GENSCAN 1.0	Date run:  2-Nov-116	Time: 18:51:20

Sequence gi568815586r:120362022_120569609 : 207588 bp : 46.99% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   1114   1022   93  1  0  112   98   150 0.960  18.56
 1.05 Intr -   2734   2693   42  1  0   97  100    14 0.737   1.94
 1.04 Intr -   6071   5987   85  1  1   53   79    84 0.608   3.82
 1.03 Intr -   6252   6171   82  1  1   35   99   134 0.986   7.90
 1.02 Intr -   6466   6396   71  0  2   66   40    64 0.626  -1.77
 1.01 Init -   6960   6812  149  0  2  121   84    97 0.680  10.17
 1.00 Prom -  21238  21199   40                              -4.76

 2.04 PlyA -  22349  22344    6                               1.05
 2.03 Term -  27003  26925   79  2  1   77   38   106 0.823   1.74
 2.02 Intr -  31337  31276   62  2  2   77  107    32 0.718   1.53
 2.01 Init -  33777  33724   54  0  0   92   90    59 0.814   5.78
 2.00 Prom -  50144  50105   40                              -1.96

 3.00 Prom +  50277  50316   40                              -3.86
 3.01 Init +  76106  76208  103  1  1   85   84    74 0.818   5.65
 3.02 Intr +  76358  76500  143  0  2   85  107   240 0.941  25.67
 3.03 Term +  78759  78842   84  2  0   92   44    51 0.665  -1.25
 3.04 PlyA +  81379  81384    6                               1.05

 4.03 PlyA -  81970  81965    6                               1.05
 4.02 Term -  82934  82851   84  2  0   97   43   101 0.996   4.15
 4.01 Init -  84351  84205  147  0  0   97   99   298 0.636  31.89
 4.00 Prom -  84399  84360   40                             -16.83

 5.00 Prom +  84417  84456   40                             -16.89
 5.01 Init +  84460  84540   81  0  0   53  103   115 0.999   8.49
 5.02 Intr +  84636  84808  173  2  2  121   97   359 0.997  38.84
 5.03 Intr +  95055  95158  104  0  2   70   98   142 0.974  13.22
 5.04 Term +  96606  96613    8  1  2  121   42     0 0.606  -3.27
 5.05 PlyA +  97680  97685    6                              -0.45

 6.05 PlyA -  99376  99371    6                               1.05
 6.04 Term - 100141  99998  144  1  0  117   53    47 0.825   2.01
 6.03 Intr - 102086 101929  158  0  2   51   90   191 0.677  15.33
 6.02 Intr - 103766 103675   92  1  2   98   47   103 0.594   6.84
 6.01 Init - 107588 107401  188  2  2   34   93   527 0.997  46.33
 6.00 Prom - 109773 109734   40                              -4.16

 7.00 Prom + 123020 123059   40                              -4.46
 7.01 Init + 134401 134532  132  0  0   76  100   232 0.897  23.34
 7.02 Term + 136052 136189  138  1  0  116   42   130 0.993   9.16
 7.03 PlyA + 136452 136457    6                               1.05

 8.08 PlyA - 137380 137375    6                               1.05
 8.07 Term - 141864 141763  102  0  0  124   31   107 0.999   6.88
 8.06 Intr - 142060 141949  112  0  1   89   80    94 0.951   9.08
 8.05 Intr - 142962 142874   89  0  2   60   52    24 0.638  -5.23
 8.04 Intr - 148102 147996  107  2  2   86   80   177 0.842  16.63
 8.03 Intr - 154767 154546  222  1  0   96  105   172 0.998  17.80
 8.02 Intr - 160342 160193  150  2  0   48   95   110 0.989   7.83
 8.01 Init - 160970 160604  367  2  1   77   50   262 0.583  18.49
 8.00 Prom - 161681 161642   40                              -9.46

 9.00 Prom + 163427 163466   40                              -3.06
 9.01 Init + 164287 164645  359  0  2   60   33   289 0.175  17.18
 9.02 Intr + 172314 172368   55  0  1   60   57    69 0.437  -0.02
 9.03 Term + 172637 172936  300  1  0   92   40   340 0.837  24.82
 9.04 PlyA + 173575 173580    6                               1.05

