GENSCAN 1.0	Date run:  5-Nov-116	Time: 03:07:32

Sequence gi568815588f:68237222_68442051 : 204830 bp : 42.31% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1879   2001  123  1  0   93   61    36 0.332   0.18
 1.02 Intr +   2074   2192  119  1  2   55  110    47 0.627   2.79
 1.03 Intr +   4717   4839  123  2  0   87   92    34 0.296   3.34
 1.04 Intr +   7811   7926  116  0  2   84   36    86 0.260   2.25
 1.05 Intr +  12613  12878  266  0  2   57   80   121 0.146   3.59
 1.06 Intr +  17977  18097  121  1  1   53   86    45 0.551   0.38
 1.07 Intr +  22893  22928   36  2  0   38  109    70 0.416   1.64
 1.08 Intr +  23201  23464  264  1  0    8   41   201 0.482   4.19
 1.09 Term +  24033  24257  225  2  0   57   48   379 0.966  26.60
 1.10 PlyA +  24418  24423    6                               1.05

 2.00 Prom +  30611  30650   40                              -5.65
 2.01 Init +  37394  37556  163  1  1   74   59   106 0.789   6.24
 2.02 Intr +  38696  38807  112  0  1   35   38   102 0.873  -1.58
 2.03 Term +  40574  41102  529  2  1   78   53   350 0.913  23.24
 2.04 PlyA +  42035  42040    6                               1.05

 3.09 PlyA -  43881  43876    6                               1.05
 3.08 Term -  47068  46956  113  2  2  102   44   113 0.994   6.04
 3.07 Intr -  51440  51262  179  1  2   29   80   191 0.992  11.04
 3.06 Intr -  51798  51710   89  0  2   82  110    46 0.999   4.05
 3.05 Intr -  54818  54789   30  2  0  113   81    22 0.721   1.41
 3.04 Intr -  55017  54908  110  1  2   43   76   121 0.189   5.48
 3.03 Intr -  59764  59665  100  1  1   64   33   105 0.191   1.36
 3.02 Intr -  69685  69540  146  2  2   33  101   138 0.595   8.68
 3.01 Init -  73515  73401  115  0  1   47   59    48 0.330  -1.78
 3.00 Prom -  81453  81414   40                              -4.55

 4.00 Prom +  83281  83320   40                              -4.95
 4.01 Init +  94195  94424  230  0  2   80   16   318 0.977  20.74
 4.02 Intr +  94476  94588  113  0  2   20   76   110 0.669   2.10
 4.03 Intr +  95165  95287  123  0  0   98   27    56 0.232   0.14
 4.04 Intr +  95548  95652  105  2  0  122   42    80 0.474   6.07
 4.05 Intr +  99978 100112  135  1  0   87   77   113 0.924   9.72
 4.06 Intr + 100637 100775  139  0  1   42   75    72 0.857  -0.10
 4.07 Intr + 101282 101466  185  2  2   30   68   138 0.937   4.51
 4.08 Intr + 101919 102005   87  1  0   48   83   141 0.995   8.62
 4.09 Intr + 102219 102334  116  1  2   89   82    56 0.984   4.35
 4.10 Intr + 103953 104088  136  2  1   27   85   171 0.999   9.92
 4.11 Intr + 104364 104459   96  1  0   98   71   104 0.997   8.76
 4.12 Intr + 104538 104630   93  1  0   82  115    75 0.996   8.62
 4.13 Term + 105937 106106  170  2  2   69   42   104 0.873   0.96
 4.14 PlyA + 106755 106760    6                               1.05

 5.00 Prom + 107701 107740   40                              -6.15
 5.01 Sngl + 113080 113289  210  0  0   98   42   140 0.927   5.34
 5.02 PlyA + 115810 115815    6                               1.05

 6.13 PlyA - 118769 118764    6                               1.05
 6.12 Term - 125264 125204   61  1  1  105   43    73 0.255   0.80
 6.11 Intr - 139751 139632  120  1  0   10   68   130 0.190   1.89
 6.10 Intr - 142300 142203   98  1  2   51   87   113 0.996   5.39
 6.09 Intr - 144178 144011  168  1  0   17  110   213 0.998  15.62
 6.08 Intr - 146693 146577  117  2  0   71   96   129 0.998  11.74
 6.07 Intr - 146931 146830  102  0  0   76  107    52 0.976   5.35
 6.06 Intr - 157230 157107  124  2  1   67  108   154 0.990  14.97
 6.05 Intr - 159660 159559  102  2  0   96   88    32 0.809   2.37
 6.04 Intr - 164516 164399  118  0  1   75   72   128 0.966   8.50
 6.03 Intr - 167623 167450  174  2  0   94   64    92 0.891   6.39
 6.02 Intr - 170069 169965  105  0  0   28   82   120 0.575   4.67
 6.01 Init - 181395 181341   55  0  1   95   61    20 0.049   1.58
 6.00 Prom - 183393 183354   40                              -2.65

