GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:06:02

Sequence gi568815586r:113363193_113571498 : 208306 bp : 49.34% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5924   6017   94  2  1  167   94   135 0.826  21.97
 1.02 Intr +   9457   9615  159  0  0   88  109   240 0.999  26.28
 1.03 Intr +  11282  11382  101  1  2  131   95   129 0.998  16.81
 1.04 Intr +  11601  11815  215  0  2   93   61   357 0.858  31.86
 1.05 Intr +  17553  17650   98  1  2   70  105   188 0.824  18.43
 1.06 Intr +  20913  21073  161  2  2   81   94   217 0.989  20.39
 1.07 Intr +  21659  21754   96  2  0  116   48   144 0.956  12.32
 1.08 Intr +  22020  22091   72  0  0   95   46   118 0.943   6.82
 1.09 Intr +  23745  23897  153  0  0   95   92   216 0.999  21.89
 1.10 Intr +  24552  24714  163  0  1  134   48   192 0.999  19.78
 1.11 Term +  25267  25434  168  0  0  114   45   191 0.944  15.28
 1.12 PlyA +  28355  28360    6                               1.05

 2.10 PlyA -  28468  28463    6                               1.05
 2.09 Term -  29957  29749  209  0  2   98   55   343 0.945  29.50
 2.08 Intr -  30824  30700  125  1  2   76   71   171 0.999  14.43
 2.07 Intr -  34200  33973  228  2  0  113   99   321 0.999  32.68
 2.06 Intr -  35414  35323   92  2  2   97   84   170 0.785  16.29
 2.05 Intr -  35696  35515  182  0  2   23  105   228 0.530  17.59
 2.04 Intr -  35959  35920   40  1  1  100  114   -14 0.956   0.20
 2.03 Intr -  36518  36352  167  0  2  117   48   317 0.652  30.28
 2.02 Intr -  42253  42141  113  0  2   72   81    36 0.174   1.32
 2.01 Init -  55730  55645   86  2  2   69  106    91 0.746   9.29
 2.00 Prom -  57079  57040   40                              -8.76

 3.00 Prom +  60222  60261   40                              -4.06
 3.01 Init +  60872  60925   54  1  0   73   26    51 0.121  -3.32
 3.02 Intr +  64770  64964  195  2  0  106   78   210 0.669  21.41
 3.03 Intr +  65228  65267   40  1  1  112   60    17 0.935  -0.90
 3.04 Intr +  65968  66107  140  2  2  106  116   185 0.999  23.28
 3.05 Intr +  70942  71030   89  0  2   89   91    50 0.998   4.17
 3.06 Intr +  72137  72364  228  2  0  122   94   287 0.999  29.68
 3.07 Intr +  73559  73683  125  2  2  107   92   171 0.999  19.63
 3.08 Intr +  74694  74881  188  1  2   76   41   164 0.419   9.91
 3.09 Intr +  85382  85522  141  1  0    2    9   207 0.336   4.75
 3.10 Term +  89109  89216  108  2  0  101   42    12 0.173  -3.59
 3.11 PlyA +  89224  89229    6                               1.05

 4.10 PlyA -  90431  90426    6                               1.05
 4.09 Term - 100365  99998  368  1  2  106   48   548 0.571  47.37
 4.08 Intr - 104229 104064  166  0  1  108   94   215 0.989  23.63
 4.07 Intr - 105212 104935  278  0  2   84   80   644 0.996  60.44
 4.06 Intr - 106153 105930  224  0  2   70   91   470 0.997  43.27
 4.05 Intr - 108421 108134  288  0  0   31  110   266 0.775  19.46
 4.04 Intr - 109249 109126  124  2  1   35   23    64 0.171  -5.76
 4.03 Intr - 110706 110578  129  1  0   87  121    92 0.726  13.07
 4.02 Intr - 120502 120464   39  2  0  114   98    14 0.484   3.20
 4.01 Init - 135844 135769   76  1  1   55   65   112 0.170   4.85
 4.00 Prom - 153965 153926   40                              -2.16