10.00 Prom + 176028 176067   40                              -6.36
10.01 Init + 181924 181975   52  0  1   64  105    22 0.674   0.82
10.02 Intr + 184384 184580  197  2  2  106   64   136 0.981  12.13
10.03 Intr + 190478 190677  200  1  2  109   89    25 0.987   2.85
10.04 Intr + 192697 192787   91  1  1  111   89    90 0.963  11.40
10.05 Intr + 195261 195445  185  2  2   54   78    10 0.516  -4.81
10.06 Intr + 195525 195661  137  0  2   39  105    74 0.578   4.41
10.07 Intr + 198705 198865  161  1  2   70  100   230 0.997  22.11
10.08 Intr + 201326 201602  277  1  1   12  100   199 0.628  10.59
10.09 Intr + 201789 201922  134  1  2   44   78   210 0.999  15.96
10.10 Intr + 203051 203168  118  1  1   76   94    15 0.984   0.94
10.11 Intr + 203407 203508  102  2  0   57   84   152 0.998  11.85
10.12 Intr + 204804 204959  156  1  0   87   97    74 0.475   8.18

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_1|174_aa
MADPGPAGPPRSPGPRPLRPGARRSRGPFVSLLLPQQDVHRGTQLADYAGPARPSASRGP
GGRQEAQRERGEGEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ
SRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGK

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_1|522_bp
atggccgatccgggtccggccgggcctccccggagcccgggcccgcgccccctgcgccct
ggcgcccggcgctcacgcgggccctttgtgtctctcctcctcccgcagcaagatgttcat
cgggggactcagttggcagactacgcaggcccagctcggccctcggcttcccggggcccc
ggtgggcgccaggaggctcagcgggaacggggcgagggcgaagggctgcgcgaatacttc
ggccagttcggggaggtgaaggagtgtctggtgatgcgggaccccctgaccaagagatcc
aggggtttcggcttcgtcactttcatggaccaggcgggggtggataaagtgctggcgcaa
tcgcggcacgagctcgactccaaaacaattgaccctaaggtggccttccctcggcgagca
cagcccaagatggtgactcgaacgaagaagatctttgtgggggggctgtcggtgaacacc
acggtggaggacgtgaagcaatattttgagcagtttgggaag

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_2|64_aa
MGRARWLTPVIPALLEAEVPIMHPLSACSLCHPVNALVRSRDADWLRAGPWAQRCVSIIV
RDCE

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_2|195_bp
atgggccgggcacggtggctcacacctgtaatcccagcacttttggaggctgaggtcccc
atcatgcacccgctcagtgcttgttctctctgccatcctgtcaatgcccttgtgagatca
cgtgatgccgactggctccgagctgggccctgggctcagcgctgtgtgagcatcattgta
cgggactgtgaatag

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_3|109_aa
MAVVGVSSVSRLLGRSRPQLGRPMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLK
SHHGEHERPEFIAYPHLRIRTKKLAFELQVSVQVEKKLALVISVSTVKV

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_3|330_bp
atggcggtagttggtgtgtcctcggtttctcggctgctgggtcggtcccgcccacagctg
gggcggcctatgtcgagtggcgcccatggcgaagagggctcagctcgcatgtggaagact
ctcaccttcttcgtcgcgctccccggggtggcagtcagcatgctgaatgtgtacctgaag
tcgcaccacggagagcacgagagacccgagttcatcgcctacccccatctccgcatcagg
accaagaaattagcatttgagcttcaagtcagtgtccaagttgaaaagaaattggcatta
gttatttctgtttccacagtgaaggtctag

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_4|76_aa
MNSVGEACTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEIPIE
GLEFMGHGKEKPENSS

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_4|231_bp
atgaacagtgtgggggaggcatgcacggacatgaagcgcgagtacgaccagtgcttcaat
cgctggttcgccgagaaatttctcaagggggacagctccggggacccgtgcaccgacctc
ttcaagcgctaccagcagtgtgttcagaaagcaataaaggagaaagagattcctattgaa
ggactggagttcatgggccatggcaaagaaaagcctgaaaattcttcttga