 7.00 Prom + 186804 186843   40                              -1.95
 7.01 Init + 187339 187590  252  0  0   93   61   388 0.951  33.99
 7.02 Term + 187648 187776  129  0  0    2   36   217 0.727   5.10
 7.03 PlyA + 188561 188566    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  55012  54908  105  1  0   80   76   114 0.808   9.67


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:68237222_68442051|GENSCAN_predicted_peptide_1|464_aa
XSSPNCVRPCPSKKFLLPLCSEWLCFPDRTLTGARDISSRPQIRDFVSWTGITTSICSAL
CQATSGIRRPLAYWNSRSNSAAHLSHSLVATPNCHIICHSTSLDSPQQACFATIRGTLNW
VPDILGIVPRTQSAGSLEFGCVYRNPGKEGSANREKGNGGRGQRQRSSRTPILLASIAMK
LPLMEERRPCGTGQAAHTPSMSGPEKSNPIPSYMKAFLPHGSSLDLAYPSLLGMIHLRNM
TEAIAIAVARIVTRTTLEGYSLKCERALGLQSYSLVLNPDLTTLLSDLKKREGAVIIEEL
TQHPPGSMGHSMSVSSVGFLSSSFSVGYDGDDGGYSGSCANALARSNGLLVGNEKITMQT
LNNHLSGLLPGQGERPGRGHLRAGGEGPWLGFDIELQQLSMKAALEGTLEETRALFGAKL
AQIQALVRGVEAQQGDVGADSQQQNQHQWFMDIKSQLEEEITIY

>gi568815588f:68237222_68442051|GENSCAN_predicted_CDS_1|1395_bp
nnctcctctcccaattgtgtaagaccttgtccttctaagaaattccttcttccattatgc
tcagagtggctctgctttcctgaccggaccctgactggagcaagggatatttcatccaga
cctcagatacgagactttgtatcttggacagggattactacttctatctgttcagccctg
tgccaggcaacatcagggataagacggcctttagcctattggaattcacgatccaattct
gcagcacatttgtcccattccctagtggctactcccaattgccatataatttgtcactct
acgtcacttgattcacctcagcaagcttgctttgctactatccgaggaacactgaattgg
gtcccagatattttggggatcgtgccccgaacccagtctgcaggcagcctagaatttggc
tgtgtatacaggaacccaggaaaggaaggaagtgccaatagagagaagggaaatggtggc
agggggcagaggcagaggtcttcaagaactcccattctcttggcgtccattgcaatgaaa
ctacctctgatggaagagaggagaccttgtggtacaggccaggcagcccacactccatca
atgtctggccctgaaaaaagcaaccccatccccagctacatgaaagcttttctcccacat
ggatcatcacttgatcttgcttatccatctctcttgggaatgatccacctgagaaatatg
acagaagccattgccatagctgttgccagaatagtaactagaacaacacttgaggggtat
tccttgaagtgtgaaagggcattaggtttgcagtcgtatagcctggttttgaatccagac
ctaaccactttactgagtgaccttaagaagagagaaggggctgtgatcatcgaggaactc
acacagcatccaccaggatccatgggccacagcatgtcagtatcctctgttggtttcttg
tcctcatccttttctgtgggctatgatggggacgatgggggttacagtggcagctgtgct
aatgccctggccaggtccaatgggctgctggtaggcaacgagaagatcaccatgcagacc
ctcaataaccacctatctggcctcctacctggccaaggtgaacgccctggaagaggtcac
ctgagagctgggggtgaaggtccatggctgggttttgacattgagctgcagcagctcagc
atgaaagccgccctggaaggcacactggaagaaacaagggccctctttggagccaagctg
gcacagatccaggcgctggtcaggggtgttgaagcccagcagggtgacgtgggtgctgac
agccagcagcagaaccagcaccagtggttcatggacatcaagtctcagctggaggaggag
attactatctactga

>gi568815588f:68237222_68442051|GENSCAN_predicted_peptide_2|267_aa
MASSEDDRSGKVHFQAHLCGCWSKASVHCCVGFFLRLLMMRQLASHRARDSREGVHFADS
PCFGSLVTKELSDYNLVSQTDMQMLFGKSENRDLVPHIPAALAMAKRGQGIAQAIASECA
SPKPWQLPHGVEPAGAQKSRTEVWEPLPRFQRMYGNAWLSRQKCAAGMEPSWRTSAKAVR
KGNVGCKPPQRVPTGALPSGAMRGGPLSSRPHNGRSTNSLHHAPGKSTNTQHQPVKAAIR
GAIPCKATGVELPKAVEAHLLHQRGLD

