Result of FASTA (omim) for
pF1KE0671
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0671, 258 aa
1>>>pF1KE0671 258 - 258 aa - 258 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.0050+/-0.00029; mu= 3.9969+/- 0.018
mean_var=174.1664+/-35.038, 0's: 0 Z-trim(123.0): 56 B-trim: 0 in 0/60
Lambda= 0.097183
statistics sampled from 41987 (42046) to 41987 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.803), E-opt: 0.2 (0.493), width: 16
Scan time: 7.170
The best scores are: opt bits E(85289)
NP_659508 (OMIM: 602441,607948,611162,614383) cyto ( 258) 1763 258.3 1e-68
XP_011531631 (OMIM: 602441,607948,611162,614383) P ( 264) 1713 251.3 1.3e-66
NP_037456 (OMIM: 602441,607948,611162,614383) cyto ( 275) 1713 251.3 1.4e-66
NP_001257400 (OMIM: 605117) suppressor of cytokine ( 198) 397 66.7 3.7e-11
NP_001257397 (OMIM: 605117) suppressor of cytokine ( 198) 397 66.7 3.7e-11
NP_001257398 (OMIM: 605117) suppressor of cytokine ( 198) 397 66.7 3.7e-11
NP_003868 (OMIM: 605117) suppressor of cytokine si ( 198) 397 66.7 3.7e-11
NP_001257396 (OMIM: 605117) suppressor of cytokine ( 198) 397 66.7 3.7e-11
XP_016875645 (OMIM: 605117) PREDICTED: suppressor ( 198) 397 66.7 3.7e-11
NP_001257399 (OMIM: 605117) suppressor of cytokine ( 198) 397 66.7 3.7e-11
XP_011537238 (OMIM: 605117) PREDICTED: suppressor ( 204) 397 66.7 3.8e-11
XP_011537237 (OMIM: 605117) PREDICTED: suppressor ( 212) 397 66.7 3.9e-11
XP_011537231 (OMIM: 605117) PREDICTED: suppressor ( 220) 397 66.7 4.1e-11
XP_016875644 (OMIM: 605117) PREDICTED: suppressor ( 222) 397 66.7 4.1e-11
XP_016875636 (OMIM: 605117) PREDICTED: suppressor ( 243) 397 66.7 4.4e-11
XP_016875643 (OMIM: 605117) PREDICTED: suppressor ( 243) 397 66.7 4.4e-11
XP_016875637 (OMIM: 605117) PREDICTED: suppressor ( 243) 397 66.7 4.4e-11
XP_016875639 (OMIM: 605117) PREDICTED: suppressor ( 243) 397 66.7 4.4e-11
XP_016875642 (OMIM: 605117) PREDICTED: suppressor ( 243) 397 66.7 4.4e-11
XP_016875638 (OMIM: 605117) PREDICTED: suppressor ( 243) 397 66.7 4.4e-11
XP_016875640 (OMIM: 605117) PREDICTED: suppressor ( 243) 397 66.7 4.4e-11
XP_016875641 (OMIM: 605117) PREDICTED: suppressor ( 243) 397 66.7 4.4e-11
NP_003946 (OMIM: 604176) suppressor of cytokine si ( 225) 349 60.0 4.4e-09
NP_003736 (OMIM: 603597) suppressor of cytokine si ( 211) 227 42.8 0.00059
XP_005266840 (OMIM: 605118) PREDICTED: suppressor ( 535) 213 41.2 0.0047
XP_016881576 (OMIM: 605118) PREDICTED: suppressor ( 535) 213 41.2 0.0047
XP_016881575 (OMIM: 605118) PREDICTED: suppressor ( 535) 213 41.2 0.0047
NP_004223 (OMIM: 605118) suppressor of cytokine si ( 535) 213 41.2 0.0047
NP_955453 (OMIM: 616337) suppressor of cytokine si ( 440) 207 40.3 0.0073
XP_011534727 (OMIM: 616337) PREDICTED: suppressor ( 440) 207 40.3 0.0073
XP_011534728 (OMIM: 616337) PREDICTED: suppressor ( 440) 207 40.3 0.0073
NP_543143 (OMIM: 616337) suppressor of cytokine si ( 440) 207 40.3 0.0073
XP_016880041 (OMIM: 608788) PREDICTED: suppressor ( 576) 206 40.2 0.0099
>>NP_659508 (OMIM: 602441,607948,611162,614383) cytokine (258 aa)
initn: 1763 init1: 1763 opt: 1763 Z-score: 1354.7 bits: 258.3 E(85289): 1e-68
Smith-Waterman score: 1763; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258)
10 20 30 40 50 60
pF1KE0 MVLCVQGPRPLLAVERTGQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 MVLCVQGPRPLLAVERTGQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 LDPEEDLLCIAKTFSYLRESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 LDPEEDLLCIAKTFSYLRESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 KTTRGPTNVRIEYADSSFRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 KTTRGPTNVRIEYADSSFRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAP
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 TPALPMPKEDAPSDPALPAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_659 TPALPMPKEDAPSDPALPAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDC
190 200 210 220 230 240
250
pF1KE0 LPLPRRMADYLRQYPFQL
::::::::::::::::::
NP_659 LPLPRRMADYLRQYPFQL
250
>>XP_011531631 (OMIM: 602441,607948,611162,614383) PREDI (264 aa)
initn: 1713 init1: 1713 opt: 1713 Z-score: 1316.7 bits: 251.3 E(85289): 1.3e-66
Smith-Waterman score: 1713; 100.0% identity (100.0% similar) in 251 aa overlap (8-258:14-264)
10 20 30 40 50
pF1KE0 MVLCVQGPRPLLAVERTGQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQT
:::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGPPLTAHPLPSRPRPLLAVERTGQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQT
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 ESEPKVLDPEEDLLCIAKTFSYLRESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESEPKVLDPEEDLLCIAKTFSYLRESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE0 LFTLSVKTTRGPTNVRIEYADSSFRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LFTLSVKTTRGPTNVRIEYADSSFRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSD
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE0 SPDPAPTPALPMPKEDAPSDPALPAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPDPAPTPALPMPKEDAPSDPALPAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRL
190 200 210 220 230 240
240 250
pF1KE0 VADVDCLPLPRRMADYLRQYPFQL
::::::::::::::::::::::::
XP_011 VADVDCLPLPRRMADYLRQYPFQL
250 260
>>NP_037456 (OMIM: 602441,607948,611162,614383) cytokine (275 aa)
initn: 1713 init1: 1713 opt: 1713 Z-score: 1316.4 bits: 251.3 E(85289): 1.4e-66
Smith-Waterman score: 1713; 100.0% identity (100.0% similar) in 251 aa overlap (8-258:25-275)
10 20 30 40
pF1KE0 MVLCVQGPRPLLAVERTGQRPLWAPSLELPKPVMQPLPAGAFL
::::::::::::::::::::::::::::::::::::
NP_037 MYLEHTSHCPHHDDDTAMDTPLPRPRPLLAVERTGQRPLWAPSLELPKPVMQPLPAGAFL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE0 EEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYLRESGWYWGSITASEARQHLQKMPEGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 EEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYLRESGWYWGSITASEARQHLQKMPEGT
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE0 FLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSSFRLDSNCLSRPRILAFPDVVSLVQHY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 FLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSSFRLDSNCLSRPRILAFPDVVSLVQHY
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE0 VASCTADTRSDSPDPAPTPALPMPKEDAPSDPALPAPPPATAVHLKLVQPFVRRSSARSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 VASCTADTRSDSPDPAPTPALPMPKEDAPSDPALPAPPPATAVHLKLVQPFVRRSSARSL
190 200 210 220 230 240
230 240 250
pF1KE0 QHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQL
:::::::::::::::::::::::::::::::::::
NP_037 QHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQL
250 260 270
>>NP_001257400 (OMIM: 605117) suppressor of cytokine sig (198 aa)
initn: 540 init1: 383 opt: 397 Z-score: 321.2 bits: 66.7 E(85289): 3.7e-11
Smith-Waterman score: 519; 41.7% identity (65.4% similar) in 211 aa overlap (48-258:14-198)
20 30 40 50 60 70
pF1KE0 GQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYL
::: .: . .. .: . .::.. :
NP_001 MTLRCLEPSGNGGEGTRSQWGTAGSAEEPSPQAARLAKALREL
10 20 30 40
80 90 100 110 120 130
pF1KE0 RESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSS
..::::::.:..::...:.. ::::::.:::.: .::.:.::::. ::::.:::: :..
NP_001 GQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE0 FRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAPTPALPMPKEDAPSDPAL
::::: . .. : .:: :...:: : : :.