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_5|121_aa
MWSRLVWLGLRAPLGGRQGFTSKADPQGSGRITAAVIEHLERLALVDFGSREAVARLEKA
IAFADRLRAVDTDGVEPMESVLEDRCLYLRSDNVVEGNCADELLQNSHRVVEEYFVAPPG
R

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_5|366_bp
atgtggtcgcggttggtgtggctgggccttcgggcccctctgggcgggcgccagggcttc
acctccaaggcggatcctcagggcagtggccggatcacggctgcggtgatcgagcacctg
gagcgtctagcgcttgtggacttcggcagccgcgaggcagtggcgcgactggagaaagct
atcgccttcgccgaccggctacgcgccgtggacacagacggggtggagcccatggaatcg
gtcctggaggacagatgtctatacctgagatccgacaatgtggtagaaggcaactgtgct
gatgaattactacaaaactcccatcgcgtcgtggaggagtactttgtggcccccccaggt
aggtga

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_6|193_aa
MSGWADERGGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFE
DPRDAEDAIYGRNGYDYGQCRLRVEFPRTYGGRGSWQDLKDHMREAGDVCYADVQKDGVG
MVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYPERSTSYGYSRSRSGSRGRDSPYQS
RGSPHYFSPFRPY

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_6|582_bp
atgtcgggctgggcggacgagcgcggcggcgagggcgacgggcgcatctacgtggggaac
cttccgaccgacgtgcgcgagaaggacttggaggacctgttctacaagtacggccgcatc
cgcgagatcgagctcaagaaccggcacggcctcgtgcccttcgccttcgtgcgcttcgag
gacccccgagatgcagaggatgctatttatggaagaaatggttatgattatggccagtgt
cggcttcgtgtggagttccccaggacttatggaggtcggggcagctggcaggacctgaag
gatcacatgcgagaagctggggatgtctgttatgctgatgtgcagaaggatggagtgggg
atggtcgagtatctcagaaaagaagacatggaatatgccctgcgtaaactggatgacacc
aaattccgctctcatgagggtgaaacttcctacatccgagtttatcctgagagaagcacc
agctatggctactcacggtctcggtctgggtcaaggggccgtgactctccataccaaagc
aggggttccccacactacttctctcctttcaggccctactga

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_7|89_aa
MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGR
NFGSYVTHETKHFIYFYLGQVAILLFKSG

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_7|270_bp
atgtgcgaccgaaaggccgtgatcaaaaatgcggacatgtcggaagagatgcaacaggac
tcggtggagtgcgctactcaggcgctggagaaatacaacatagagaaggacattgcggct
catatcaagaaggaatttgacaagaagtacaatcccacctggcattgcatcgtggggagg
aacttcggtagttatgtgacacatgaaaccaaacacttcatctacttctacctgggccaa
gtggccattcttctgttcaaatctggttaa

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_8|382_aa
MRFAKKHNKKGLKKMQANSARATSARADAIKALVKPKEVKPEIPKGVSRKLDPLAYIAHP
QAWEMCSFLHCQGAQAMSVKGQGQRSNQGPGCSSSLGSQRCPDTYEGFRVDISVCQCEDR
RTVYQVFESVAKKYDVMNDMMSLGIHRVWKDLLLWKMHPLPGTQLLDVAGGTGDIAFRFL
NYVQSQHQRKQKRQLRAQQNLSWEEIAKEYQNEEDSLGGSRVVVCDINKEMLKVGKQKAL
AQGYRAGLAWVLGDAEELPFDDDKFDIYTIAFGIRNVTHIDQALQEAHRVLKPGGRFLCL
EFSQVNNPLISRLYDLYSFQVIPVLGEVIAGDWKSYQYLVESIRRFPSQEEFKDMIEDAG
FHKVTYESLTSGIVAIHSGFKL

