Result of FASTA (ccds) for pF1KE0805
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0805, 360 aa
  1>>>pF1KE0805 360 - 360 aa - 360 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4731+/-0.00105; mu= 16.0806+/- 0.063
 mean_var=195.7431+/-83.683, 0's: 0 Z-trim(105.5): 315  B-trim: 913 in 2/49
 Lambda= 0.091671
 statistics sampled from 7947 (8461) to 7947 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.61), E-opt: 0.2 (0.26), width:  16
 Scan time:  2.080

The best scores are:                                      opt bits E(32554)
CCDS13449.2 MC3R gene_id:4159|Hs108|chr20          ( 323) 2166 299.8 2.2e-81
CCDS11868.1 MC5R gene_id:4161|Hs108|chr18          ( 325) 1325 188.5 6.7e-48
CCDS11976.1 MC4R gene_id:4160|Hs108|chr18          ( 332) 1273 181.7   8e-46
CCDS56011.1 MC1R gene_id:4157|Hs108|chr16          ( 317)  958 140.0 2.7e-33
CCDS11869.1 MC2R gene_id:4158|Hs108|chr18          ( 297)  583 90.3 2.2e-18


>>CCDS13449.2 MC3R gene_id:4159|Hs108|chr20               (323 aa)
 initn: 2166 init1: 2166 opt: 2166  Z-score: 1574.6  bits: 299.8 E(32554): 2.2e-81
Smith-Waterman score: 2166; 100.0% identity (100.0% similar) in 323 aa overlap (38-360:1-323)

        10        20        30        40        50        60       
pF1KE0 LEGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASCCLPSVQPTLPNGSEHLQAPFFSNQS
                                     ::::::::::::::::::::::::::::::
CCDS13                               MNASCCLPSVQPTLPNGSEHLQAPFFSNQS
                                             10        20        30

        70        80        90       100       110       120       
pF1KE0 SSAFCEQVFIKPEVFLSLGIVSLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSVS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 SSAFCEQVFIKPEVFLSLGIVSLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSVS
               40        50        60        70        80        90

       130       140       150       160       170       180       
pF1KE0 NALETIMIAIVHSDYLTFEDQFIQHMDNIFDSMICISLVASICNLLAIAVDRYVTIFYAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NALETIMIAIVHSDYLTFEDQFIQHMDNIFDSMICISLVASICNLLAIAVDRYVTIFYAL
              100       110       120       130       140       150

       190       200       210       220       230       240       
pF1KE0 RYHSIMTVRKALTLIVAIWVCCGVCGVVFIVYSESKMVIVCLITMFFAMMLLMGTLYVHM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 RYHSIMTVRKALTLIVAIWVCCGVCGVVFIVYSESKMVIVCLITMFFAMMLLMGTLYVHM
              160       170       180       190       200       210

       250       260       270       280       290       300       
pF1KE0 FLFARLHVKRIAALPPADGVAPQQHSCMKGAVTITILLGVFIFCWAPFFLHLVLIITCPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 FLFARLHVKRIAALPPADGVAPQQHSCMKGAVTITILLGVFIFCWAPFFLHLVLIITCPT
              220       230       240       250       260       270

       310       320       330       340       350       360
pF1KE0 NPYCICYTAHFNTYLVLIMCNSVIDPLIYAFRSLELRNTFREILCGCNGMNLG
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS13 NPYCICYTAHFNTYLVLIMCNSVIDPLIYAFRSLELRNTFREILCGCNGMNLG
              280       290       300       310       320   

>>CCDS11868.1 MC5R gene_id:4161|Hs108|chr18               (325 aa)
 initn: 1280 init1: 891 opt: 1325  Z-score: 973.4  bits: 188.5 E(32554): 6.7e-48
Smith-Waterman score: 1325; 61.6% identity (85.1% similar) in 323 aa overlap (38-359:1-317)

        10        20        30        40        50         60      
pF1KE0 LEGDFVFPVSSSSFLRTLLEPQLGSALLTAMNASCCLPSVQPTLPNGSE-HLQAPFFSNQ
                                     ::.:  :  .. .: :..: .:..:  .:.
CCDS11                               MNSSFHLHFLDLNL-NATEGNLSGPNVKNK
                                             10         20         

         70        80        90       100       110       120      
pF1KE0 SSSAFCEQVFIKPEVFLSLGIVSLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSV
       ::   ::.. :  ::::.::..::::::::: :.:.: :::::::::.:::::::::::.
CCDS11 SSP--CEDMGIAVEVFLTLGVISLLENILVIGAIVKNKNLHSPMYFFVCSLAVADMLVSM
      30          40        50        60        70        80       

        130       140       150       160       170       180      
pF1KE0 SNALETIMIAIVHSDYLTFEDQFIQHMDNIFDSMICISLVASICNLLAIAVDRYVTIFYA
       :.: ::: : .... .:.. : :..:.::.::::::::.:::.:.:::::::::::::::
CCDS11 SSAWETITIYLLNNKHLVIADAFVRHIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYA
        90       100       110       120       130       140       

