GENSCAN 1.0	Date run:  5-Nov-116	Time: 03:50:15

Sequence gi568815589f:104404263_104605219 : 200957 bp : 36.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6004   6096   93  0  0   67   93    37 0.686   2.53
 1.02 Intr +  11115  11203   89  2  2  131  110    30 0.933   7.35
 1.03 Intr +  40574  40775  202  2  1   70   56   104 0.223   3.77
 1.04 Term +  49822  49881   60  0  0  105   51    87 0.523   3.53
 1.05 PlyA +  50024  50029    6                               1.05

 2.06 PlyA -  50135  50130    6                               1.05
 2.05 Term -  55824  55671  154  2  1   89   48   137 0.662   6.21
 2.04 Intr -  66726  66629   98  0  2   87   84    30 0.286   0.39
 2.03 Intr -  69391  69287  105  1  0   73   75    90 0.560   5.69
 2.02 Intr -  74239  74107  133  0  1   46  119    14 0.409   0.03
 2.01 Init -  91688  91495  194  2  2   67   60   168 0.361  10.39
 2.00 Prom -  97265  97226   40                              -3.75

 3.00 Prom +  98214  98253   40                              -8.95
 3.01 Init + 100319 100888  570  1  0   73   52   333 0.010  23.33
 3.02 Intr + 116745 116913  169  2  1   29   71   147 0.031   5.70
 3.03 Term + 118592 118758  167  0  2   21   38   125 0.082  -2.10
 3.04 PlyA + 119460 119465    6                               1.05

 4.02 PlyA - 119615 119610    6                               1.05
 4.01 Sngl - 122596 121991  606  1  0   87   44   205 0.427  11.94
 4.00 Prom - 123472 123433   40                              -4.95

 5.02 PlyA - 125413 125408    6                               1.05
 5.01 Sngl - 132110 131508  603  2  0   87   39   314 0.384  22.34
 5.00 Prom - 137352 137313   40                              -3.45

 6.00 Prom + 151435 151474   40                              -3.75
 6.01 Sngl + 165257 165868  612  1  0   99   42   420 0.802  34.44
 6.02 PlyA + 166340 166345    6                               1.05

 7.00 Prom + 181088 181127   40                              -3.75
 7.01 Init + 186485 186637  153  1  0   72   42    95 0.619   3.33
 7.02 Term + 188107 188268  162  0  0   14   48   214 0.941   6.95
 7.03 PlyA + 190342 190347    6                               1.05

 8.03 PlyA - 190458 190453    6                               1.05
 8.02 Term - 195005 194195  811  1  1   17   36   355 0.004  14.86
 8.01 Init - 200936 200413  524  2  2   67   89   321 0.048  24.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  12962  13151  190  2  1   75   47    95 0.813   0.04
S.002 Sngl - 200936 200409  528  2  0   67   48   332 0.929  22.91


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:104404263_104605219|GENSCAN_predicted_peptide_1|147_aa
MGRFFLGLKLCFPVLHDLTSSALAYQRLPCTDVRLHNLLKMNFPNNSGPTHLGINHPIHD
RCFLPSNNRLQVLQIWILGLTSAICQGLQPQTEGCTVSFPTFEVLGLGLASLLLSLQTAY
HGTSPCDCSLRVTTIEKKNKELGKVQR

>gi568815589f:104404263_104605219|GENSCAN_predicted_CDS_1|444_bp
atgggacgattcttcttaggtctaaagctctgttttccagtattgcatgacctgacctct
tcggctttggcgtaccagagattaccttgtacggatgtgagacttcacaacctgctaaaa
atgaactttcctaataactcgggacctacccatctaggaataaaccatcctattcatgac
agatgctttctgccctcgaacaacagactccaagttcttcaaatttggattcttggactt
acatcagcgatttgccagggccttcagccacagactgaaggctgcactgtcagcttccct
acttttgaggttttgggacttggactggcttccttgctcctcagcttgcagacggcctat
catgggacttcaccttgtgattgtagtttaagagtgaccacaattgagaaaaagaacaag
gaactgggcaaagttcagagatga

>gi568815589f:104404263_104605219|GENSCAN_predicted_peptide_2|227_aa
MSKKNVQGTKSKRWGHKLHQKAVCSVKQEHGAKPRRLEVMGHKIQPTKDSNRQTKAYIGE
KSNHWIWRENKSGLDSFGTQKLFPVPWGMEVARTVGWGSLDFDRHQNDLAALNVAKGYRY
ELVFAKILDFEIHRVPFEDLWTVEDGGSPFAFYHDWKLPEASPEAEATILPVQPEEPCYF
TDLVHSLSQVSIRHPPYGDVINKRPSTVNSPDFPPGTRFISMNDFYE