>gi568815588f:68237222_68442051|GENSCAN_predicted_CDS_2|804_bp
atggcatcatctgaggatgaccggagcgggaaggtccacttccaagctcatttatgtggc
tgttggtcaaaggcctcagttcattgctgcgtgggcttcttcttaaggctgctcatgatg
aggcagctggcttcccacagggcaagggattcaagagagggagtccattttgctgactct
ccttgttttggctccctggtcaccaaggagctttctgattacaatttggtttcccaaaca
gatatgcaaatgctgtttgggaaatcagagaatagggacttggtgccccacatcccagct
gctctagccatggctaaaaggggccaaggtatagctcaggccattgcttcagagtgtgca
agtcccaagccttggcagcttccacatggtgttgagcctgcgggagcacagaagtcaaga
actgaggtttgggaacctctgcctagatttcagaggatgtatggaaatgcctggttgtcc
aggcagaagtgtgctgcagggatggagccctcatggagaacctctgctaaggcagtgcgg
aagggaaatgtggggtgcaagcccccacaaagagtccccactggggcactgcctagtgga
gctatgagaggagggccactgtcctccagaccccataatggtagatcaaccaacagcttg
caccatgcacctggaaaatccacaaacactcaacatcagcctgtgaaagcagccataagg
ggggctataccctgcaaagccacaggggtagagctgcccaaggctgtggaagcccatctg
ttgcatcagcgtggcctggattga

>gi568815588f:68237222_68442051|GENSCAN_predicted_peptide_3|293_aa
MLSEISQTQKDKYCIISLSEESKKVDTVEVESRMVVVREEDVKQATSNFENLQKQLARKM
KLPIFIADAFTARAFRGNPAAVCLLENELDEDMHQKIAREMNLSETAFIRKLHPTDNFAQ
KNMNSTLTFVTLSGELRARRAEDGIVLDLPLYPAHPQDFHEVEDLIKTAIGNTLVQDICY
SPDTQKLLVRLSDVYNRSFLENLKVNTENLLQVENTGKVKGLILTLKGEPGGQTQAFDFY
SRYFAPWVGVAEDPVTAFQCSHRGGELGISLRPDGRVDIRGGAAVVLEGTLTA

>gi568815588f:68237222_68442051|GENSCAN_predicted_CDS_3|882_bp
atgctaagtgaaataagccaaacacagaaagacaaatactgcataatctcactcagtgag
gaatctaagaaagttgacactgtagaagtagagagtagaatggtggttgtcagagaagaa
gacgtaaagcaggctaccagcaattttgagaacttgcaaaaacagcttgcaaggaaaatg
aagcttcctattttcatagcagatgcattcacagcaagagcatttcgtgggaatcctgct
gctgtttgcctcctagaaaatgaattggatgaagacatgcatcagaaaattgcaagggag
atgaacctctctgaaactgcttttatccgaaaactgcacccgacagacaactttgcacaa
aaaaacatgaatagcacgctcacgtttgtcactctgagtggagaactaagggccagacga
gcagaggatggcatcgtcctggacttgcctctttatccagcccacccccaggacttccat
gaagtagaggacttgataaagactgccataggcaacacactggtccaggacatctgttat
tctccagatacccaaaagctcctcgtccgcctcagtgacgtttacaacaggtcgtttctg
gagaacctgaaagtgaacacggagaatctgctgcaagttgaaaacacagggaaggtgaaa
gggcttattcttacccttaaaggagagcctggtgggcagacccaagcatttgacttttac
tcaagatattttgcaccgtgggttggtgtggctgaagacccagtgacagcttttcagtgt
tcccaccgaggaggagagctgggaatttcccttcgtccagacggaagggttgacattaga
ggaggtgcagctgttgttttagagggcacactgacagcctag

