Result of FASTA (ccds) for pF1KE0610
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0610, 363 aa
  1>>>pF1KE0610 363 - 363 aa - 363 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.3683+/-0.000845; mu= 11.6348+/- 0.051
 mean_var=86.6999+/-17.208, 0's: 0 Z-trim(108.2): 31  B-trim: 56 in 1/52
 Lambda= 0.137742
 statistics sampled from 10069 (10090) to 10069 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.31), width:  16
 Scan time:  2.770

The best scores are:                                      opt bits E(32554)
CCDS7583.1 PLEKHS1 gene_id:79949|Hs108|chr10       ( 363) 2396 485.9 2.3e-137
CCDS53580.1 PLEKHS1 gene_id:79949|Hs108|chr10      ( 465) 2049 417.0 1.6e-116
CCDS53581.1 PLEKHS1 gene_id:79949|Hs108|chr10      ( 366) 1524 312.6 3.4e-85


>>CCDS7583.1 PLEKHS1 gene_id:79949|Hs108|chr10            (363 aa)
 initn: 2396 init1: 2396 opt: 2396  Z-score: 2579.5  bits: 485.9 E(32554): 2.3e-137
Smith-Waterman score: 2396; 100.0% identity (100.0% similar) in 363 aa overlap (1-363:1-363)

               10        20        30        40        50        60
pF1KE0 MEPKPQKSPGKQFTFSYENEVCKQDYFIKSPPSQLFSSVTSWKKRFFILSKAGEKSFSLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MEPKPQKSPGKQFTFSYENEVCKQDYFIKSPPSQLFSSVTSWKKRFFILSKAGEKSFSLS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 YYKDHHHRGSIEIDQNSSVEVGISSQEKMQSVQKMFKCHPDEVMSIRTTNREYFLIGHDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YYKDHHHRGSIEIDQNSSVEVGISSQEKMQSVQKMFKCHPDEVMSIRTTNREYFLIGHDR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 EKIKDWVSFMSSFRQDIKATQQNTEEELSLGNKRTLFYSSPLLGPSSTSEAVGSSSPRNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 EKIKDWVSFMSSFRQDIKATQQNTEEELSLGNKRTLFYSSPLLGPSSTSEAVGSSSPRNG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 LQDKHLMEQSSPGFRQTHLQDLSEATQDVKEENHYLTPRSVLLELDNIIASSDSGESIET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LQDKHLMEQSSPGFRQTHLQDLSEATQDVKEENHYLTPRSVLLELDNIIASSDSGESIET
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 DGPDQVSGRIECHYEPMESYFFKETSHESVDSSKEEPQTLPETQDGDLHLQEQGSGIDWC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 DGPDQVSGRIECHYEPMESYFFKETSHESVDSSKEEPQTLPETQDGDLHLQEQGSGIDWC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 LSPADVEAQTTNDQKGSASLTVVQLSILINNIPDESQVEKLNVFLSPPDVINYLALTEAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LSPADVEAQTTNDQKGSASLTVVQLSILINNIPDESQVEKLNVFLSPPDVINYLALTEAT
              310       320       330       340       350       360

          
pF1KE0 GRI
       :::
CCDS75 GRI
          

>>CCDS53580.1 PLEKHS1 gene_id:79949|Hs108|chr10           (465 aa)
 initn: 2071 init1: 2047 opt: 2049  Z-score: 2205.2  bits: 417.0 E(32554): 1.6e-116
Smith-Waterman score: 2217; 96.0% identity (96.0% similar) in 354 aa overlap (10-363:4-343)

               10        20        30        40        50        60
pF1KE0 MEPKPQKSPGKQFTFSYENEVCKQDYFIKSPPSQLFSSVTSWKKRFFILSKAGEKSFSLS
                :::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53       MAGGKQFTFSYENEVCKQDYFIKSPPSQLFSSVTSWKKRFFILSKAGEKSFSLS
                     10        20        30        40        50    

               70        80        90       100       110       120
pF1KE0 YYKDHHHRGSIEIDQNSSVEVGISSQEKMQSVQKMFKCHPDEVMSIRTTNREYFLIGHDR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 YYKDHHHRGSIEIDQNSSVEVGISSQEKMQSVQKMFKCHPDEVMSIRTTNREYFLIGHDR
           60        70        80        90       100       110    