>gi568815589f:104404263_104605219|GENSCAN_predicted_CDS_2|684_bp
atgtctaagaaaaatgttcaaggaacaaagtcaaagaggtggggccacaaacttcatcaa
aaggcggtttgcagtgtgaagcaggaacacggagcaaagccaaggcgtctggaagtcatg
ggacacaagatccaaccaacaaaagattcaaatcgtcagacgaaggcctatattggtgaa
aaaagtaaccattggatttggagagaaaataaaagtgggctggactcttttggaacccag
aaacttttccctgtcccctggggcatggaggtggcaagaactgtggggtggggttcattg
gattttgataggcatcaaaatgacctggctgcacttaacgttgcaaagggctacaggtat
gagctggtatttgctaagatcttggattttgaaattcatagagttccatttgaggatcta
tggactgtggaggatggcggctccccctttgctttctaccatgattggaagcttcctgag
gcctccccagaagcagaagccactatacttcctgtacagcctgaagaaccgtgttacttc
acagacctggttcattccttgtctcaggtctccatccggcacccaccctatggagacgtc
attaataaacgtccatccacagtaaacagcccagactttccacctggcactaggtttatt
tcaatgaatgacttttatgagtga

>gi568815589f:104404263_104605219|GENSCAN_predicted_peptide_3|301_aa
MGSTECVLLPMMAYDRYVAICNPLRYPVIMNRRTCVQIAAGSWMTGCLTAMVEMMSVLPL
SLCGNSIINHFTCEILAILKLVCVDTSLVQLIMLVISVLLLPMPMLLICISYAFILASIL
RISSVEGRSKAFSTCTAHLMVVVLFYGTALSMHLKPSAVDSQEIDKFMALVYAGQTPMLN
PIIYSLRNKEPPLVIPRQTGSGVDLQQTPADLQQRGLTVGRKTNKQKGIAHPLRDPIRRS
PTSKTKEKGNLHRKLRLKAAVKTTGDVQQGYAVLGHVRRIHRKRNKKDCNRFTEEFKLTG
M

>gi568815589f:104404263_104605219|GENSCAN_predicted_CDS_3|906_bp
atgggctccactgagtgtgtgctcctgcccatgatggcatatgaccggtatgtggccatc
tgcaaccccctgagataccctgtcatcatgaataggagaacctgtgtgcagattgcagct
ggctcctggatgacaggctgtctcactgccatggtggaaatgatgtctgtgctgccactg
tctctctgtggtaatagcatcatcaatcatttcacttgtgaaattctggccatcttgaaa
ttggtttgtgtggacacctccctggtgcagttaatcatgctggtgatcagtgtacttctt
ctccccatgccaatgctactcatttgtatctcttatgcatttatcctcgccagtatcctg
agaatcagctcagtggaaggtcgaagtaaagccttttcaacgtgcacagcccacctgatg
gtggtagttttgttctatgggacggctctctccatgcacctgaagccctccgctgtagat
tcacaggaaatagacaaatttatggctttggtgtatgccggacaaacccccatgttgaat
cctatcatctatagtctacggaacaaagagcctccgctggtgatacccaggcaaacaggg
tctggggtggaccttcagcaaactccagcagacctgcagcagaggggcttgactgttgga
aggaaaactaacaaacagaaaggaatagcacatccactcagagaccccatccgaaggtca
ccaacatcaaagaccaaagaaaaaggaaatttacataggaaattaaggctaaaagcagct
gtaaaaacgactggtgatgtgcagcaaggatatgctgtgcttggccatgtcagaagaatc
cacagaaaaagaaacaaaaaggattgtaataggtttactgaagagtttaaactcactgga
atgtaa

>gi568815589f:104404263_104605219|GENSCAN_predicted_peptide_4|201_aa
MAFDRYVAICNPLRYPIIMNKVVYVLLTSVSWLSGGINSTVQTSLAMRWPFCGNNIINHF
LCEILAVLKLACSDISVNIVTLAVSNIAFLVLPLLVIFFSYMFILYTILRTNSATGRHKA
FSTCSAHLTVVIIFYGTIFFMYAKPKSQDLLGKDNLQATEGLVSMFYGVVTPMLNPIIYS
LRNKDVKAAIKYLLSRKAINQ