>gi568815588f:68237222_68442051|GENSCAN_predicted_peptide_4|575_aa
MNTPKKPGSRAAHWDEARWRAASNSGPGEGGGHPAREPKSAPVDAFIFAAQKHSYFSPHN
ANMVDQKIRPAFAGRTTICSRWGQITGELLQSATARFLLHTGRTAIAIAPRRQNGRAACR
WEDLLRWNSVDDAEARSRGHPAFSPFPAGLASAILVSAGLPGLTGLRVTSDADSQDERGW
SWGRKANGDEAFKSNGIEMDWVMKHNGPNDASDGTVRLRGLPFGCSKEEIVQFFQGLEIV
PNGITLTMDYQGRSTGEAFVQFASKEIAENALGKHKERIGHRYIEIFRSSRSEIKGFYDP
PRRLLGQRPGPYDRPIGGRGGYYGAGRGSMYDRMRRGGDGYDGGYGGFDDYGGYNNYGYG
NDGFDDRMRDGRGMGGHGYGGAGDASSGFHGGHFVHMRGLPFRATENDIANFFSPLNPIR
VHIDIGADGRATGEADVEFVTHEDAVAAMSKDKNNMQHRYIELFLNSTPGGGSGMGGSGM
GGYGRDGMDNQGGYGSVGRMGMGNNYSGGYGTPDGLGGYEMLLINVIVGDNSMASVLECF
VSVTNSKIKLVEGGTTYDVYDLGEGAGAAYICGAS

>gi568815588f:68237222_68442051|GENSCAN_predicted_CDS_4|1728_bp
atgaatacacccaagaaacccggatcccgcgcggcacattgggacgaagcgcgctggcgg
gcggccagcaactctgggccaggggaaggaggcggacacccagcccgagagccgaaatcg
gccccagtggacgctttcatcttcgcggcccagaaacactcctatttttcaccgcacaat
gcaaacatggtggaccagaaaatccgccccgcgtttgccggtcgaaccacaatttgttca
cggtgggggcagatcaccggagaacttctccagagcgctacggcacggttccttctacac
actggcagaactgccattgccatcgccccgaggcggcagaatgggagggcggcttgccga
tgggaggacttgctcaggtggaattcagtggacgacgccgaggcccgaagtaggggacat
ccagcattttcccctttccctgctggcttggcctccgccattttggtctcggcagggcta
cctgggctgacgggactgcgagtgacttctgacgcagattcccaagatgagagaggctgg
agctgggggaggaaagccaatggcgacgaagcatttaaatcaaacggtattgagatggat
tgggttatgaaacataatggtccaaatgacgctagtgatgggacagtacgacttcgtgga
ctaccatttggttgcagcaaagaggaaatagttcagttctttcaagggttggaaatcgtg
ccaaatgggataacattgacgatggactaccaggggagaagcacaggggaggccttcgtg
cagtttgcttcaaaggagatagcagaaaatgctctggggaaacacaaggaaagaataggg
cacaggtatattgagatcttcagaagtagcaggagtgaaatcaaaggattttatgatcca
ccaagaagattgctgggacagcgaccgggaccatatgatagaccaataggaggaagaggg
ggttattatggagctgggcgtggaagtatgtatgacagaatgcgacgaggaggtgatgga
tatgatggtggttatggaggttttgatgactatggtggctataataattacggctatggg
aatgatggctttgatgacagaatgagagatggaagaggtatgggaggacatggctatggt
ggagctggtgatgcaagttcaggttttcatggtggtcatttcgtacatatgagagggttg
ccttttcgtgcaactgaaaatgacattgctaatttcttctcaccactaaatccaatacga
gttcatattgatattggagctgatggcagagccacaggagaagcagatgtagagtttgtg
acacatgaagatgcagtagctgccatgtctaaagataaaaataacatgcaacatcgatat
attgaactcttcttgaattctactcctggaggcggctctggcatgggaggttctggaatg
ggaggctacggaagagatggaatggataatcagggaggctatggatcagttggaagaatg
ggaatggggaacaattacagtggaggatatggtactcctgatggtttgggtggttatgaa
atgttattaataaatgtcattgtgggagataatagtatggcgtctgtcctagaatgcttt
gtgtcagttactaattctaaaatcaaattggtagaaggtggtactacatacgatgtctat
gatttaggagagggagccggggcagcctatatatgtggagcctcttga

>gi568815588f:68237222_68442051|GENSCAN_predicted_peptide_5|69_aa
MLGLIKALDLTSSSQATSRQEQVNKHCKQTFRENPECEKLFRTAVLDPSAGQQHGKEKKV
NSDMNPVST

>gi568815588f:68237222_68442051|GENSCAN_predicted_CDS_5|210_bp
atgcttggcctaatcaaggctttagatttaacttccagttcacaggcaacaagtagacag
gaacaagttaacaaacactgcaaacaaacattcagagaaaatccagaatgtgaaaaactg
tttaggacagctgttctagacccttcagctggtcaacagcatggaaaagaaaaaaaagtc
aactcagatatgaatccagtttccacataa

