GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:02:37

Sequence gi568815586f:80617064_80819048 : 201985 bp : 35.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2321   2479  159  0  0   94   54    97 0.940   5.94
 1.02 Intr +   3091   3313  223  2  1   47   89   117 0.466   3.96
 1.03 Intr +   4998   5071   74  0  2   85   82    16 0.410  -1.17
 1.04 Term +   5944   6080  137  2  2   49   38   103 0.245  -1.40
 1.05 PlyA +   6456   6461    6                               1.05

 2.00 Prom +   6773   6812   40                              -1.15
 2.01 Init +   7919   8048  130  1  1   74   49    77 0.715   2.76
 2.02 Intr +  15129  15228  100  1  1  123  116   -24 0.909   2.15
 2.03 Intr +  17882  18010  129  2  0   64   89   189 0.922  15.49
 2.04 Intr +  32525  32606   82  2  1   25   88    43 0.197  -3.28
 2.05 Intr +  35681  35771   91  1  1   94   50    49 0.495   0.35
 2.06 Intr +  40922  40998   77  0  2   96   84   115 0.966  10.22
 2.07 Intr +  51944  52078  135  1  0   84  114    13 0.758   3.34
 2.08 Intr +  52276  52401  126  0  0   74   60    97 0.952   5.46
 2.09 Intr +  53281  53429  149  0  2   65   94    27 0.716  -0.89
 2.10 Intr +  56106  56241  136  0  1   79   99    28 0.723   2.65
 2.11 Intr +  61539  61711  173  2  2   87  107    11 0.094   0.72
 2.12 Intr +  85918  86026  109  1  1  104   61    27 0.055   0.97
 2.13 Intr +  90630  91175  546  2  0   18   75   620 0.005  45.85
 2.14 Intr +  91461  91893  433  2  1  105   17   202 0.080   7.09
 2.15 Intr +  99855 100501  647  1  2   47  103   727 0.300  60.87
 2.16 Term + 129214 129375  162  0  0   51   47   129 0.095   2.05
 2.17 PlyA + 130795 130800    6                               1.05

 3.03 PlyA - 131457 131452    6                               1.05
 3.02 Term - 150632 150447  186  2  0   47   45   132 0.751   1.31
 3.01 Init - 159088 159035   54  1  0   83   64    74 0.406   5.84
 3.00 Prom - 162980 162941   40                              -6.75

 4.05 PlyA - 165087 165082    6                               1.05
 4.04 Term - 169484 169289  196  1  1   60   44   172 0.612   5.90
 4.03 Intr - 171157 170961  197  1  2   72   37   137 0.620   4.29
 4.02 Intr - 171491 171277  215  0  2   66  107    70 0.659   4.21
 4.01 Init - 173157 173010  148  0  1   75   89   129 0.991  12.00
 4.00 Prom - 178779 178740   40                              -6.55

 5.03 PlyA - 179061 179056    6                               1.05
 5.02 Term - 188287 188117  171  1  0  105   41   168 0.990  10.64
 5.01 Init - 188830 188783   48  1  0   68   43    44 0.839  -1.10
 5.00 Prom - 190405 190366   40                              -6.15

 6.02 PlyA - 191279 191274    6                               1.05
 6.01 Term - 194620 194402  219  1  0   73   43   415 0.920  31.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 101295 101370   76  2  1   69   95    47 0.856   1.67
S.002 Term - 180663 180586   78  0  0  140   39    72 0.883   4.28
S.003 Init - 181209 181162   48  0  0   69   76    20 0.842  -0.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:80617064_80819048|GENSCAN_predicted_peptide_1|197_aa
XPARPKTKPTPIYDATGKLLVTSTTITIRMPICYYSDDHGPIKNVQVLVTETGAQHDGNV
TKWYDAYFNKARPYFTNEGFPNPPCTEGKTKFSGNEEIYIIGADNACMIPGNEDKICNGP
LKPKKQYLFKFRATNIMGQFTDSDYSDPVKTLGPQKPQFIRLKELHEQGISGAPLENVRL
HVLPRSWRAVAQCILNC

