaggaagaggaaatcccaaaacctaagtctgtggttgcaccgccaggtgctcct
aagaaagagcatgtaaatgtagtattcattgggcacgtagacacaaatcaggaagaacga
gacaagggtaaaacagtagaagtgggtcgtgcctattttgaaaccgaaaagaagcatttc
acaattctagatgcccctggccacaagagttttgtcccaaatatgattggtggtgcctct
caagctgatttggctgtgctggtaatctcagccaggaaaggagagtttgaaactggattt
gaaaaaggaggacagacaagagaacatgcaatgttggcaaagacagcaggtgtaaaacac
ctaattgtgctaattaataagatggatgatccaacagtaaattggagcaatgagagatat
gaagaatgtaaggagaaactagtgccatttttgaaaaaagttggcttcaatcccaaaaag
gacattcactttatgccctgctcaggacttactggagcaaatctcaaagagcagtcggat
ttctgtccttggtacattggattaccgtttattccatatctggataatttgccgaacttc
aatagatcagttgatggaccaatcaggctgccaattgtggataagtacaagtgtagaatt
tcactttgggctattgagctgttatacagcaccaagaagtctgaaactggattttatttt
acatttgatcaggatatgggcactgtggtcctgggaaagctggaatcaggatctatttgt
aaaggccagcagcttgtgatgatgccaaacaagcacaacgtggaagttcttggaatactt
tccgatgatgtagagactgataccgtagccccaggtgaaaacctcaaaatcagactgaaa
ggaattgaagaagaggagattcttccagggtttatactttgtgatcctaataatctttgt
cattctggacgcacatttgatgcccagatagtgattatagagcacaaatccatcatctgc
ccaggctataatgcggtgctgcatattcatacctgtattgaggaggtggaaataacagcc
ttaatctgcttggtagacaaaaaatcaggagaaaaaagtaagacccgaccccgttttgtc
aaacaagatcaagtatgcattgctcgcttaaggacagcaggaaccatctgccttgagacc
tttaaagacttccctcagatgggtcgtttcaccttaagagatgagggtaagaccattgca
attggaaaagttctgaaactggttccagagaaagactaa

>gi568815582f:11865325_12067844|GENSCAN_predicted_peptide_2|102_aa
MKGGNPILREGVAWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQSVLCGDNGKPSTLVL
TDFNKVQFTEIEGRKRKRPKKGKFAVLPSHHLIHGPDPKDLT

>gi568815582f:11865325_12067844|GENSCAN_predicted_CDS_2|309_bp
atgaagggagggaatccaattttacgagagggtgtagcctggtgctgccatggccacgac
tgttgttacactcgagctgaggaggccggctgcagccccaagacagagcgctactcctgg
cagtgcgtcaatcagagcgtcctgtgcggtgacaacggcaaaccatccaccctggtgttg
actgactttaacaaggttcagttcacagagattgagggcagaaaaaggaaacggcctaaa
aagggtaagtttgctgtgttgccctcacaccacttgattcatggtcctgatcctaaggat
ctcacctga

>gi568815582f:11865325_12067844|GENSCAN_predicted_peptide_3|150_aa
MRVLWMLFWLLFWLLLEFISHQSTCVINTLADHHHRGTDFGGSPWLRIIIAFPRSYKVVL
TLWTVYLWLSFLKTIFQSENGHDVSTDVQQRARRSNRRRQEGNKIGLKDVITLRRHVETK
GRAKIRKMKVTTKINHHDKINGKRKTAKKQ

>gi568815582f:11865325_12067844|GENSCAN_predicted_CDS_3|453_bp
atgcgggtgctgtggatgctcttttggctcctcttttggctcctgctggaatttatcagc
catcagtccacctgtgttatcaatactctggctgaccatcatcatcgtgggactgacttt
ggtggaagtccttggttacgtatcattattgcatttccgagaagttataaagttgtcctt
accctctggacagtttacctttggttgtctttcctgaagactatcttccagtctgaaaat
ggacatgatgtatccacagatgtacagcagagagccaggaggtccaaccgccgtagacag
gaaggaaataaaattggcctgaaagacgtcattactctacggagacatgtggaaacaaaa
ggtagagctaaaatccgtaagatgaaggtgacaacgaaaatcaaccatcatgacaaaatc
aatggaaagaggaagaccgccaaaaaacagtaa