NP_001 FRLDSIICVKSKLKQFDSVVHLIDYYVQMCK-DKRTG-----------------------
110 120 130
200 210 220 230 240 250
pF1KE0 PAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQ
: : .::: :..:. .:: ::::::::.::. .. . :::: :. :::..: ::
NP_001 PEAPRNGTVHLYLTKPL--YTSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQ
140 150 160 170 180 190
pF1KE0 L
.
NP_001 V
>>NP_001257397 (OMIM: 605117) suppressor of cytokine sig (198 aa)
initn: 540 init1: 383 opt: 397 Z-score: 321.2 bits: 66.7 E(85289): 3.7e-11
Smith-Waterman score: 519; 41.7% identity (65.4% similar) in 211 aa overlap (48-258:14-198)
20 30 40 50 60 70
pF1KE0 GQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYL
::: .: . .. .: . .::.. :
NP_001 MTLRCLEPSGNGGEGTRSQWGTAGSAEEPSPQAARLAKALREL
10 20 30 40
80 90 100 110 120 130
pF1KE0 RESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSS
..::::::.:..::...:.. ::::::.:::.: .::.:.::::. ::::.:::: :..
NP_001 GQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE0 FRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAPTPALPMPKEDAPSDPAL
::::: . .. : .:: :...:: : : :.
NP_001 FRLDSIICVKSKLKQFDSVVHLIDYYVQMCK-DKRTG-----------------------
110 120 130
200 210 220 230 240 250
pF1KE0 PAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQ
: : .::: :..:. .:: ::::::::.::. .. . :::: :. :::..: ::
NP_001 PEAPRNGTVHLYLTKPL--YTSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQ
140 150 160 170 180 190
pF1KE0 L
.
NP_001 V
>>NP_001257398 (OMIM: 605117) suppressor of cytokine sig (198 aa)
initn: 540 init1: 383 opt: 397 Z-score: 321.2 bits: 66.7 E(85289): 3.7e-11
Smith-Waterman score: 519; 41.7% identity (65.4% similar) in 211 aa overlap (48-258:14-198)
20 30 40 50 60 70
pF1KE0 GQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYL
::: .: . .. .: . .::.. :
NP_001 MTLRCLEPSGNGGEGTRSQWGTAGSAEEPSPQAARLAKALREL
10 20 30 40
80 90 100 110 120 130
pF1KE0 RESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSS
..::::::.:..::...:.. ::::::.:::.: .::.:.::::. ::::.:::: :..
NP_001 GQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE0 FRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAPTPALPMPKEDAPSDPAL
::::: . .. : .:: :...:: : : :.
NP_001 FRLDSIICVKSKLKQFDSVVHLIDYYVQMCK-DKRTG-----------------------
110 120 130
200 210 220 230 240 250
pF1KE0 PAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQ
: : .::: :..:. .:: ::::::::.::. .. . :::: :. :::..: ::
NP_001 PEAPRNGTVHLYLTKPL--YTSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQ
140 150 160 170 180 190
pF1KE0 L
.
NP_001 V
>>NP_003868 (OMIM: 605117) suppressor of cytokine signal (198 aa)
initn: 540 init1: 383 opt: 397 Z-score: 321.2 bits: 66.7 E(85289): 3.7e-11
Smith-Waterman score: 519; 41.7% identity (65.4% similar) in 211 aa overlap (48-258:14-198)
20 30 40 50 60 70
pF1KE0 GQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYL
::: .: . .. .: . .::.. :
NP_003 MTLRCLEPSGNGGEGTRSQWGTAGSAEEPSPQAARLAKALREL
10 20 30 40
80 90 100 110 120 130
pF1KE0 RESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSS
..::::::.:..::...:.. ::::::.:::.: .::.:.::::. ::::.:::: :..
NP_003 GQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE0 FRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAPTPALPMPKEDAPSDPAL
::::: . .. : .:: :...:: : : :.
NP_003 FRLDSIICVKSKLKQFDSVVHLIDYYVQMCK-DKRTG-----------------------
110 120 130
200 210 220 230 240 250
pF1KE0 PAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQ
: : .::: :..:. .:: ::::::::.::. .. . :::: :. :::..: ::
NP_003 PEAPRNGTVHLYLTKPL--YTSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQ
140 150 160 170 180 190
pF1KE0 L
.