 5.08 PlyA - 154585 154580    6                               1.05
 5.07 Term - 177079 176894  186  1  0   63   54   129 0.738   4.49
 5.06 Intr - 188012 187779  234  2  0   73    5   133 0.000   1.39
 5.05 Intr - 190083 189925  159  0  0   95   35    74 0.010   2.98
 5.04 Intr - 194698 194580  119  2  2   91   34    54 0.035   0.48
 5.03 Intr - 197050 197015   36  2  0   72  111    34 0.151   2.33
 5.02 Intr - 198785 198726   60  0  0   85   78    41 0.142   1.51
 5.01 Init - 207184 207067  118  1  1   61   99    87 0.843   7.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 187935 187773  163  2  1  103   55   128 0.911   8.41
S.002 Init - 189986 189925   62  2  2  102   35   102 0.930   5.17


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:113363193_113571498|GENSCAN_predicted_peptide_1|493_aa
XWAFLELGTSGQYNDSLQAYAAGVVEAAVSEELIYMHWMNTVVNYCGPFEYEVGYCERLK
SFLEANLEWMQEEMESNPDSPYWHQVRLTLLQLKGLEDSYEGRVSFPAGKFTIKPLGFLL
LQLSGDLEDLELALNKTKIKPSLGSGSCSALIKLLPGQSDLLVAHNTWNNYQHMLRVIKK
YWLQFREGPWGDYPLVPGNKLVFSSYPGTIFSCDDFYILGSGLVTLETTIGNKNPALWKY
VRPRGCVLEWVRNIVANRLASDGATWADIFKRFNSGTYNNQWMIVDYKAFIPGGPSPGSR
VLTILEQIPGMVVVADKTSELYQKTYWASYNIPSFETVFNASGLQALVAQYGDWFSYDGS
PRAQIFRRNQSLVQDMDSMVRLMRYNDFLHDPLSLCKACNPQPNGENAISARSDLNPANG
SYPFQALRQRSHGGIDVKVTSMSLARILSLLAASGPTWDQVPPFQWSTSPFSGLLHMGQP
DLWKFAPVKVSWD

>gi568815586r:113363193_113571498|GENSCAN_predicted_CDS_1|1482_bp
nngtgggccttcctggagctgggcacaagtggccaatacaatgacagcttgcaggcctat
gcagccggtgtggtggaggctgctgtgtcggaggagctcatctacatgcactggatgaac
acggtggtgaattactgcggccccttcgagtatgaagtcggctactgcgagaggctgaag
agcttcctggaggccaacctagagtggatgcaggaagagatggagtcaaacccagactca
ccttactggcaccaggtgcggctgaccctcctgcagctgaaaggcctggaggacagctac
gaaggccgtgtgagcttcccagctgggaagttcaccatcaaacccttggggttcctcctg
ctgcagctctctggggacctggaagacctggagctggccctgaacaagaccaagatcaaa
ccttctctgggctctggctcctgttctgccctcatcaagctgctccctggccagagtgac
ctcctggttgcccacaacacctggaacaactaccagcacatgctgcgtgtcatcaagaag
tactggctccagttccgggaaggcccctggggggactacccgctggttcccggcaacaag
ctggtcttctcctcctaccccggcaccatcttctcctgcgacgacttctacatcctgggc
agtgggctggtgacactggagaccaccattggcaacaagaacccagccctgtggaagtat
gtgcggcccaggggctgtgtgctggagtgggtacgcaacatcgtggccaaccgcctggcc
tcggatggggccacctgggcagacatcttcaagaggttcaacagcggcacgtataacaac
cagtggatgatcgtggactacaaggcgttcatcccgggtgggcccagccccgggagccgg
gtgcttaccatcctggagcagatccccggcatggtggtggtggctgacaagacctcggag
ctctaccagaagacctactgggccagctacaacataccgtccttcgagactgtgttcaat
gccagtgggctgcaggccctagtggcccagtatggggactggttttcttatgacgggagc
ccccgggcccagatcttccggcggaaccagtcactggtacaagacatggactccatggtc
aggctgatgaggtacaatgacttcctccatgaccctctgtcactgtgcaaagcctgcaac
ccccagcccaatggggagaatgctatctccgcccgctccgacctcaacccggccaatggc
tcctaccccttccaggccctgcgtcagcgctcccatgggggtatcgatgtgaaggtgacc
agcatgtcactggccaggatcctgagcctgctggcggccagcggtcccacgtgggaccag
gtgcccccgttccagtggagcacctcgcccttcagcggcctgctgcacatgggccagcca
gacctctggaagttcgcgcctgtcaaggtttcatgggactga