        190       200       210       220       230       240      
pF1KE0 LRYHSIMTVRKALTLIVAIWVCCGVCGVVFIVYSESKMVIVCLITMFFAMMLLMGTLYVH
       :::: :::.:.. ..:..::. :  ::.:::.:::: .::.:::.:::::..:. .::.:
CCDS11 LRYHHIMTARRSGAIIAGIWAFCTGCGIVFILYSESTYVILCLISMFFAMLFLLVSLYIH
       150       160       170       180       190       200       

        250       260       270       280       290       300      
pF1KE0 MFLFARLHVKRIAALPPADGVAPQQHSCMKGAVTITILLGVFIFCWAPFFLHLVLIITCP
       :::.:: ::::::::: :.  . .:.. :.::::.:.:::::  :::::::::.:...::
CCDS11 MFLLARTHVKRIAALPGAS--SARQRTSMQGAVTVTMLLGVFTVCWAPFFLHLTLMLSCP
       210       220         230       240       250       260     

        310       320       330       340       350       360      
pF1KE0 TNPYCICYTAHFNTYLVLIMCNSVIDPLIYAFRSLELRNTFREILCGCNGMNLG      
        : ::  . .::: ::.:::::::.::::::::: :.:.::.::.: : :. .       
CCDS11 QNLYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTFKEIIC-CRGFRIACSFPRR
         270       280       290       300       310        320    

CCDS11 D
        

>>CCDS11976.1 MC4R gene_id:4160|Hs108|chr18               (332 aa)
 initn: 1267 init1: 514 opt: 1273  Z-score: 936.2  bits: 181.7 E(32554): 8e-46
Smith-Waterman score: 1273; 61.4% identity (85.5% similar) in 303 aa overlap (53-354:26-319)

             30        40        50        60        70         80 
pF1KE0 RTLLEPQLGSALLTAMNASCCLPSVQPTLPNGSEHLQAPFFSNQSSSAFC-EQVFIKPEV
                                     :.:: :   .     :.. : ::.:..:::
CCDS11      MVNSTHRGMHTSLHLWNRSSYRLHSNASESLGKGY-----SDGGCYEQLFVSPEV
                    10        20        30             40        50

              90       100       110       120       130       140 
pF1KE0 FLSLGIVSLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSVSNALETIMIAIVHSD
       :..::..:::::::::.:...: :::::::::.::::::::::::::. :::.:....: 
CCDS11 FVTLGVISLLENILVIVAIAKNKNLHSPMYFFICSLAVADMLVSVSNGSETIVITLLNST
               60        70        80        90       100       110

             150       160       170       180       190       200 
pF1KE0 YLTFEDQFIQHMDNIFDSMICISLVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALTL
         :  ..:  ..::..::.:: ::.::::.::.:::::: ::::::.::.::::...  .
CCDS11 D-TDAQSFTVNIDNVIDSVICSSLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGII
               120       130       140       150       160         

             210       220       230       240       250       260 
pF1KE0 IVAIWVCCGVCGVVFIVYSESKMVIVCLITMFFAMMLLMGTLYVHMFLFARLHVKRIAAL
       :  ::. : : :..::.::.:. ::.:::::::.:. ::..:::::::.::::.::::.:
CCDS11 ISCIWAACTVSGILFIIYSDSSAVIICLITMFFTMLALMASLYVHMFLMARLHIKRIAVL
     170       180       190       200       210       220         

             270       280       290       300       310       320 
pF1KE0 PPADGVAPQQHSCMKGAVTITILLGVFIFCWAPFFLHLVLIITCPTNPYCICYTAHFNTY
       : . ..  .: . ::::.:.:::.:::. :::::::::.. :.:: ::::.:. .::: :
CCDS11 PGTGAI--RQGANMKGAITLTILIGVFVVCWAPFFLHLIFYISCPQNPYCVCFMSHFNLY
     230         240       250       260       270       280       

             330       340       350       360       
pF1KE0 LVLIMCNSVIDPLIYAFRSLELRNTFREILCGCNGMNLG       
       :.::::::.:::::::.:: :::.::.::.: :             
CCDS11 LILIMCNSIIDPLIYALRSQELRKTFKEIIC-CYPLGGLCDLSSRY
       290       300       310        320       330  

>>CCDS56011.1 MC1R gene_id:4157|Hs108|chr16               (317 aa)
 initn: 940 init1: 584 opt: 958  Z-score: 711.2  bits: 140.0 E(32554): 2.7e-33
Smith-Waterman score: 958; 49.5% identity (77.6% similar) in 295 aa overlap (59-352:23-315)

       30        40        50        60        70        80        
pF1KE0 QLGSALLTAMNASCCLPSVQPTLPNGSEHLQAPFFSNQSSSAFCEQVFIKPEVFLSLGIV
                                     :  . .::.. : : .: :.  .:::::.:
CCDS56         MAVQGSQRRLLGSLNSTPTAIPQLGLAANQTG-ARCLEVSISDGLFLSLGLV
                       10        20        30         40        50 

