Result of FASTA (omim) for
pF1KB6591
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB6591, 380 aa
1>>>pF1KB6591 380 - 380 aa - 380 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9535+/-0.000442; mu= 14.6603+/- 0.028
mean_var=120.0899+/-25.944, 0's: 0 Z-trim(113.8): 763 B-trim: 2627 in 2/48
Lambda= 0.117036
statistics sampled from 22468 (23350) to 22468 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.632), E-opt: 0.2 (0.274), width: 16
Scan time: 8.160
The best scores are: opt bits E(85289)
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380) 2539 440.1 4e-123
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409) 2539 440.1 4.3e-123
NP_001269833 (OMIM: 165196) kappa-type opioid rece ( 291) 1927 336.6 4.3e-92
NP_001008504 (OMIM: 600018) mu-type opioid recepto ( 392) 1467 259.1 1.3e-68
NP_001138758 (OMIM: 600018) mu-type opioid recepto ( 420) 1467 259.1 1.3e-68
NP_001138757 (OMIM: 600018) mu-type opioid recepto ( 389) 1463 258.4 2e-68
NP_001138755 (OMIM: 600018) mu-type opioid recepto ( 397) 1463 258.4 2.1e-68
NP_000905 (OMIM: 600018) mu-type opioid receptor i ( 400) 1463 258.4 2.1e-68
NP_001138756 (OMIM: 600018) mu-type opioid recepto ( 403) 1463 258.4 2.1e-68
NP_001138754 (OMIM: 600018) mu-type opioid recepto ( 406) 1463 258.4 2.1e-68
NP_001272452 (OMIM: 600018) mu-type opioid recepto ( 414) 1463 258.5 2.1e-68
NP_001008503 (OMIM: 600018) mu-type opioid recepto ( 418) 1463 258.5 2.1e-68
NP_001008505 (OMIM: 600018) mu-type opioid recepto ( 446) 1463 258.5 2.2e-68
NP_001138751 (OMIM: 600018) mu-type opioid recepto ( 493) 1463 258.5 2.4e-68
NP_001272453 (OMIM: 600018) mu-type opioid recepto ( 493) 1463 258.5 2.4e-68
NP_000902 (OMIM: 165195) delta-type opioid recepto ( 372) 1395 246.9 5.6e-65
NP_001138753 (OMIM: 600018) mu-type opioid recepto ( 319) 1348 238.9 1.2e-62
NP_001272456 (OMIM: 600018) mu-type opioid recepto ( 292) 1326 235.2 1.5e-61
NP_001138759 (OMIM: 600018) mu-type opioid recepto ( 300) 1322 234.5 2.5e-61
XP_016866395 (OMIM: 600018) PREDICTED: mu-type opi ( 300) 1322 234.5 2.5e-61
NP_001138752 (OMIM: 600018) mu-type opioid recepto ( 300) 1322 234.5 2.5e-61
NP_001272455 (OMIM: 600018) mu-type opioid recepto ( 300) 1322 234.5 2.5e-61
NP_001272457 (OMIM: 600018) mu-type opioid recepto ( 314) 1322 234.5 2.6e-61
XP_016866392 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 1322 234.6 2.7e-61
XP_016866393 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 1322 234.6 2.7e-61
XP_011534164 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 1322 234.6 2.7e-61
XP_011534158 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 1322 234.6 2.7e-61
XP_011534153 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 1322 234.6 2.7e-61
XP_016866394 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 1322 234.6 2.7e-61
XP_011534155 (OMIM: 600018) PREDICTED: mu-type opi ( 346) 1322 234.6 2.7e-61
XP_016883343 (OMIM: 602548) PREDICTED: nociceptin ( 370) 1259 224.0 4.6e-58
NP_872588 (OMIM: 602548) nociceptin receptor isofo ( 370) 1259 224.0 4.6e-58
NP_000904 (OMIM: 602548) nociceptin receptor isofo ( 370) 1259 224.0 4.6e-58
NP_001186948 (OMIM: 602548) nociceptin receptor is ( 370) 1259 224.0 4.6e-58
XP_016883342 (OMIM: 602548) PREDICTED: nociceptin ( 388) 1259 224.0 4.7e-58
XP_016883341 (OMIM: 602548) PREDICTED: nociceptin ( 388) 1259 224.0 4.7e-58
XP_011527130 (OMIM: 602548) PREDICTED: nociceptin ( 388) 1259 224.0 4.7e-58
NP_001305782 (OMIM: 602548) nociceptin receptor is ( 399) 1259 224.0 4.8e-58
NP_001305783 (OMIM: 602548) nociceptin receptor is ( 365) 1216 216.7 6.9e-56
XP_016883344 (OMIM: 602548) PREDICTED: nociceptin ( 365) 1216 216.7 6.9e-56
NP_001305784 (OMIM: 602548) nociceptin receptor is ( 341) 1173 209.4 1e-53
XP_011527132 (OMIM: 602548) PREDICTED: nociceptin ( 289) 1157 206.6 5.9e-53
NP_001040 (OMIM: 182451) somatostatin receptor typ ( 391) 878 159.7 1.1e-38
NP_001043 (OMIM: 182454) somatostatin receptor typ ( 388) 870 158.3 2.8e-38
NP_001041 (OMIM: 182452) somatostatin receptor typ ( 369) 829 151.4 3.3e-36