>gi568815586r:113363193_113571498|GENSCAN_predicted_peptide_2|413_aa
MAKVAKVARKRSKYHDVIILQNANNYLEKSGEISNLPSLPDTSETPERSCLLAIIMEARK
LTFLVGRMMSGEPLHVKTPIRDSMALSKMAGTSVYLKMDSAQPSGSFKIRGIGHFCKRVR
DRWAKQGCAHFVCSSDAPALTRSPPPTLAAGNAGMAAAYAARQLGVPATIVVPSTTPALT
IERLKNEGATVKVVGELLDEAFELAKALAKNNPGWVYIPPFDDPLIWEGHASIVKELKET
LWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFGAHSFHAATTAGKLVSLPK
ITSVAKALGVKTVGAQALKLFQEHPIFSEVISDQEAVAAIEKFVDDEKILVEPACGAALA
AVYSHVIQKLQLEGNLRTPLPSLVVIVCGGSNISLAQLRALKEQLGMTNRLPK

>gi568815586r:113363193_113571498|GENSCAN_predicted_CDS_2|1242_bp
atggcaaaagttgcaaaggtggcacgtaagcgttcaaagtaccatgatgtcattatatta
cagaatgctaacaactacctggaaaaaagcggggaaatctcaaacttgccttccctgccg
gacacaagcgaaactccagaaaggagctgcctgcttgccatcatcatggaagccagaaaa
ctcaccttccttgttggaagaatgatgtctggagaacccctgcacgtgaagacccccatc
cgtgacagcatggccctgtccaaaatggccggcaccagcgtctacctcaagatggacagt
gcccagccctccggctccttcaagatccggggcattgggcacttctgcaagagggtacgg
gaccggtgggccaagcaaggctgtgcacattttgtctgctcctcggatgctcccgcactg
acacgctctccacccccgaccctggcagcgggcaacgcaggcatggcggctgcatatgcg
gccaggcaactcggcgtccccgccaccatcgtggtgcccagcaccacacctgctctcacc
attgagcgcctcaagaatgaaggtgccacagtcaaggtggtgggtgagttattggatgaa
gccttcgagctggccaaggccctagcgaagaacaacccgggttgggtctacattcccccc
tttgatgaccccctcatctgggaaggccacgcttccatcgtgaaagagctgaaggagaca
ctgtgggaaaagccgggggccatcgcgctgtcagtgggcggcgggggcctgctgtgtgga
gtggtccaggggctgcaggaggtgggctggggggacgtgcctgtcatcgccatggagact
tttggtgcccacagcttccacgctgccaccaccgcaggcaaacttgtctccctgcccaag
atcaccagtgttgccaaggccctgggcgtgaagactgtgggggctcaggccctgaagctg
tttcaggaacaccccattttctctgaagttatctcggaccaggaggctgtggccgccatt
gagaagttcgtggatgatgagaagatcctggtggagcccgcctgcggggcagccctggcc
gctgtctatagccacgtgatccagaagctccaactggaggggaatctccgaaccccgctg
ccatccctcgtggtcatcgtctgcgggggcagcaacatcagcctggcccagctgcgggcg
ctcaaggaacagctgggcatgacaaataggttgcccaagtga

>gi568815586r:113363193_113571498|GENSCAN_predicted_peptide_3|435_aa
MARSRLTATSPHRNLASQAVYLVSRMDGPVAEHAKQEPFHVVTPLLESWALSQVAGMPVF
LKCENVQPSGSFKIRGIGHFCQEMAKKGCRHLVCSSGGNAGIAAAYAARKLGIPATIVLP
ESTSLQVVQRLQGEGAEVQLTGKVWDEANLRAQELAKRDGWENVPPFDHPLIWKGHASLV
QELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHGAHCFNAAITAGK
LVTLPDITSVAKSLGAKTVAARALECMQVCKIHSEVVEDTEAVSAVQQLLDDERMLVEPA
CGAALAAIYSGLLRRLQAEGCLPPSLTSVVVIVCGGNNINSRELQALKTHLGQRKTRRRR
KEEKKKKKKKKKKKKKKKRKRKRKRKKKKEKKKNRSPHFKNISSVRTGTKIYSTYTEPRE
SRECLVYTKPLQNVC