       90       100       110       120       130       140        
pF1KE0 SLLENILVILAVVRNGNLHSPMYFFLCSLAVADMLVSVSNALETIMIAIVHSDYLTFEDQ
       ::.:: ::. ....: ::::::: :.: ::..:.::: ::.::: .: ....  :. .  
CCDS56 SLVENALVVATIAKNRNLHSPMYCFICCLALSDLLVSGSNVLETAVILLLEAGALVARAA
              60        70        80        90       100       110 

      150       160       170       180       190       200        
pF1KE0 FIQHMDNIFDSMICISLVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALTLIVAIWVC
        .:..::..: . : :...:.: : :::::::..::::::::::.:. .:   ..:::: 
CCDS56 VLQQLDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAVAAIWVA
             120       130       140       150       160       170 

      210       220       230       240       250       260        
pF1KE0 CGVCGVVFIVYSESKMVIVCLITMFFAMMLLMGTLYVHMFLFARLHVKRIAALPPADGVA
         : ...::.: .   :..::...:.::..::..:::::.  :  :.. :: :   .  .
CCDS56 SVVFSTLFIAYYDHVAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGIARLHKRQRPV
             180       190       200       210       220       230 

      270       280       290       300       310       320        
pF1KE0 PQQHSCMKGAVTITILLGVFIFCWAPFFLHLVLIITCPTNPYCICYTAHFNTYLVLIMCN
        :  . .:::::.:::::.:..::.::::::.::. :: .: : :   .:: .:.::.::
CCDS56 HQGFG-LKGAVTLTILLGIFFLCWGPFFLHLTLIVLCPEHPTCGCIFKNFNLFLALIICN
              240       250       260       270       280       290

      330       340       350        360
pF1KE0 SVIDPLIYAFRSLELRNTFREIL-CGCNGMNLG
       ..::::::::.: ::: :..:.: :        
CCDS56 AIIDPLIYAFHSQELRRTLKEVLTCSW      
              300       310             

>>CCDS11869.1 MC2R gene_id:4158|Hs108|chr18               (297 aa)
 initn: 951 init1: 583 opt: 583  Z-score: 443.4  bits: 90.3 E(32554): 2.2e-18
Smith-Waterman score: 940; 47.9% identity (79.8% similar) in 282 aa overlap (72-352:21-293)

              50        60        70        80        90       100 
pF1KE0 CCLPSVQPTLPNGSEHLQAPFFSNQSSSAFCEQVFIKPEVFLSLGIVSLLENILVILAVV
                                     : .: .  :.:....::..:::..:.::: 
CCDS11           MKHIINSYENINNTARNNSDCPRVVLPEEIFFTISIVGVLENLIVLLAVF
                         10        20        30        40        50

             110       120       130       140       150       160 
pF1KE0 RNGNLHSPMYFFLCSLAVADMLVSVSNALETIMIAIVHSDYLTFEDQFIQHMDNIFDSMI
       .: ::..:::::.::::..::: :. . ::.:.: . .  ::  . .:    :.:.::..
CCDS11 KNKNLQAPMYFFICSLAISDMLGSLYKILENILIILRNMGYLKPRGSFETTADDIIDSLF
               60        70        80        90       100       110

             170       180       190       200       210       220 
pF1KE0 CISLVASICNLLAIAVDRYVTIFYALRYHSIMTVRKALTLIVAIWVCCGVCGVVFIVYSE
        .::..:: .: .::.:::.:::.:::::::.:.:........::. :   :......:.
CCDS11 VLSLLGSIFSLSVIAADRYITIFHALRYHSIVTMRRTVVVLTVIWTFCTGTGITMVIFSH
              120       130       140       150       160       170

             230       240       250       260       270       280 
pF1KE0 SKMVIVCLITMFFAMMLLMGTLYVHMFLFARLHVKRIAALPPADGVAPQQHSCMKGAVTI
          ... . ..:  :....  :::::::.:: :...:..:: :.         ::::.:.
CCDS11 HVPTVITFTSLFPLMLVFILCLYVHMFLLARSHTRKISTLPRAN---------MKGAITL
              180       190       200       210                220 

             290       300       310       320       330       340 
pF1KE0 TILLGVFIFCWAPFFLHLVLIITCPTNPYCICYTAHFNTYLVLIMCNSVIDPLIYAFRSL
       :::::::::::::: ::..:.  ::.:::: :: . :..  .:::::.::::.:::::: 
CCDS11 TILLGVFIFCWAPFVLHVLLMTFCPSNPYCACYMSLFQVNGMLIMCNAVIDPFIYAFRSP
             230       240       250       260       270       280 

              350       360
pF1KE0 ELRNTFRE-ILCGCNGMNLG
       :::..:.. :.:        
CCDS11 ELRDAFKKMIFCSRYW    
             290           




360 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 03:14:45 2016 done: Sat Nov  5 03:14:45 2016
 Total Scan time:  2.080 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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