>gi568815586f:80617064_80819048|GENSCAN_predicted_CDS_1|594_bp
nctccagcacgaccaaaaaccaaaccaacccctatttatgatgccacaggaaaactgctt
gtgacttcaacaacaattacaatcagaatgccaatatgttactacagtgatgatcatgga
ccaataaaaaatgtacaagtgcttgtgacagaaacaggagctcagcatgatggaaatgta
acaaagtggtatgatgcatattttaataaagcaaggccatattttacaaatgaaggcttt
cctaaccctccatgtacagaaggaaagacaaagtttagtggcaatgaagaaatctacatc
ataggtgctgataatgcatgcatgattcctggcaatgaagacaaaatttgcaatggacca
ctgaaaccaaaaaagcaatacttatttaaatttagagctacaaatattatgggacaattt
actgactctgattattctgaccctgttaagactttaggccctcaaaagccccagtttatt
cgtcttaaagaattgcatgaacagggtatttctggggcaccacttgaaaatgtaagactt
catgtgttgcccagatcctggcgagctgttgctcagtgtatcttgaactgctaa

>gi568815586f:80617064_80819048|GENSCAN_predicted_peptide_2|1074_aa
MQPMSCELDKLATDSKEFLVKEHCQGRNSRRTQKENKVDQFSNGEGLSERTVEIILSVTL
CILSIILLGTAIFAFARIRQKQKEGGTYSPQDAEIIDTKLKLDQLITVADLELKDERLTR
PISKKSFLQHVEELCTNNNLKFQEEFSELPKFLQDLSSTDADLPWNRAKNRFPNIKPYNN
NRVKLIADASVPGSDYINASYISGYLCPNEFIATQGPLPGTVGDFWRMVWETRAKTLVML
TQCFEKGRIRCHQYWPEDNKPVTVFGDIVITKLMEDVQIDWTIRDLKIERHGDCMTVRQC
NFTAWPEHGVPENSAPLIHFVKLVRASRAHDTTPMIVHCSAGVGRTGVFIALDHLTQHIN
DHDFVDIYGLVAELRSERMCMVQNLAQYIFLHQCILDLLSNKGSNQPICFVNYSALQKMD
SLDAMEGKQKQQYMPSLLVYHLRFSEVTQMFCRSKCKTIFTTAFGNLWAQTVCRLGKLQI
ESEAKEENMMMDLFETGSYFFYLDGENVTLQPLEVAEGSPLYPGSDGTLSPCQDQMPPEA
GSDSSGEEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEA
FEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQELGVDPFSYRPKQE
NLEGADFLRTCSSQWPSVSDHSRGLVITAKEGKVKGLWAAPEKIREVDRMLGPRGLEARA
GTRPAKRALFARRDQAFPRCQSGLARGAELLRVPSLGAMFVCCFFAQEEQVLIRQPRVAF
DAFLPSWTVFPRRNANSPAWRKWWRSQQASALVNYRSDRLGSSARDLPIGGGARLPFLPI
PLAAVQVHRLPLSRMDVMDGCQFSPSEYFYDGSCIPSPEGEFGDEFVPRVAAFGAHKAEL
QGSDEDEHVRAPTGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQAFETL
KRCTTTNPNQRLPKVEILRNAIRYIESLQELLREQVENYYSLPGQSCSEPTSPTSNCSDG
MKERINFSVSLAMPRQNAADSQATAACIAEPKQPTSAKAIMALWAIFAEIESIA

