GENSCAN 1.0	Date run:  2-Nov-116	Time: 18:33:52

Sequence gi568815592f:17181582_17392116 : 210535 bp : 42.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    316    311    6                               1.05
 1.03 Term -   2233   2162   72  1  0   92   48    43 0.003  -2.37
 1.02 Intr -  19401  18853  549  0  0   34   55   357 0.571  19.14
 1.01 Init -  20174  20079   96  2  0   99   54    28 0.745   0.87
 1.00 Prom -  21112  21073   40                              -7.85

 2.04 PlyA -  21506  21501    6                               1.05
 2.03 Term -  24233  24151   83  0  2   53   48   121 0.718   1.48
 2.02 Intr -  24802  24686  117  2  0   88   76    66 0.676   4.92
 2.01 Init -  45711  45627   85  0  1   57   96    74 0.174   6.13
 2.00 Prom -  47375  47336   40                              -2.05

 3.00 Prom +  50069  50108   40                              -5.65
 3.01 Init +  54255  54335   81  2  0   73   72    71 0.810   5.02
 3.02 Intr +  55960  56058   99  0  0   98   61    63 0.350   3.99
 3.03 Term +  68018  68041   24  1  0  106   48    34 0.227  -1.55
 3.04 PlyA +  68066  68071    6                               1.05

 4.00 Prom +  79247  79286   40                              -5.65
 4.01 Init +  84092  84231  140  1  2   62   97   141 0.621  12.06
 4.02 Intr +  99910 100168  259  1  1    3   78   348 0.063  21.84
 4.03 Intr + 101224 101347  124  0  1   42   94   161 0.941  11.34
 4.04 Intr + 103076 103130   55  0  1   25  114    23 0.454  -4.28
 4.05 Term + 110175 110538  364  0  1  108   41   502 0.589  40.55
 4.06 PlyA + 111426 111431    6                               1.05

 5.00 Prom + 119816 119855   40                              -6.75
 5.01 Init + 125229 125238   10  2  1   91  106     5 0.901   3.22
 5.02 Intr + 127107 127193   87  1  0   88   42    85 0.392   2.92
 5.03 Term + 130058 130203  146  0  2   85   54   111 0.450   4.49
 5.04 PlyA + 131041 131046    6                               1.05

 6.02 PlyA - 134159 134154    6                               1.05
 6.01 Sngl - 144546 143782  765  0  0   83   47   349 0.889  24.14
 6.00 Prom - 148249 148210   40                              -4.75

 7.05 PlyA - 148367 148362    6                               1.05
 7.04 Term - 153367 153196  172  0  1   19   48   136 0.541  -0.98
 7.03 Intr - 161112 160902  211  1  1   76   95    81 0.047   4.65
 7.02 Intr - 167807 167708  100  2  1   62  103    61 0.179   3.76
 7.01 Init - 171654 171649    6  0  0   75   93     0 0.223   0.23
 7.00 Prom - 183626 183587   40                              -3.05

 8.00 Prom + 189184 189223   40                              -4.95
 8.01 Sngl + 202398 202703  306  2  0   71   42   186 0.095   5.95
 8.02 PlyA + 203437 203442    6                               1.05

 9.03 PlyA - 204128 204123    6                               1.05
 9.02 Term - 204330 204220  111  0  0   93   49   130 0.585   7.18
 9.01 Init - 210470 210309  162  2  0   62   80   124 0.505   8.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100168  168  1  0   85   78   249 0.868  23.18


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_1|238_aa
MGELYLELVDSWFMLTSRMKLHTLVVSQFLNMRDRKVLQLRTRLRSPASFTSDWSSLQGV
WGTQPGQSGSPEEAPPGQPRGKEGKRERRRAAIVANDRAKKEGRFMHGTQPPIKPSRRQP
AAPSAGLAKPAEPAPTQNPCRPASGVRSPSSSPRLSLHTFPPVEGAGFGLGQPQRGALTV
QLRAEGLLERGQSRHRGRGGARGLLACCHLSGSPETSQIYTLYILEDVKNSSHDRELF

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_1|717_bp
atgggtgaactgtatctggaattggtggattcttggtttatgttgacctcaagaatgaag
ctgcacaccctggtggtgtcacagttcttaaacatgcgagacagaaaagttctccaactg
cgaacccgtctcagaagcccagcgagcttcacctctgactggagctcgctgcagggagtt
tggggcacccagcctgggcagtccggcagcccagaggaagctcctcccggacaaccaaga
ggaaaagagggaaagcgagaaagacggagagccgccatcgtggccaacgaccgcgcgaag
aaggaagggcgattcatgcacgggacccagcctccaatcaagcccagcaggcgccagccg
gcggcgccgagtgcagggctcgcgaagcccgccgagcctgcgcccacccagaacccgtgc
cggcccgcgagcggtgtgcgcagccccagctccagcccgcgtctctctcttcacactttc
ccgccagtagagggagccggctttggcctcggccagccccagagaggggccctcacagtg
cagctgcgggctgaagggctccttgagcgtggccagagcagacaccgaggccgaggaggc
gcccgagggctgctagcatgttgtcacctctcaggatcacccgagacctctcagatctac
actctgtacattctggaagatgtgaagaatagttcacatgacagagaactattctaa