>gi568815588f:68237222_68442051|GENSCAN_predicted_peptide_6|447_aa
MAFSGLGVRGGNLVDGSTAGLAADAVVAAERLEGAAGQAEGASARDRAAAAAMATKDPTA
VERANLLNMAKLSIKGLIESALSFGRTLDSDYPPLQQFFVVMEHCLKHGLKVRKSFLSYN
KTIWGPLELVEKLYPEAEEIGASVRDLPGLKTPLGRARAWLRLALMQKKMADYLRCLIIQ
RDLLSEFYEYHALMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSQLAIAKNNIIKLQEE
NHQLRSENKLILMKTQQHLEVTKVDVETELQTYKHSRQGLDEMYNEARRQLRDESQLRQD
VENELAVQVSMKHEIELAMKLLEKDIHEKQDTLIGLRQQLEEVKAINIEMYQKLQGSEDG
LKEKNEIIARLEEKTNKITAAMRQLEQRLQQAEKAQMEAEDEDEKYLQECLSKSDSLQKQ
ISQKEKQLLCFGVAALRLIEHIARYLE

>gi568815588f:68237222_68442051|GENSCAN_predicted_CDS_6|1344_bp
atggcctttagcgggttgggggtgaggggcgggaacctggtggatgggtcaacagcgggc
ctggctgcagatgcggtggtggccgccgagcgcctggaaggagctgctggacaggccgag
ggagcctccgcccgagaccgcgcagccgccgccgccatggctacaaaagaccccacagct
gtagagagagcaaacttgttaaacatggctaaactgagtatcaaaggactcattgaatct
gctctgagctttggccgcactttggattctgactatccccccttgcagcaattctttgtt
gttatggaacattgcctgaaacacggtcttaaagtaagaaaatcatttttgagttacaac
aaaaccatctggggccctttggaactggtggagaagctgtaccccgaagcagaggaaata
ggagctagtgtccgggatctacctggtctgaagacccctctgggtcgagcaagagcgtgg
cttcgattagccctcatgcaaaaaaaaatggccgattacttacgttgcttaattattcag
agggatctcttgagtgagttttatgagtatcacgcactaatgatggaagaagaaggagca
gtaattgttgggctgctggttggcctgaatgtgatcgatgctaatctgtgtgtgaaggga
gaggatttagactcacaattagcaatagcaaagaataacatcattaaactccaggaagaa
aatcatcaattacgaagtgaaaataaattgattttaatgaaaacacagcagcacctagag
gttaccaaagtagatgtggaaactgagcttcaaacatataagcattctcgtcaggggcta
gatgaaatgtacaatgaagccagaaggcagcttcgagatgaatctcagttacgacaggat
gtagagaatgagctagcagtacaagttagtatgaagcatgagattgaacttgccatgaag
ttgctggagaaagatatccatgagaaacaagatactctgataggccttcgacaacaacta
gaggaagttaaagcaattaacatagagatgtatcaaaagttgcagggttctgaagatggc
ttgaaagaaaaaaatgaaataattgcccgactagaagaaaaaaccaataaaattactgca
gccatgaggcagctggaacaaagattgcagcaagcagagaaggcgcaaatggaagctgaa
gatgaggatgagaaatatctacaagaatgtctcagtaaatctgatagtctgcagaaacaa
atctcccaaaaggagaaacagcttctgtgttttggggtagcagctttgcgcctgattgaa
catattgccagatatttggaataa

>gi568815588f:68237222_68442051|GENSCAN_predicted_peptide_7|126_aa
MKFNPFVNLDRSKNRKRHFHAPLHVHRKIMSSPLSKELRQKYNVRSTPIRKDDEVQVVQG
HYKGQQIGKVVQVYRKKDVIYTEQVVITRLNLNKDRKKIIEHKAKSRQVRKEKGKYKEEL
IEKMQE

>gi568815588f:68237222_68442051|GENSCAN_predicted_CDS_7|381_bp
atgaagttcaatcccttcgtgaacttggaccgcagcaaaaaccgcaaacgtcacttccat
gcccccttgcacgtgcaccggaagatcatgtcatccccgctctccaaggagctgcggcag
aagtacaatgtccgctccacacccatccgcaaggacgacgaggtccaggtagttcaagga
cactacaaaggtcagcaaattggcaaggtagtccaggtgtacagaaagaaagatgtcatc
tacactgagcaggtggttatcaccaggctaaatctcaacaaggatcggaaaaaaattatt
gaacacaaagccaagtctcgacaagtcagaaaagagaaaggcaaatataaggaggaactt
attgagaaaatgcaggaataa