>gi568815586f:80617064_80819048|GENSCAN_predicted_CDS_2|3225_bp
atgcagcccatgagctgcgagttggacaagctcgccacagattcaaaagagttcttagta
aaagaacattgccagggaagaaactctagaagaactcaaaaagaaaacaaagttgatcaa
ttctccaatggggaaggactttcagaaagaaccgtagagatcattctttccgtcactttg
tgtatcctttcaataattctccttggaacagctatttttgcatttgcaagaattcgacag
aagcagaaagaaggtggcacatactctcctcaggatgcagaaattattgacactaaattg
aagctggatcagctcatcacagtggcagacctggaactgaaggacgagagattaacgcgg
ccaataagcaagaaatccttcctgcaacatgttgaagagctttgcacaaacaacaaccta
aagtttcaagaagaattttcggaattaccaaaatttcttcaggatctttcttcaactgat
gctgatctgccttggaatagagcaaaaaaccgcttcccaaacataaaaccatataataat
aacagagtaaagctgatagctgacgctagtgttccaggttcggattatattaatgccagc
tatatttctggttatttatgtccaaatgaatttattgctactcaaggtccactaccagga
acagttggagatttttggagaatggtgtgggaaaccagagcaaaaacattagtaatgcta
acacagtgttttgaaaaaggacggatcagatgccatcagtattggccagaggacaacaag
ccagttactgtctttggagatatagtgattacaaagctaatggaggatgttcaaatagat
tggactatcagggatctgaaaattgaaaggcatggggattgcatgactgttcgacagtgt
aactttactgcctggccagagcatggggttcctgagaacagcgcccctctaattcacttt
gtgaagttggttcgagcaagcagggcacatgacaccacacctatgattgttcactgcagt
gctggagttggaagaactggagtttttattgctctggaccatttaacacaacatataaat
gaccatgattttgtggatatatatggactagtagctgaactgagaagtgaaagaatgtgc
atggtgcagaatctggcacagtatatctttttacaccagtgcattctggatctcttatca
aataagggaagtaatcagcccatctgttttgttaactattcagcacttcagaagatggac
tctttggacgccatggaaggtaaacagaaacaacagtatatgcccagcttactagtttac
cacctacggttctctgaagtgactcagatgttctgtaggtctaagtgcaaaactattttt
accacagcgtttgggaatctctgggcacaaactgtctgccgattaggtaaattacagatc
gagtcagaggccaaggaggagaacatgatgatggacctttttgaaactggctcctatttc
ttctacttggatggggaaaatgttactctgcagccattagaagtggcagaaggctctcct
ttgtatccagggagtgatggtaccttgtccccctgccaggaccaaatgcccccggaagcg
gggagcgacagcagcggagaggaacatgtcctggcgcccccgggcctgcagcctccacac
tgccccggccagtgtctgatctgggcttgcaagacctgcaagagaaaatctgcccccact
gaccggcgaaaagccgccaccctgcgcgaaaggaggaggctaaagaaaatcaacgaggcc
ttcgaggcactgaagcggcgaactgtggccaaccccaaccagaggctgcccaaggtggag
attctgcggagcgccatcagctatattgagcggctgcaggacctgctgcaccggctggat
cagcaggagaagatgcaggagctgggggtggaccccttcagctacagacccaaacaagaa
aatcttgagggtgcggatttcctgcgcacctgcagctcccagtggccaagtgtttccgat
cattccagggggctcgtgataacggctaaggaaggtaaagtaaaagggctctgggccgca
ccagagaaaatccgggaggtggataggatgcttgggccgagagggctcgaagcgagagca
gggacgcgccctgcgaaaagggcgctctttgcgcgccgggaccaggcctttcctcgctgc
caaagcggcctcgcgcggggcgcggagctgcttcgtgttccttctttgggtgctatgttt
gtgtgttgttttttcgctcaggaggagcaagtattgattcgtcagcctcgagtagccttc
gatgcctttcttccatcgtggacagtatttcctcggaggaacgcaaactcccctgcgtgg
aggaagtggtggagaagccaacaggcgtctgcccttgttaattaccggagcgacagacta
gggagctccgcccgggatttgcccatcggcggaggcgccaggctcccgtttctccccatc
cctctcgctgccgtccaggtgcaccgcctgcctctcagcaggatggacgtgatggatggc
tgccagttctcaccttctgagtacttctacgacggctcctgcataccgtcccccgagggt
gaatttggggacgagtttgtgccgcgagtggctgccttcggagcgcacaaagcagagctg
cagggctcagatgaggacgagcacgtgcgagcgcctaccggccaccaccaggctggtcac
tgcctcatgtgggcctgcaaagcctgcaagaggaagtccaccaccatggatcggcggaag
gcagccactatgcgcgagcggaggcgcctgaagaaggtcaaccaggctttcgaaaccctc
aagaggtgtaccacgaccaaccccaaccagaggctgcccaaggtggagatcctcaggaat
gccatccgctacatcgagagcctgcaggagttgctgagagagcaggtggagaactactat
agcctgccgggacagagctgctcggagcccaccagccccacctccaactgctctgatggc
atgaaagaacgaatcaatttttctgtctcacttgcaatgccaaggcagaatgcagctgac
agtcaagctacagcagcttgcattgcagaacccaagcagccgacatctgccaaggccatt
atggcattatgggccatttttgctgagatagaatcaattgcctga