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_8|1149_bp
atgcgctttgccaagaagcacaacaagaaaggcctaaaaaagatgcaggccaacagtgcc
agggccacgagtgcacgtgctgacgctatcaaggcccttgtaaagcccaaggaggttaag
cccgagatcccaaagggtgtcagccgcaagctcgatccacttgcctacattgcccacccc
caggcttgggaaatgtgctcattcctgcattgccaaggggctcaagctatgtcggtcaaa
ggccaaggccaaagatcaaaccaaggcccaggctgcagctccagcttaggctcccaaagg
tgcccggacacctacgaaggcttcagagtagatatctctgtctgccaatgtgaggacaga
aggactgtctatcaggtgtttgaaagtgtggctaagaagtatgatgtgatgaatgatatg
atgagtcttggtatccatcgtgtttggaaggatttgctgctctggaagatgcacccgctt
cctgggacccagctgcttgatgttgctggaggcacaggtgacattgcattccggttcctt
aattatgttcagtcccagcatcagagaaaacagaagaggcagttaagggcccaacaaaat
ttatcctgggaagaaattgccaaagagtaccagaatgaagaagattccttgggcgggtct
cgtgtcgtggtgtgtgacatcaacaaggagatgctaaaggttggaaagcagaaagccttg
gctcaaggatacagagctggacttgcatgggtattaggagatgctgaagaactgcccttt
gatgatgacaagtttgatatttacaccattgcctttgggatccggaatgtcacacacatt
gatcaggcactccaggaagctcatcgggtgctgaaaccaggaggacggtttctctgtctg
gaatttagccaagtgaacaatcccctcatatccaggctttatgatctatatagcttccag
gtcatccctgtcctgggagaggtcatcgctggagactggaagtcctatcagtaccttgta
gagagtatccgaaggtttccgtctcaggaagagttcaaggacatgatagaagatgcaggc
tttcacaaggtgacttacgaaagtctaacatcaggcattgtggccattcattctggcttc
aaactttaa

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_9|237_aa
MKMLIMLEVKFKLSVSGVIGEIDDCGNIDTAATGETLDIQPEELQEDELTNMNKKWSCDK
KVEDVPEEVMPAKTFTLKEFLEVFHNIESTKDKISEVDKNLERNMAICQGIEKIFHTTRS
PSGFFEMLFGDSSPFPEQFEKPRKETGKNVAMKAENRCRRRPPPALNAMSLGPRRARSAP
TAVAAEAPVDAAELPQRRRHRLRHGQEQRLQQLLRLFGQQQRATAAPLRLGGASRRV

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_9|714_bp
atgaaaatgctgataatgctggaagtgaaattcaaattgagtgtcagtggagttatagga
gaaatagatgactgtgggaatattgacactgctgccactggagagactctagacatacag
ccagaggaactgcaggaagatgaacttaccaacatgaacaagaaatggagctgtgacaaa
aaggttgaagatgtcccagaagaagtgatgccagcaaaaactttcacattaaaggagttc
ttggaggtatttcataacattgaaagcacaaaggataaaatatcagaagtagataaaaac
ttagaaagaaatatggcaatttgccaaggcatagaaaagatatttcatacgacaagaagt
ccatccgggttctttgagatgctgtttggcgactcgtcgccattcccggagcagtttgag
aagccaaggaaggaaacagggaaaaatgtcgccatgaaggccgagaaccgctgccgccgc
cgacccccgccggccctgaacgccatgagcctgggtccccgccgcgcccgctccgctccg
actgccgtcgccgccgaggcccccgttgatgccgctgagctcccccaacgccgccgccac
cgcctccgacatggacaagaacagcggctccaacagctcctccgcctcttcgggcagcag
caaagggcaacagccgccccgctccgcctcggcggggccagccggcgagtctaa