NP_005277 (OMIM: 600731) neuropeptides B/W recepto ( 333) 769 141.2 3.4e-33
XP_016884412 (OMIM: 182453) PREDICTED: somatostati ( 418) 769 141.3 4e-33
NP_001265616 (OMIM: 182453) somatostatin receptor ( 418) 769 141.3 4e-33
XP_005261778 (OMIM: 182453) PREDICTED: somatostati ( 418) 769 141.3 4e-33
XP_006724374 (OMIM: 182453) PREDICTED: somatostati ( 418) 769 141.3 4e-33
>>NP_000903 (OMIM: 165196) kappa-type opioid receptor is (380 aa)
initn: 2539 init1: 2539 opt: 2539 Z-score: 2331.4 bits: 440.1 E(85289): 4e-123
Smith-Waterman score: 2539; 100.0% identity (100.0% similar) in 380 aa overlap (1-380:1-380)
10 20 30 40 50 60
pF1KB6 MDSPIQIFRGEPGPTCAPSACLPPNSSAWFPGWAEPDSNGSAGSEDAQLEPAHISPAIPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MDSPIQIFRGEPGPTCAPSACLPPNSSAWFPGWAEPDSNGSAGSEDAQLEPAHISPAIPV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 MNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 CIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 IIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 IIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 STSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPLKMRMERQSTSRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_000 STSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPLKMRMERQSTSRV
310 320 330 340 350 360
370 380
pF1KB6 RNTVQDPAYLRDIDGMNKPV
::::::::::::::::::::
NP_000 RNTVQDPAYLRDIDGMNKPV
370 380
>>NP_001305426 (OMIM: 165196) kappa-type opioid receptor (409 aa)
initn: 2539 init1: 2539 opt: 2539 Z-score: 2331.0 bits: 440.1 E(85289): 4.3e-123
Smith-Waterman score: 2539; 100.0% identity (100.0% similar) in 380 aa overlap (1-380:1-380)
10 20 30 40 50 60
pF1KB6 MDSPIQIFRGEPGPTCAPSACLPPNSSAWFPGWAEPDSNGSAGSEDAQLEPAHISPAIPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MDSPIQIFRGEPGPTCAPSACLPPNSSAWFPGWAEPDSNGSAGSEDAQLEPAHISPAIPV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB6 IITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB6 MNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIINI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB6 CIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB6 IIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEALG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB6 STSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPLKMRMERQSTSRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPLKMRMERQSTSRV
310 320 330 340 350 360
370 380
pF1KB6 RNTVQDPAYLRDIDGMNKPV
::::::::::::::::::::
NP_001 RNTVQDPAYLRDIDGMNKPVXLVVEMSSYSSSGREEFNDLGLTQITTAV
370 380 390 400
>>NP_001269833 (OMIM: 165196) kappa-type opioid receptor (291 aa)
initn: 1927 init1: 1927 opt: 1927 Z-score: 1774.3 bits: 336.6 E(85289): 4.3e-92
Smith-Waterman score: 1927; 100.0% identity (100.0% similar) in 291 aa overlap (90-380:1-291)
60 70 80 90 100 110
pF1KB6 VIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVY
::::::::::::::::::::::::::::::
NP_001 MKTATNIYIFNLALADALVTTTMPFQSTVY
10 20 30
120 130 140 150 160 170
pF1KB6 LMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPLKAKIIN
40 50 60 70 80 90
180 190 200 210 220 230
pF1KB6 ICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPV
100 110 120 130 140 150
240 250 260 270 280 290
pF1KB6 LIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEAL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVEAL
160 170 180 190 200 210
300 310 320 330 340 350
pF1KB6 GSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPLKMRMERQSTSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPLKMRMERQSTSR
220 230 240 250 260 270
360 370 380
pF1KB6 VRNTVQDPAYLRDIDGMNKPV
:::::::::::::::::::::
NP_001 VRNTVQDPAYLRDIDGMNKPV
280 290
>>NP_001008504 (OMIM: 600018) mu-type opioid receptor is (392 aa)
initn: 1392 init1: 708 opt: 1467 Z-score: 1353.0 bits: 259.1 E(85289): 1.3e-68
Smith-Waterman score: 1477; 60.7% identity (80.4% similar) in 377 aa overlap (17-380:18-389)
10 20 30 40
pF1KB6 MDSPIQIFRGEPGPTCAPSACLP-PNSSAWFPGWAEPDSNGSA---------GSEDAQL
: :.: : :. ..: . .. :.: : :..:. :