>gi568815586f:80617064_80819048|GENSCAN_predicted_peptide_3|79_aa
MAEGKREAVTFFTWQQGGTTVAVIGLLPDAYSKSIHQDAELAQRKRFNCRVTEQGDGKKP
QIHLPEEFEDKIFKGFGVN

>gi568815586f:80617064_80819048|GENSCAN_predicted_CDS_3|240_bp
atggcagaaggcaaacgagaagcagtcaccttctttacatggcagcaaggcggaactacc
gtagctgtaataggcttattgcctgatgcatacagcaagtcaatacaccaagatgctgag
ctggcgcagagaaagagattcaattgtagggtcactgaacaaggagatgggaagaagcct
caaatccatctccctgaagaatttgaggataaaatttttaagggttttggagtgaactga

>gi568815586f:80617064_80819048|GENSCAN_predicted_peptide_4|251_aa
MQEQWQAFNPIGSGNGHLAGSGAQRAPCWIQRDGSQWRVCDSGKTAVVDGEINSHVAHTK
PVWWSLHTDAHEIWCRDSDWGTFLGRSIPCPPALCFMRKIHLRPQVLRPTSPRNISPISN
LRQRRYVLSVDPKLWCRSRTSEGSLPLVFNHWRDASLIIHPGFGGVRPLRDACLGPSPLA
ASPAFLGSLLQVPEIWPPGQGMPAAQIPPKPRPICVGPHWKSDCPTHLAATPRAPGTLAQ
GSLTPSQIFLV

>gi568815586f:80617064_80819048|GENSCAN_predicted_CDS_4|756_bp
atgcaggaacaatggcaagcctttaacccaatcgggagtggcaatgggcaccttgctgga
tcaggagcacagcgggcaccctgctggatccagagggatggaagtcagtggcgggtctgt
gacagcggcaaaacagcagtggtggatggtgaaataaacagccatgttgctcatacaaag
cctgtttggtggtctcttcacacggacgcgcatgaaatttggtgccgtgactcggattgg
gggaccttccttgggagatcaatcccctgtcctcctgctctttgcttcatgagaaagatc
cacctacgacctcaggtcctcagaccaaccagcccaagaaacatctcaccaatttcaaat
ctgagacaaaggagatacgttttatccgtggacccaaaactctggtgccggtcacggact
agtgaaggcagccttcccttggtgtttaatcattggagggacgcttctctgattattcac
ccaggtttcggaggtgtcagaccactcagggatgcctgccttggtccttcacccttagca
gcaagtcctgcttttctggggagcttgctacaagtgccagaaatctggccaccaggccaa
ggaatgcctgcagcccagattcctcctaagccgcgtcccatctgtgtgggaccccactgg
aaatcggactgtccaactcacctggcagccactcccagagcccctggaactctggcccaa
ggctctctgactccttcccagatcttcttggtttag

>gi568815586f:80617064_80819048|GENSCAN_predicted_peptide_5|72_aa
MRNKHKQKPLINPSDLHYHMHDPDDLIQGIITKTIRLVTKKTKFQGMTPIKSNARNPEFP
SRTPDRNNHKAD

>gi568815586f:80617064_80819048|GENSCAN_predicted_CDS_5|219_bp
atgaggaataaacacaagcagaaacccctgataaacccatcagatctccattaccacatg
catgatcctgatgatctaatccagggaattattacgaaaactatccgcctagtcactaag
aaaaccaagttccaggggatgactccaataaaatcgaatgcaaggaacccagagtttcca
agcagaacaccggacagaaataatcataaagctgactaa

>gi568815586f:80617064_80819048|GENSCAN_predicted_peptide_6|72_aa
SVEGEHHEKAVELLKAAKDSVKLVVRYTPKVLEEMEARFEKLRTARRRQQQQLLIQQQQQ
QQQQQTQQNHMS

>gi568815586f:80617064_80819048|GENSCAN_predicted_CDS_6|219_bp
agtgtggaaggagaacaccatgagaaagctgtggaactactcaaggctgctaaagacagc
gtcaagctggtggtgcgatacaccccaaaagttctggaagaaatggaggctcgctttgaa
aagctacgaacagccaggcgtcggcagcagcagcaattgctaattcagcagcagcaacag
cagcagcagcaacaaacacaacaaaaccacatgtcatag