>gi568815582f:11865325_12067844|GENSCAN_predicted_peptide_4|681_aa
MANIDLEKSRTGDEIILPRGLEYTVEECTCEDCIKSKPKVDSDHCFPLPAMEEGATILVT
TKTNDYCKSLPAALSATEIEKSISASTALHTGSGDLDLRRGLRSGSAGGASSAARLYFRG
GAAGAGLLSPGLSGARQPQKRQRRRRGAGTGPGRGTMSAHLGTVTSSFFFPVQTSSSHHR
GGGVDGDAGSEREGKICEMDSPNNEGAGSRSSMERAGHVVILQPITVILVGQKMEIKARR
PAPTFQVDVRVKRMSQYGGLVAGLAPGSQNNDKRQFLLERLLDAVKQCQIRFGGRKEIAS
DSDSRVTCLCAQFEAVLQHGLKRSRGLALTAAAIKQAAGFASKTETEPVFWYYVKEVLNK
HELQRFYSLRHIASDVGRGRAWLRCALNEHSLERYLHMLLADRCRLSTFYEDWSFVMDEE
RSSMLPTMAAGLNSILFAINIDNKDLNGQSKFAPTVSDLLKESTQNVTSLLKESTQGVSS
LFREITASSAVSILIKPEQETDPLPVVSRNVSADAKCKKERKKKKKVTNIISFDDEEDEQ
NSGDVFKKTPGAGESSEDNSDRSSVNIMSAFESPFGPNSNGSQSSNSWKIDSLSLNGEFG
YQKLDVKSIDDEDVDENEDDVYGNSSGRKHRGHSESPEKPLEGNTCLSQMHSWAPLKVLH
NDSDILFPVSGVGSYSPAVAR

>gi568815582f:11865325_12067844|GENSCAN_predicted_CDS_4|2046_bp
atggctaacattgacctggaaaagagcaggactggtgatgaaattattcttccgagaggc
ctcgagtacacggtggaagaatgcacctgtgaagactgcatcaagagcaaaccgaaggtc
gactctgaccattgctttccactcccagctatggaggaaggcgcaaccattcttgtcacc
acgaaaacgaatgactattgcaagagcctgccagctgctttgagtgctacggagatagag
aaatcaatttctgctagcaccgctctccacaccgggtccggcgacttggatctgcgccgc
ggtttacgttccgggtcggcgggcggggcctcgtcggcggccaggctctacttccggggc
ggggcggccggggcggggctcctgtctcccggcctgtctggagctcggcagccgcagaag
cggcagcggcggcggcgcggcgcaggcaccggcccggggagaggcaccatgagcgcccat
ctggggaccgtcacttcgtccttcttcttcccagtccaaacttcttcctctcaccatcga
gggggtggtgttgatggggatgctggaagtgagagggagggcaagatttgtgaaatggac
agtcctaataatgagggggctggcagccgctcctccatggagcgggctggccatgtggtc
atcctgcaacccatcactgtgattttggttggccagaaaatggaaattaaagcaaggcgg
ccagcccccaccttccaggtagatgtgagggttaaacgtatgtctcagtatggcggattg
gtggcgggcctggccccaggatcacagaacaatgacaaaagacaatttctgctggagcga
ctgctggatgcagtgaaacagtgccagatccgctttggagggagaaaggagattgcctcg
gattccgacagcagggtcacctgtctgtgtgcccagtttgaagccgtcctgcagcatggc
ttgaagaggagtcgaggattggcactcacagcggcagcgatcaagcaggcagcgggcttt
gccagcaaaaccgaaacagagcccgtgttctggtactacgtgaaggaggtcctcaacaag
cacgagctgcagcgcttctactccctgcgccacatcgcctcagacgtgggccggggtcgc
gcctggctgcgctgtgccctcaacgaacactccctggagcgctacctgcacatgctcctg
gccgaccgctgcaggctgagcactttttatgaagactggtcttttgtgatggatgaagaa
aggtccagtatgcttcctaccatggcagcaggtctgaactccatactctttgcgattaac
atcgacaacaaggatttgaacgggcagagtaagtttgctcccaccgtttcagacctctta
aaggagtcaacgcagaacgtgacctccttgctgaaggagtccacgcaaggagtgagcagc
ctgttcagggagatcacagcctcctctgccgtctccatcctcatcaaacctgaacaggag
accgaccccttgcctgtcgtgtccaggaatgtcagtgctgatgccaaatgcaaaaaggag
cggaagaagaaaaagaaagtgaccaacataatctcatttgatgatgaggaagatgagcag
aactctggggacgtgtttaaaaagacacctggggcaggggagagctcagaggacaactcc
gaccgctcctctgtcaatatcatgtccgcctttgaaagccccttcgggcctaactccaat
ggaagtcagagcagcaactcatggaaaattgattccctgtctttgaacggggagtttggg
taccagaagcttgatgtgaaaagcatcgatgatgaagatgtggatgaaaacgaagatgac
gtgtatggaaactcatcaggaaggaagcacaggggccactcggagtcgcccgagaagcca
ctggaagggaacacctgcctctcccagatgcacagctgggctccgctgaaggtgctgcac
aatgactccgacatcctcttccctgtcagtggcgtgggctcctacagcccagcagtggcc
cgttga

>gi568815582f:11865325_12067844|GENSCAN_predicted_peptide_5|64_aa
XSAFDISWSSGPISSEKMELTLRADSRVWDHRKSARTLEADGELRSLDTLATESPEEQEE
LWVL

>gi568815582f:11865325_12067844|GENSCAN_predicted_CDS_5|195_bp
nagagtgcattcgacatcagctggagctcgggtcccatcagcagtgagaagatggagctg
actctgcgagctgacagccgggtgtgggaccacaggaaatctgcaaggactctagaggct
gatggggagctacgttccctggacacacttgctacagaaagcccagaagagcaggaagag
ctctgggttctctaa