              130       140       150       160       170       180
pF1KE0 EKIKDWVSFMSSFRQDIKATQQNTEEELSLGNKRTLFYSSPLLGPSSTSEAVGSSSPRNG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 EKIKDWVSFMSSFRQDIKATQQNTEEELSLGNKRTLFYSSPLLGPSSTSEAVGSSSPRNG
          120       130       140       150       160       170    

              190       200       210       220       230       240
pF1KE0 LQDKHLMEQSSPGFRQTHLQDLSEATQDVKEENHYLTPRSVLLELDNIIASSDSGESIET
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 LQDKHLMEQSSPGFRQTHLQDLSEATQDVKEENHYLTPRSVLLELDNIIASSDSGESIET
          180       190       200       210       220       230    

              250       260       270       280       290       300
pF1KE0 DGPDQVSGRIECHYEPMESYFFKETSHESVDSSKEEPQTLPETQDGDLHLQEQGSGIDWC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DGPDQVSGRIECHYEPMESYFFKETSHESVDSSKEEPQTLPETQDGDLHLQEQGSGIDWC
          240       250       260       270       280       290    

              310       320       330       340       350       360
pF1KE0 LSPADVEAQTTNDQKGSASLTVVQLSILINNIPDESQVEKLNVFLSPPDVINYLALTEAT
       ::::::::::::::::              ::::::::::::::::::::::::::::::
CCDS53 LSPADVEAQTTNDQKG--------------NIPDESQVEKLNVFLSPPDVINYLALTEAT
          300       310                     320       330       340

                                                                   
pF1KE0 GRI                                                         
       :::                                                         
CCDS53 GRICVSQWEGPPRLGCIFCHGDHLLAVNDLKPQSLEEVSLFLTRSIQKEDSFRILSYQVA
              350       360       370       380       390       400

>>CCDS53581.1 PLEKHS1 gene_id:79949|Hs108|chr10           (366 aa)
 initn: 1546 init1: 1522 opt: 1524  Z-score: 1643.0  bits: 312.6 E(32554): 3.4e-85
Smith-Waterman score: 1692; 94.9% identity (94.9% similar) in 275 aa overlap (89-363:1-261)

       60        70        80        90       100       110        
pF1KE0 LSYYKDHHHRGSIEIDQNSSVEVGISSQEKMQSVQKMFKCHPDEVMSIRTTNREYFLIGH
                                     ::::::::::::::::::::::::::::::
CCDS53                               MQSVQKMFKCHPDEVMSIRTTNREYFLIGH
                                             10        20        30

      120       130       140       150       160       170        
pF1KE0 DREKIKDWVSFMSSFRQDIKATQQNTEEELSLGNKRTLFYSSPLLGPSSTSEAVGSSSPR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 DREKIKDWVSFMSSFRQDIKATQQNTEEELSLGNKRTLFYSSPLLGPSSTSEAVGSSSPR
               40        50        60        70        80        90

      180       190       200       210       220       230        
pF1KE0 NGLQDKHLMEQSSPGFRQTHLQDLSEATQDVKEENHYLTPRSVLLELDNIIASSDSGESI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 NGLQDKHLMEQSSPGFRQTHLQDLSEATQDVKEENHYLTPRSVLLELDNIIASSDSGESI
              100       110       120       130       140       150

      240       250       260       270       280       290        
pF1KE0 ETDGPDQVSGRIECHYEPMESYFFKETSHESVDSSKEEPQTLPETQDGDLHLQEQGSGID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS53 ETDGPDQVSGRIECHYEPMESYFFKETSHESVDSSKEEPQTLPETQDGDLHLQEQGSGID
              160       170       180       190       200       210

      300       310       320       330       340       350        
pF1KE0 WCLSPADVEAQTTNDQKGSASLTVVQLSILINNIPDESQVEKLNVFLSPPDVINYLALTE
       ::::::::::::::::::              ::::::::::::::::::::::::::::
CCDS53 WCLSPADVEAQTTNDQKG--------------NIPDESQVEKLNVFLSPPDVINYLALTE
              220                     230       240       250      

      360                                                          
pF1KE0 ATGRI                                                       
       :::::                                                       
CCDS53 ATGRICVSQWEGPPRLGCIFCHGDHLLAVNDLKPQSLEEVSLFLTRSIQKEKLKLTIGRI
        260       270       280       290       300       310      




363 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 20:27:48 2016 done: Wed Nov  2 20:27:48 2016
 Total Scan time:  2.770 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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