NP_001 MDSSAAPTNASNCTDALAYSSCSPAPSPGSWV-NLSHLDGNLSDPCGPNRTDLGGRDS-L
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 EPAHISPAIPVIIT--AVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADAL
: ::.. . :: :.::.: :::: :: :::.::.::::::::::::::::::::::
NP_001 CPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADAL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 VTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAL
.:.:.::::. :::..:::: .:::::::::::::::::::: ::::::::::::::::
NP_001 ATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKAL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMK
::::: .:::::.: :.:::..:. .. .. :: :. :.:.: : . : .: .:
NP_001 DFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQG--SIDCTLTFSHPTWYWENL-LK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 ICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCW
::::::::..::::: ::: ::::::::::.::::.:::::::::::.::::::::.:::
NP_001 ICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 TPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP
:::::.....:: . ..: :..:::::::::: :::.::::::::::::::.::.:
NP_001 TPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP
300 310 320 330 340 350
350 360 370 380
pF1KB6 LKMRMERQSTSRVRNTVQD-PAYLRDIDGMNKPV
. .:.:...:.:....: :. .: :. :
NP_001 TSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQVRSL
360 370 380 390
>>NP_001138758 (OMIM: 600018) mu-type opioid receptor is (420 aa)
initn: 1392 init1: 708 opt: 1467 Z-score: 1352.6 bits: 259.1 E(85289): 1.3e-68
Smith-Waterman score: 1477; 60.7% identity (80.4% similar) in 377 aa overlap (17-380:18-389)
10 20 30 40
pF1KB6 MDSPIQIFRGEPGPTCAPSACLP-PNSSAWFPGWAEPDSNGSA---------GSEDAQL
: :.: : :. ..: . .. :.: : :..:. :
NP_001 MDSSAAPTNASNCTDALAYSSCSPAPSPGSWV-NLSHLDGNLSDPCGPNRTDLGGRDS-L
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 EPAHISPAIPVIIT--AVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADAL
: ::.. . :: :.::.: :::: :: :::.::.::::::::::::::::::::::
NP_001 CPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADAL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 VTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAL
.:.:.::::. :::..:::: .:::::::::::::::::::: ::::::::::::::::
NP_001 ATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKAL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMK
::::: .:::::.: :.:::..:. .. .. :: :. :.:.: : . : .: .:
NP_001 DFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQG--SIDCTLTFSHPTWYWENL-LK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 ICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCW
::::::::..::::: ::: ::::::::::.::::.:::::::::::.::::::::.:::
NP_001 ICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 TPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP
:::::.....:: . ..: :..:::::::::: :::.::::::::::::::.::.:
NP_001 TPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP
300 310 320 330 340 350
350 360 370 380
pF1KB6 LKMRMERQSTSRVRNTVQD-PAYLRDIDGMNKPV
. .:.:...:.:....: :. .: :. :
NP_001 TSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQVELNLDCHCENAKPWPLSYNAGQSPFP
360 370 380 390 400 410
NP_001 FPGRV
420
>>NP_001138757 (OMIM: 600018) mu-type opioid receptor is (389 aa)
initn: 1392 init1: 708 opt: 1463 Z-score: 1349.4 bits: 258.4 E(85289): 2e-68
Smith-Waterman score: 1473; 61.0% identity (80.5% similar) in 374 aa overlap (17-377:18-386)
10 20 30 40
pF1KB6 MDSPIQIFRGEPGPTCAPSACLP-PNSSAWFPGWAEPDSNGSA---------GSEDAQL
: :.: : :. ..: . .. :.: : :..:. :
NP_001 MDSSAAPTNASNCTDALAYSSCSPAPSPGSWV-NLSHLDGNLSDPCGPNRTDLGGRDS-L
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 EPAHISPAIPVIIT--AVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADAL
: ::.. . :: :.::.: :::: :: :::.::.::::::::::::::::::::::
NP_001 CPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADAL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 VTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAL
.:.:.::::. :::..:::: .:::::::::::::::::::: ::::::::::::::::
NP_001 ATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKAL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMK
::::: .:::::.: :.:::..:. .. .. :: :. :.:.: : . : .: .:
NP_001 DFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQGS--IDCTLTFSHPTWYWENL-LK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 ICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCW
::::::::..::::: ::: ::::::::::.::::.:::::::::::.::::::::.:::
NP_001 ICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 TPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP
:::::.....:: . ..: :..:::::::::: :::.::::::::::::::.::.:
NP_001 TPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP
300 310 320 330 340 350
350 360 370 380
pF1KB6 LKMRMERQSTSRVRNTVQD-PAYLRDIDGMNKPV
. .:.:...:.:....: :. .: :
NP_001 TSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQS
360 370 380
>>NP_001138755 (OMIM: 600018) mu-type opioid receptor is (397 aa)
initn: 1392 init1: 708 opt: 1463 Z-score: 1349.2 bits: 258.4 E(85289): 2.1e-68
Smith-Waterman score: 1473; 61.0% identity (80.5% similar) in 374 aa overlap (17-377:18-386)
10 20 30 40
pF1KB6 MDSPIQIFRGEPGPTCAPSACLP-PNSSAWFPGWAEPDSNGSA---------GSEDAQL
: :.: : :. ..: . .. :.: : :..:. :
NP_001 MDSSAAPTNASNCTDALAYSSCSPAPSPGSWV-NLSHLDGNLSDPCGPNRTDLGGRDS-L
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 EPAHISPAIPVIIT--AVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADAL
: ::.. . :: :.::.: :::: :: :::.::.::::::::::::::::::::::
NP_001 CPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADAL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 VTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAL
.:.:.::::. :::..:::: .:::::::::::::::::::: ::::::::::::::::
NP_001 ATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKAL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMK
::::: .:::::.: :.:::..:. .. .. :: :. :.:.: : . : .: .:
NP_001 DFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQGS--IDCTLTFSHPTWYWENL-LK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 ICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCW
::::::::..::::: ::: ::::::::::.::::.:::::::::::.::::::::.:::
NP_001 ICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 TPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP
:::::.....:: . ..: :..:::::::::: :::.::::::::::::::.::.:
NP_001 TPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP
300 310 320 330 340 350
350 360 370 380
pF1KB6 LKMRMERQSTSRVRNTVQD-PAYLRDIDGMNKPV
. .:.:...:.:....: :. .: :
NP_001 TSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQRERRQKSDW
360 370 380 390
>>NP_000905 (OMIM: 600018) mu-type opioid receptor isofo (400 aa)
initn: 1392 init1: 708 opt: 1463 Z-score: 1349.2 bits: 258.4 E(85289): 2.1e-68
Smith-Waterman score: 1473; 61.0% identity (80.5% similar) in 374 aa overlap (17-377:18-386)
10 20 30 40
pF1KB6 MDSPIQIFRGEPGPTCAPSACLP-PNSSAWFPGWAEPDSNGSA---------GSEDAQL
: :.: : :. ..: . .. :.: : :..:. :
NP_000 MDSSAAPTNASNCTDALAYSSCSPAPSPGSWV-NLSHLDGNLSDPCGPNRTDLGGRDS-L
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 EPAHISPAIPVIIT--AVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADAL
: ::.. . :: :.::.: :::: :: :::.::.::::::::::::::::::::::
NP_000 CPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADAL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 VTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAL
.:.:.::::. :::..:::: .:::::::::::::::::::: ::::::::::::::::
NP_000 ATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKAL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMK
::::: .:::::.: :.:::..:. .. .. :: :. :.:.: : . : .: .:
NP_000 DFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQGS--IDCTLTFSHPTWYWENL-LK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 ICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCW
::::::::..::::: ::: ::::::::::.::::.:::::::::::.::::::::.:::
NP_000 ICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 TPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP
:::::.....:: . ..: :..:::::::::: :::.::::::::::::::.::.:
NP_000 TPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP
300 310 320 330 340 350
350 360 370 380
pF1KB6 LKMRMERQSTSRVRNTVQD-PAYLRDIDGMNKPV
. .:.:...:.:....: :. .: :
NP_000 TSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQLENLEAETAPLP
360 370 380 390 400
>>NP_001138756 (OMIM: 600018) mu-type opioid receptor is (403 aa)
initn: 1392 init1: 708 opt: 1463 Z-score: 1349.2 bits: 258.4 E(85289): 2.1e-68
Smith-Waterman score: 1473; 61.0% identity (80.5% similar) in 374 aa overlap (17-377:18-386)
10 20 30 40
pF1KB6 MDSPIQIFRGEPGPTCAPSACLP-PNSSAWFPGWAEPDSNGSA---------GSEDAQL
: :.: : :. ..: . .. :.: : :..:. :
NP_001 MDSSAAPTNASNCTDALAYSSCSPAPSPGSWV-NLSHLDGNLSDPCGPNRTDLGGRDS-L
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 EPAHISPAIPVIIT--AVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADAL
: ::.. . :: :.::.: :::: :: :::.::.::::::::::::::::::::::
NP_001 CPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADAL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 VTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAL
.:.:.::::. :::..:::: .:::::::::::::::::::: ::::::::::::::::
NP_001 ATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKAL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMK
::::: .:::::.: :.:::..:. .. .. :: :. :.:.: : . : .: .:
NP_001 DFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQGS--IDCTLTFSHPTWYWENL-LK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 ICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCW
::::::::..::::: ::: ::::::::::.::::.:::::::::::.::::::::.:::
NP_001 ICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 TPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP
:::::.....:: . ..: :..:::::::::: :::.::::::::::::::.::.:
NP_001 TPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP
300 310 320 330 340 350
350 360 370 380
pF1KB6 LKMRMERQSTSRVRNTVQD-PAYLRDIDGMNKPV
. .:.:...:.:....: :. .: :
NP_001 TSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQGPPAKFVADQLAGSS
360 370 380 390 400
>>NP_001138754 (OMIM: 600018) mu-type opioid receptor is (406 aa)
initn: 1392 init1: 708 opt: 1463 Z-score: 1349.1 bits: 258.4 E(85289): 2.1e-68
Smith-Waterman score: 1473; 61.0% identity (80.5% similar) in 374 aa overlap (17-377:18-386)
10 20 30 40
pF1KB6 MDSPIQIFRGEPGPTCAPSACLP-PNSSAWFPGWAEPDSNGSA---------GSEDAQL
: :.: : :. ..: . .. :.: : :..:. :
NP_001 MDSSAAPTNASNCTDALAYSSCSPAPSPGSWV-NLSHLDGNLSDPCGPNRTDLGGRDS-L
10 20 30 40 50
50 60 70 80 90 100
pF1KB6 EPAHISPAIPVIIT--AVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADAL
: ::.. . :: :.::.: :::: :: :::.::.::::::::::::::::::::::
NP_001 CPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADAL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KB6 VTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKAL
.:.:.::::. :::..:::: .:::::::::::::::::::: ::::::::::::::::
NP_001 ATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKAL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KB6 DFRTPLKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMK
::::: .:::::.: :.:::..:. .. .. :: :. :.:.: : . : .: .:
NP_001 DFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQGS--IDCTLTFSHPTWYWENL-LK
180 190 200 210 220 230
230 240 250 260 270 280
pF1KB6 ICVFIFAFVIPVLIIIVCYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCW
::::::::..::::: ::: ::::::::::.::::.:::::::::::.::::::::.:::
NP_001 ICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCW
240 250 260 270 280 290
290 300 310 320 330 340
pF1KB6 TPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFP
:::::.....:: . ..: :..:::::::::: :::.::::::::::::::.::.:
NP_001 TPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP
300 310 320 330 340 350
350 360 370 380
pF1KB6 LKMRMERQSTSRVRNTVQD-PAYLRDIDGMNKPV
. .:.:...:.:....: :. .: :
NP_001 TSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQKIDLFQKSSLLNCEHTKG
360 370 380 390 400
380 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 04:06:15 2016 done: Sat Nov 5 04:06:16 2016
Total Scan time: 8.160 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]