>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_2|94_aa
MLPLDTDGGSHRFSVKNAIGVKMQLEATGAGSSRRSQLRSSVGWGLGELLCLARGLSMHQ
SALCLAKEVCSFIPEVSKTTNPPEETNNSKPATF

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_2|285_bp
atgctcccacttgacactgatggaggaagtcaccgattttcagttaaaaatgcgatagga
gtgaaaatgcagttagaagctacaggcgcaggatccagtaggcgaagccagctgcgctcc
tcagtcgggtggggacttggagaacttttatgtctagctagaggattgtcaatgcaccaa
tcagcactctgtctagctaaagaggtctgcagcttcattcctgaagtcagcaagaccacg
aacccaccggaagagacgaacaactccaagcctgccaccttttaa

>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_3|67_aa
MSFLRGKRRDGCRDSGERKGEGIQGGQVGFDTRNQAADTSSLLVRFKMPPRKEKEGAHFL
LGLQYDV

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_3|204_bp
atgagctttctgagaggaaagaggagagatggctgcagagactctggagagagaaaaggt
gaaggaattcagggtggccaggtgggttttgacacaagaaatcaggctgccgacacttct
tcactgttagttagatttaaaatgcctccaagaaaagagaaagagggagcacacttcctt
ctagggcttcagtatgatgtttga

>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_4|313_aa
MRPPKIVSDKIMAKENIPFIQYIDDIMLIGPTEEEVETLVLHMDFRRVRETRSRRRRRSR
CPSRSRSRSPSRGAGAKMHTTQKDTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVI
TDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRIMQPGFAFGV
QQLHPALIQRPFGIPAHYVYPQAFVQPGVVIPHVQPTAAAASTTPYIDYTGAAYAQYSAA
AAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQPITAAAPGTAAAAAAAAAAAAAFG
QYQPQQLQTDRMQ

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_4|942_bp
atgaggccccccaaaattgtttctgacaaaataatggccaaagagaacatcccatttatc
cagtatattgatgacatcatgctaattggaccaactgaggaagaagtggagaccttggta
ttacacatggacttcagaagggtgcgggagacgcggagccggaggaggaggcgcagccgc
tgcccgagccgcagccgcagccggagcccgagccgcggggcgggtgcgaagatgcacacg
acccagaaggacacgacgtacaccaagatcttcgtcggggggctgccctaccacaccacc
gacgccagcctgcgcaagtacttcgaggtcttcggcgagatcgaggaggcggtggtcatc
accgaccggcagacgggcaagtcccggggctatggatttgtcaccatggctgaccgggct
gctgccgaaagggcctgcaaggatcccaatcccatcattgatggcagaaaggccaacgtg
aacctggcatacttaggagcaaaaccaaggatcatgcaaccaggttttgcctttggtgtt
caacaacttcatccagcccttatacaaagacctttcgggatacctgcccactatgtctat
ccgcaggcttttgtgcagccgggagtggtcattccacacgtccagccgacagcagctgcc
gcctccaccaccccttacattgattacactggagctgcatacgcacaatactcagcagct
gctgctgctgccgccgccgctgctgcctatgaccagtacccctatgcagcctctccagct
gctgcaggatatgttactgctgggggctatggctacgcagtccagcagccaatcaccgca
gcggcacctgggacagctgccgccgccgctgcagcagctgctgccgctgcagcatttggc
cagtaccagcctcagcagctgcagacagaccgaatgcaatag

>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_5|80_aa
MLQNIEEMLVNTDMDASIKTVERLQEHASASETHLIPLLFTQPEKRHSAFEQQLERQPPS
HCLGRARTWAAIRRHLCPLK

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_5|243_bp
atgctacaaaacatagaagagatgttagttaacactgatatggatgcaagcataaaaact
gtagaaaggctacaggaacatgcaagtgcatcagagactcacctgatacctctgctattc
actcagcctgagaaaaggcactctgcctttgagcagcagcttgaacgacagccaccctca
cattgccttgggcgagcacgcacgtgggctgctatacggagacatctgtgcccgctgaag
tga