>gi568815586r:120362022_120569609|GENSCAN_predicted_peptide_10|604_aa
MLGMVAHACNPSTLGGRDGKNSSGSKRYNRKRELSYPKNESFNNQSRRSSSQKSKTFNKM
PPQRGGGSSKLFSSSFNGGRRDEVAEAQRAEFSPAQFSGPKKINLNHLLNFTFEPRGQTG
HFEGSGHGSWGKRNKWGHKPFNKELFLQANCQFVVSEDQDYTAHFADPDTLVNWDFVEQV
RICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDL
KSVVATESHQYVVGDTITMQLMKREKGVLVALPKSKWMNVDHPIHLGDEQHSQYSKLLLA
SKEQVLHRVVLEEKVALEQQLAEEKHTPESCFIEAAIQELKGVLEYLSAFDEETTEVCSL
DTPSRPLALPLVEEEEAVSEPEPEGLPEACDDLELADDNLKEGTICTESSQQEPITKSGF
TRLSSSPCYYFYQAEDGQHMFLHPVNVRCLVREYGSLERSPEKISATVVEIAGYSMSEDV
RQRHRYLSHLPLTCEFSICELALQPPVVSKETLEMFSDDIEKRKRQRQKKAREERRRERR
IEIEENKKQGKYPEVHIPLENLQQFPAFNSYTCSSDSALGPTSTEGHGALSISPLSRSPG
SHAX

>gi568815586r:120362022_120569609|GENSCAN_predicted_CDS_10|1812_bp
atgctgggcatggtggctcatgcctgtaatcccagtactttgggaggccgagatggaaag
aactccagtggatccaagcgttataatcgcaaacgtgaactttcctaccccaaaaatgaa
agttttaacaaccagtcccgtcgctccagttcacagaaaagcaagacttttaacaagatg
cctcctcaaaggggcggcggcagcagcaaactctttagctcttcttttaatggtggaaga
cgagatgaggtagcagaggctcaacgggcagagtttagccctgcccagttctctggtcct
aagaagatcaacctgaaccacttgttgaatttcacttttgaaccccgtggccagacgggt
cactttgaaggcagtggacatggtagctggggaaagaggaacaagtggggacataagcct
tttaacaaggaactctttttacaggccaactgccaatttgtggtgtctgaagaccaagac
tacacagctcattttgctgatcctgatacattagttaactgggactttgtggaacaagtg
cgcatttgtagccatgaagtgccatcttgcccaatatgcctctatccacctactgcagcc
aagataacccgttgtggacacatcttctgctgggcatgcatcctgcactatctttcactg
agtgagaagacgtggagtaaatgtcccatctgttacagttctgtgcataagaaggatctc
aagagtgttgttgccacagagtcacatcagtatgttgttggtgataccattacgatgcag
ctgatgaagagggagaaaggggtgttggtggctttgcccaaatccaaatggatgaatgta
gaccatcccattcatctaggagatgaacagcacagccagtactccaagttgctgctggcc
tctaaggagcaggtgctgcaccgggtagttctggaggagaaagtagcactagagcagcag
ctggcagaggagaagcacactcccgagtcctgctttattgaggcagctatccaggagctc
aagggtgtgctggagtatctgtctgccttcgatgaagaaaccacggaagtttgttctctg
gacactccttctagacctcttgctctccctctggtagaagaggaggaagcagtgtctgaa
ccagagcctgaggggttgccagaggcctgtgatgacttggagttagcagatgacaatctt
aaagaggggaccatttgcactgagtccagccagcaggaacccatcaccaagtcaggcttc
acacgcctcagcagctctccttgttactacttttaccaagcggaagatggacagcatatg
ttcctgcaccctgtgaatgtgcgctgcctcgtgcgggagtacggcagcctggagaggagc
cccgagaagatctcagcaactgtggtggagattgctggctactccatgtctgaggatgtt
cgacagcgtcacagatatctctctcacttgccactcacctgtgagttcagcatctgtgaa
ctggctttgcaacctcctgtggtctctaaggaaaccctagagatgttctcagatgacatt
gagaagaggaaacgtcagcgccaaaagaaggctcgggaggaacgccgccgagagcgcagg
attgagatagaggagaacaagaaacagggcaagtacccagaagtccacattcccctcgag
aatctacagcagtttcctgccttcaattcttatacctgctcctctgattctgctttgggt
cccaccagcaccgagggccatggggccctctccatttctcctctcagcagaagtccaggt
tcccatgcagnn