>gi568815589f:104404263_104605219|GENSCAN_predicted_CDS_4|606_bp
atggcatttgatcgttatgtggccatctgtaaccctctgagataccccatcatcatgaac
aaggtggtgtatgtactgctgacttctgtatcatggctttctggtggaatcaattcaact
gtgcaaacatcacttgccatgcgatggcctttctgtgggaacaatattattaatcatttc
ttatgcgagatcttagctgtcctaaaattagcttgttctgatatatctgtcaatattgtt
accctagcagtgtcaaatattgctttcctagttcttcctctgctcgtgatttttttctcc
tatatgttcatcctctacaccatcttgcgaacgaactcggccacaggaagacacaaggca
ttttctacatgctcagctcacctgactgtggtgatcatattttatggtaccatcttcttt
atgtatgcaaaacctaagtcccaggacctccttgggaaagacaacttgcaagctacagag
gggcttgtttccatgttttatggggttgtgacccccatgttaaaccccataatctatagc
ttgagaaataaagatgtaaaagctgctataaaatatttgctgagcaggaaagctattaac
cagtaa

>gi568815589f:104404263_104605219|GENSCAN_predicted_peptide_5|200_aa
MAFDRYVAICNPLRYPIILSKVAYVLMASVSWLSGGINSAVQTLLAMRLPFCGNNIINHF
ACEILAVLKLACADISLNIITMVISNMAFLVLPLMVIFFSYMFILYTILQMNSATGRRKA
FSTCSAHLTVVIIFYGTIFFMYAKPKSQDLIGEEKLQALDKLISLFYGVVTPMLNPILYS
LRNKDVKAAVKYLLNKKPIH

>gi568815589f:104404263_104605219|GENSCAN_predicted_CDS_5|603_bp
atggcatttgatcgttatgtggccatctgcaacccactgagataccccatcatcctgagc
aaggtggcgtatgtattgatggcttctgtgtcctggctgtccggtggaataaattcagct
gtgcaaacattacttgccatgagactgcctttctgtgggaataatattatcaatcatttc
gcatgtgaaatattagctgtcctcaagctggcctgtgctgatatatccctcaatattatc
accatggtgatatcaaatatggccttcctggttcttccactgatggtcatttttttctcc
tatatgttcatcctctacaccatcttgcaaatgaattcagccacaggaagacgcaaggca
ttttccacgtgctcagctcacctgactgtggtgatcatattttacggtaccatcttcttt
atgtatgcgaaaccgaagtctcaagacctgattggggaagaaaaattgcaagcattagac
aagctcatttctctgttttatggggtagtgacacccatgctgaatcctatactctatagc
ttgagaaataaggatgtaaaagctgctgtaaaatatttgctgaacaaaaaaccaattcac
taa

>gi568815589f:104404263_104605219|GENSCAN_predicted_peptide_6|203_aa
MALDRYVAICYPLRYPVIMSKGAYVAMAAGSWVTGLVDSVVQTAFAMQLPFCANNVIKHF
VCEILAILKLACADISINVISMTGSNLIVLVIPLLVISISYIFIVATILRIPSTEGKHKA
FSTCSAHLTVVIIFYGTIFFMYAKPESKASVDSGNEDIIEALISLFYGVMTPMLNPLIYS
LRNKDVKAAVKNILCRKNFSDGK

>gi568815589f:104404263_104605219|GENSCAN_predicted_CDS_6|612_bp
atggcactggaccgctatgtggccatctgctacccactgagataccctgtcatcatgagc
aagggtgcctatgtggccatggcagctgggtcctgggtcactgggcttgtggactcagta
gtgcagacagcttttgcaatgcagttaccattctgtgctaataatgtcattaaacatttt
gtctgtgaaattctggctatcttgaaactggcctgtgctgatatttcaatcaatgtgatt
agtatgacagggtcgaatctgattgttctggttattccattgttagtaatttccatctct
tacatatttattgttgccactattctgaggattccttccactgaaggaaaacataaggcc
ttctccacctgctcagcccacctgacagtggtgattatattctatggaaccatcttcttc
atgtacgcaaagcctgagtctaaagcctctgttgattcaggtaatgaagacatcattgag
gccctcatctcccttttctatggagtgatgactcccatgcttaatcctctcatctatagt
ctgcgaaacaaggatgtaaaggctgctgtcaaaaacatactgtgtaggaaaaacttttct
gatggaaaatga