>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_6|254_aa
MTFHPMLLPSVFPPGSNHPASDSDSSPSPRHTRSQTQHAQQPAPILPLQEVATAEGIICV
HVPFSLSDLSQIEKCLGFFSSDPNTYIKEFKYLTQSYELTWHDLYIILSSTLLSEEKERV
WLAAQAHADDLHRQDPTKSTGAAAAPQEEPPWKYQPTDPDRASCNHMIICLIIGLNKAAH
KAVNFEKLKEISQRANKNPAEFLSRLTEALQIYTHIDPTSQEGTIVLNTHFISQSAPDIQ
CKLKTAEDGPQTPQ

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_6|765_bp
atgaccttccaccccatgctcctgccctctgtctttccccccggctccaaccacccagct
tctgactctgattcatccccatctccacgtcatacccgctctcaaactcagcatgcccaa
caaccagcccccatacttcccctccaagaggtggccacagccgaaggcatcatttgcgtc
cacgttcctttctccctctctgacctctcccaaattgaaaaatgtctcgggttcttttcc
tctgatcccaacacttacatcaaagaatttaaatatctcacccaatcttatgaacttact
tggcatgatctctacattatcctctcttctactctcctttcagaagaaaaggaaagagtg
tggcttgcagcacaggcgcatgcagatgatcttcatcggcaagaccctactaagtccaca
ggggctgctgcagctccccaggaggaacccccctggaagtaccaacccacagaccccgac
cgggcatcttgtaaccatatgattatttgcctcatcataggccttaacaaagcagcccat
aaagctgtaaattttgaaaagctcaaagaaatctcccaaagagccaacaaaaaccctgcc
gaatttctttcccgccttacagaggccctccaaatatatacccacattgaccccacctcc
caggaaggaactattgttcttaatacccatttcatctctcagtctgctcctgacatacaa
tgcaaacttaaaacagctgaagatggcccccaaaccccacaataa

>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_7|162_aa
MQCVSRTKSQLCTFILEKVIYGGAPETDKEDHRTSVTTPTLPLTIECQHLGPTILESNYY
HCIYVFQLSDYGSHCKVWSTEKSSHRALQGFRGSPYKSISQGIGESAYKATGINKCKKNA
GSTQGPKDPLKGFSEEKELTSTNPSEYKEKSGHKWEPAETMN

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_7|489_bp
atgcagtgtgtgagcaggacaaagtctcagctgtgcacatttatccttgagaaagtgata
tatggtggagcaccagagacagacaaagaagaccacagaactagtgtaactacccctaca
ttgcctttgaccattgagtgccagcacttgggacctaccatcttggaatctaattattac
cattgcatttatgtttttcaattaagtgactacggttcccactgtaaggtatggtctaca
gagaagagcagtcacagagctcttcagggattcaggggctctccttacaaatctatttct
caaggcattggtgaaagtgcctataaggcaactgggataaacaagtgcaagaagaatgct
ggttcaacccaaggcccaaaggatcctcttaaaggattctcagaggagaaggagctcaca
agcacaaatccctcagaatataaggaaaaaagtggccataaatgggagccagcggaaaca
atgaattga

>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_8|101_aa
MPAAQPAMLAILAPWAVLVLSVLTGRIVHSAFPAACSWACLHVHIAVGPPWESSPLLSQS
LRLQFAKCPALMNPWKVEAWGKSQHQGGPQLPSSHHRSTHY

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_8|306_bp
atgcccgcagcccagccagccatgctcgccatcctggcaccgtgggctgtcttggttctg
tctgtcctcactggccgcatagtgcattctgcctttcctgctgcctgctcctgggcctgc
ctgcatgtgcacattgctgtggggcccccatgggaatcctcacctcttttgtctcagtca
ctgcgcctccagtttgccaagtgtccagctcttatgaatccctggaaagtagaagcctgg
ggaaagagccaacaccaaggaggcccccagctcccttcttcacaccaccgttccactcac
tattaa

>gi568815592f:17181582_17392116|GENSCAN_predicted_peptide_9|90_aa
MKVESSCGNETLRVDCGGKTLKMMGRDKSGEVIKDGMYEGQSVSLAGLEGCGSQDYLYHH
VTKGENSSPAVSGFLSCRHENLITPGKFLN

>gi568815592f:17181582_17392116|GENSCAN_predicted_CDS_9|273_bp
atgaaagttgagtcttcatgcggaaatgagacattaagagtggattgtggaggaaaaacc
ctcaagatgatgggcagggacaaaagtggagaggtaataaaggatggcatgtatgaagga
cagtctgtgagtttagctggattggagggctgtggaagccaggattatctctatcatcat
gtgactaaaggagaaaatagctccccagctgtcagtggctttctcagctgccgacatgag
aacttgatcacaccggggaaattcctgaactaa