>gi568815586r:113363193_113571498|GENSCAN_predicted_CDS_3|1308_bp
atggcgcgatctcggctcactgcaacctcgcctcaccgcaacctcgcctctcaggctgtc
tacctggtctccagaatggacggccctgtggcagagcatgccaagcaggagccctttcac
gtggtcacacctctgttggagagctgggcgctgtcccaggtggcgggcatgcctgtcttc
ctcaagtgtgagaatgtgcagcccagcggctccttcaagattcggggcattgggcatttc
tgccaggagatggccaagaagggatgcagacacctggtgtgctcctcagggggtaatgcg
ggcatcgctgctgcctatgctgctaggaagctgggcattcctgccaccatcgtgctcccc
gagagcacctccctgcaggtggtgcagaggctgcagggggagggggccgaggttcagctg
actggaaaggtctgggacgaggccaatctgagggcgcaagagttggccaagagggacggc
tgggagaatgtccccccgtttgaccaccccctaatatggaaaggccacgccagcctggtg
caggagctgaaagcagtgctgaggaccccaccaggtgccctggtgctggcagttgggggt
gggggtctcctggccggggtggtggctggcctgctggaggtgggctggcagcatgtaccc
atcattgccatggagacccatggggcacactgcttcaatgcggccatcacagccggcaag
ctggtcacacttccagacatcaccagtgtggccaagagcctgggtgccaagacggtggcc
gctcgggccctggagtgcatgcaggtgtgcaagattcactctgaagtggtggaggacacc
gaggctgtgagcgctgtgcagcagctcctggatgatgagcgtatgctggtggagcctgcc
tgtggggcagccttagcagccatctactcaggcctcctgcggaggctccaggccgagggc
tgcctgcccccttccctgacttcagttgtggtaatcgtgtgtggaggcaacaacatcaac
agccgagagctgcaggctttgaaaacccacctgggccagaggaagactagaagaagaaga
aaagaagaaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaggaag
aggaagaggaagaggaagaagaagaaggagaagaaaaaaaacagatcccctcatttcaaa
aatattagctctgtgaggactgggaccaaaatctattctacttacacggaacccagggag
tccagggagtgcctagtgtacactaagccgttacaaaacgtttgctga

>gi568815586r:113363193_113571498|GENSCAN_predicted_peptide_4|563_aa
MLPGQWYGGALPLASLALWSLIPPVCNRRALEGDELLNTRSPPLDTVGDSARPERKGDKW
ASLSPNTGIHKSCSLNLRIHKALSMRKARLGPSPVYDKKKPGPAPGAGRTALTQLQGAEG
ARGLALQLLRQEAKGSGGPGRPEGQGPKGRARRPKPPGRGAMMVHCAGCERPILDRFLLN
VLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRFGTKCAGCAQGISPSDLVRK
ARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYLSSSSLKEGSLNSVSSCTDR
SLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKRRGPRTTIKAKQLETLKAAF
AATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMR
PLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGPPSQAQSPADSSFLAASGPG
STPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGTLHPMPGEVFSGGPSPPFPM
SGTSGYSGPLSHPNPELNEAAVW