>gi568815589f:104404263_104605219|GENSCAN_predicted_peptide_7|104_aa
MTVVIVFYGTILFMYMKAKSKDSAFDKLIALFYGIVTPMLNPIIYSLRNTEYDVLEPVQN
KEDVNVEERLSSGCQSPSSMKGAYTQEEGVDPSTWLRTTHAKKS

>gi568815589f:104404263_104605219|GENSCAN_predicted_CDS_7|315_bp
atgacagtggtgattgtgttttatgggacaatcctcttcatgtacatgaaggcaaagtcc
aaagactctgcttttgacaaactgattgccctgttctatggcatagtcacccccatgctc
aatcctatcatctatagcctgaggaatacagagtatgatgttttggagcctgtccagaat
aaggaagatgtcaacgtggaagagaggctcagttcagggtgtcaaagtccaagcagcatg
aaaggagcatacacacaagaggaaggtgtggatcctagcacctggttgaggaccactcat
gcaaagaaaagctga

>gi568815589f:104404263_104605219|GENSCAN_predicted_peptide_8|444_aa
MAAGSWIIGAVNSAVQSVFVVQLPFCRNNIINHFTCEILAVMKLACADISDNEFIMLVAT
TLFILTPLLLIIVSYTLIIVSIFKISSSEGRSKASSTCSAHLTVVIIFYGTILFMYMKPK
SKETLNSDDLDATDKIISMFYGVMTPMMNPLIYSLRNKDVKEAVKHLLNRRFFSNILDPH
LHTPMYFFLGNLSFLDICYTTTSIPSTLVSFLSERKTISLSGCAVQMFLSLAMGTTECVL
LGVMAFDRYVAICNPLRYPIIMSKDAYVPMAAGSWIIGAVNSAVQTVFVVQLPFCRNNII
NHFTCEILAVMKLACADISGNEFILLVTTTLFLLTPLLLIIVSYTLIILSIFKISSSEGR
SKPSSTCSARLTVVITFCGTIFLMYMKPKSQETLNSDDLDATDKLIFIFYRVMTPMMNPL
IYSLRNKDVKEAVKHLLRRKNFNK

>gi568815589f:104404263_104605219|GENSCAN_predicted_CDS_8|1335_bp
atggcagctgggtcctggatcataggagctgtcaattctgcagtacaatcagtgtttgtg
gtacaattgcctttctgcaggaataacatcatcaatcatttcacctgtgaaattctggct
gtcatgaaactggcctgtgctgacatctcagacaatgagttcatcatgcttgtggccaca
acattgttcatattgacacctttgttattaatcattgtctcttacacgttaatcattgtg
agcatcttcaaaattagctcttccgaggggagaagcaaagcttcctctacctgttcagcc
catctgactgtggtcataatattctatgggaccatcctcttcatgtacatgaagcccaag
tctaaagagacacttaattcggatgacttggatgctaccgacaaaattatatccatgttc
tatggggtgatgactcccatgatgaatcctttaatctacagtcttagaaacaaggatgtg
aaagaggcagtaaaacacctactgaacagaaggttctttagcaacatcttggaccctcac
cttcacacccctatgtacttctttctggggaacctctccttcttggacatctgctacacc
accacctctattccctccacgctagtgagcttcctttcagaaagaaagaccatttccctt
tctggctgtgcagtgcagatgttcctcagcttggccatggggacaacagagtgtgtgctt
ctgggcgtgatggcctttgaccgctatgtggctatctgcaaccctctgagatatcccatc
atcatgagtaaggatgcctatgtacccatggcagctgggtcctggatcataggagctgtc
aattctgcagtacaaacagtgtttgtggtacaattgcctttctgcaggaataacatcatc
aatcatttcacctgtgaaattctagctgtcatgaaactggcctgtgctgacatctcaggc
aatgagttcatcctgcttgtgaccacaacattgttcctattgacacctttgttattaatt
attgtctcttacacgttaatcattttgagcatcttcaaaattagctcttcggaggggaga
agcaaaccttcctctacctgctcagctcgtctgactgtggtgataacattctgtgggacc
atcttcctcatgtacatgaagcccaagtctcaagagacacttaattcagatgacttggat
gccactgacaaacttatattcatattctacagggtgatgactcccatgatgaatccttta
atctacagtcttagaaacaaggatgtgaaggaggcagtaaaacacctactgagaagaaaa
aattttaacaagtaa