NP_003 V
>>NP_001257396 (OMIM: 605117) suppressor of cytokine sig (198 aa)
initn: 540 init1: 383 opt: 397 Z-score: 321.2 bits: 66.7 E(85289): 3.7e-11
Smith-Waterman score: 519; 41.7% identity (65.4% similar) in 211 aa overlap (48-258:14-198)
20 30 40 50 60 70
pF1KE0 GQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYL
::: .: . .. .: . .::.. :
NP_001 MTLRCLEPSGNGGEGTRSQWGTAGSAEEPSPQAARLAKALREL
10 20 30 40
80 90 100 110 120 130
pF1KE0 RESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSS
..::::::.:..::...:.. ::::::.:::.: .::.:.::::. ::::.:::: :..
NP_001 GQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE0 FRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAPTPALPMPKEDAPSDPAL
::::: . .. : .:: :...:: : : :.
NP_001 FRLDSIICVKSKLKQFDSVVHLIDYYVQMCK-DKRTG-----------------------
110 120 130
200 210 220 230 240 250
pF1KE0 PAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQ
: : .::: :..:. .:: ::::::::.::. .. . :::: :. :::..: ::
NP_001 PEAPRNGTVHLYLTKPL--YTSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQ
140 150 160 170 180 190
pF1KE0 L
.
NP_001 V
>>XP_016875645 (OMIM: 605117) PREDICTED: suppressor of c (198 aa)
initn: 540 init1: 383 opt: 397 Z-score: 321.2 bits: 66.7 E(85289): 3.7e-11
Smith-Waterman score: 519; 41.7% identity (65.4% similar) in 211 aa overlap (48-258:14-198)
20 30 40 50 60 70
pF1KE0 GQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYL
::: .: . .. .: . .::.. :
XP_016 MTLRCLEPSGNGGEGTRSQWGTAGSAEEPSPQAARLAKALREL
10 20 30 40
80 90 100 110 120 130
pF1KE0 RESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSS
..::::::.:..::...:.. ::::::.:::.: .::.:.::::. ::::.:::: :..
XP_016 GQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE0 FRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAPTPALPMPKEDAPSDPAL
::::: . .. : .:: :...:: : : :.
XP_016 FRLDSIICVKSKLKQFDSVVHLIDYYVQMCK-DKRTG-----------------------
110 120 130
200 210 220 230 240 250
pF1KE0 PAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQ
: : .::: :..:. .:: ::::::::.::. .. . :::: :. :::..: ::
XP_016 PEAPRNGTVHLYLTKPL--YTSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQ
140 150 160 170 180 190
pF1KE0 L
.
XP_016 V
>>NP_001257399 (OMIM: 605117) suppressor of cytokine sig (198 aa)
initn: 540 init1: 383 opt: 397 Z-score: 321.2 bits: 66.7 E(85289): 3.7e-11
Smith-Waterman score: 519; 41.7% identity (65.4% similar) in 211 aa overlap (48-258:14-198)
20 30 40 50 60 70
pF1KE0 GQRPLWAPSLELPKPVMQPLPAGAFLEEVAEGTPAQTESEPKVLDPEEDLLCIAKTFSYL
::: .: . .. .: . .::.. :
NP_001 MTLRCLEPSGNGGEGTRSQWGTAGSAEEPSPQAARLAKALREL
10 20 30 40
80 90 100 110 120 130
pF1KE0 RESGWYWGSITASEARQHLQKMPEGTFLVRDSTHPSYLFTLSVKTTRGPTNVRIEYADSS
..::::::.:..::...:.. ::::::.:::.: .::.:.::::. ::::.:::: :..
NP_001 GQTGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE0 FRLDSNCLSRPRILAFPDVVSLVQHYVASCTADTRSDSPDPAPTPALPMPKEDAPSDPAL
::::: . .. : .:: :...:: : : :.
NP_001 FRLDSIICVKSKLKQFDSVVHLIDYYVQMCK-DKRTG-----------------------
110 120 130
200 210 220 230 240 250
pF1KE0 PAPPPATAVHLKLVQPFVRRSSARSLQHLCRLVINRLVADVDCLPLPRRMADYLRQYPFQ
: : .::: :..:. .:: ::::::::.::. .. . :::: :. :::..: ::
NP_001 PEAPRNGTVHLYLTKPL--YTSAPSLQHLCRLTINKCTGAIWGLPLPTRLKDYLEEYKFQ
140 150 160 170 180 190
pF1KE0 L
.
NP_001 V
258 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 18:08:28 2016 done: Wed Nov 2 18:08:29 2016
Total Scan time: 7.170 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]