>gi568815586r:113363193_113571498|GENSCAN_predicted_CDS_4|1692_bp
atgctgcctggccagtggtatggcggggcccttcccctggcctccctagccctctggtct
ctcatccctcctgtctgtaatagaagagctcttgaaggagatgagctcttaaacacaaga
tcacctcccctagatactgtgggggacagtgctaggcctgagaggaagggggacaagtgg
gcatccctgagccccaacacaggcatccacaaatcctgctccctcaacctccgaatccac
aaagctctctccatgagaaaggcccggctgggccccagccccgtgtatgacaaaaagaag
ccggggccggctccaggagccgggagaaccgcgctgacgcagcttcagggcgcagagggg
gcgcggggactcgccctgcagctgctgagacaagaggcgaagggcagcggagggcccggc
aggcccgagggccaggggcccaaagggagggcaaggcggccgaagccgccggggcgcggg
gctatgatggtgcactgcgccggttgcgagcggcccatcctcgaccgctttctgctgaac
gtgctggaccgcgcgtggcacatcaaatgtgttcagtgctgcgagtgcaaaaccaacctc
tcggagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgactttttcaggcgc
tttggcacgaaatgcgccggctgcgcgcaaggcatctcgcccagcgacctggtgcgcaag
gcccggagcaaagtctttcacctcaactgtttcacctgcatggtgtgtaacaagcagctg
tccaccggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaagacgactac
ctgagctcatccagcctcaaggagggcagcctcaactcagtgtcatcctgtacggaccgc
agtttgtccccggacctccaggacgcactgcaggacgaccccaaagagacggacaactcg
acctcgtcggacaaggagacggccaacaacgagaacgaggagcagaactcgggcaccaag
cggcgcggcccccgcaccaccatcaaggccaagcagctggagacgctcaaggctgccttc
gccgccacgcccaagcccacgcgccacatccgcgagcagctggcgcaggagaccggcctc
aacatgcgcgtcatccaggtgtggtttcagaaccgacggtccaaagaacgccggatgaaa
cagctgagcgccctaggcgcccggaggcacgccttcttccggagtccgcggcgcatgcgt
ccgctgggcggccgcttggacgagtctgagatgttggggtccaccccgtacacctactac
ggagactaccaaggcgactactacgcgccgggaagcaactacgacttcttcgcgcacggc
ccgccttcgcaggcgcagtccccggccgactccagcttcctggcggcctctggccccggc
tcgacgccgctgggagcgctggaaccgccgctcgccggcccgcacgccgcggacaacccc
aggttcaccgacatgatctcgcacccggacacaccgagccccgagccaggcctgccgggc
acgctgcaccccatgcccggcgaggtattcagcggcgggcccagcccgcccttcccaatg
agcggcaccagcggctacagcggacccctgtcgcatcccaaccccgagctcaacgaagcc
gccgtgtggtaa

>gi568815586r:113363193_113571498|GENSCAN_predicted_peptide_5|303_aa
MLVLMIISNFEELNIFETWKCSQLSEPELMEAIGLIHQPVHPYAKTGFQDNLRNSPGMRA
SAPLTYESSDPGHCNEYAKAARTFKQLLTITEGSCGVSGVEYSGCGKQPHKDIIEQRQHR
RIAQVALRSAPNALTSGCRRPGRNGEGACLPPPSDAASPGCKTRNVEGVKFNQIQAEASR
RLIASSLPLRVLPSAYEETQTSLLEDERQNRPTIDQSHGPSKVPDVKEQSHVSKAGPQLS
RDSNGSLGTLVLGFPVSSFDILDGILTGPGHRKSRQPSPAARALYSFLIPFLIPGLSEEE
REK

>gi568815586r:113363193_113571498|GENSCAN_predicted_CDS_5|912_bp
atgttggtgcttatgattatcagcaattttgaagagctgaatatttttgaaacctggaaa
tgcagtcagttgtctgagcctgagctcatggaagccattgggctgattcaccagccagtg
cacccatatgccaagactggcttccaggacaatctcagaaacagccctgggatgagagca
tctgcaccactcacctatgagagcagtgacccaggacactgtaatgaatatgctaaagca
gccagaacatttaagcaattgctgactattactgagggcagctgtggtgtttcaggagtt
gagtacagtggttgtggcaagcagcctcataaggacatcattgagcagagacaacacaga
agaattgctcaagttgctcttcgcagtgccccaaatgccttaacttcaggatgcagacgc
ccaggccgcaatggggaaggtgcttgtcttcctcctccttcggatgctgcatctcctggc
tgcaaaaccaggaatgtggagggagtgaagttcaaccagatccaagctgaggcctcaaga
cgcctcatagcttcttctctccctctcagagtcctgccatcagcatatgaagaaacccag
accagcctactggaggatgagagacaaaatagaccaaccatagaccagtcccatggcccc
agcaaggtcccagatgtgaaagaacaaagccacgtcagcaaagctggaccacagctgtcc
agagattctaatgggagccttggaaccctggttctgggattccctgtgtcttcctttgac
atcctggatggtatcctcacaggacctggacacagaaagtcccgtcaacccagcccagct
gccagagctctctactccttcctcatccctttcctgatcccagggttatcagaagaagaa
agagagaaatga