GENSCAN 1.0	Date run:  2-Nov-116	Time: 20:55:59

Sequence gi568815595f:127952835_128169659 : 216825 bp : 44.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10355  10552  198  0  0  107   80   157 0.991  16.12
 1.02 Term +  21526  21680  155  2  2  105   48   119 0.978   7.68
 1.03 PlyA +  22141  22146    6                               1.05

 2.00 Prom +  26526  26565   40                              -4.86
 2.01 Init +  27219  27274   56  2  2   64   75    52 0.614   2.26
 2.02 Intr +  29250  29275   26  0  2  126   16     0 0.237  -5.73
 2.03 Term +  31263  31444  182  1  2   99   45   218 0.994  16.37
 2.04 PlyA +  32455  32460    6                               1.05

 3.12 PlyA -  33657  33652    6                              -0.45
 3.11 Term -  35561  35374  188  0  2   59   53    74 0.797  -1.35
 3.10 Intr -  36103  36023   81  2  0   79  100    44 0.922   4.31
 3.09 Intr -  37192  37100   93  2  0   44  111    60 0.902   3.84
 3.08 Intr -  39019  38849  171  2  0   87   58    66 0.897   3.41
 3.07 Intr -  40155  40079   77  2  2   38  105    67 0.963   2.56
 3.06 Intr -  41946  41749  198  2  0   81  105    15 0.475   0.97
 3.05 Intr -  45380  45279  102  1  0  126   32    81 0.707   5.59
 3.04 Intr -  51695  51622   74  2  2   35   96    55 0.216  -0.80
 3.03 Intr -  70194  70078  117  0  0   87   62    49 0.256   2.86
 3.02 Intr -  80968  80792  177  1  0   79   42   123 0.217   6.92
 3.01 Init -  83136  83107   30  0  0   62   80    34 0.478  -0.21
 3.00 Prom -  92692  92653   40                              -2.66

 4.00 Prom +  96241  96280   40                              -4.06
 4.01 Init +  98509  98512    4  0  1   62   72     0 0.216  -4.04
 4.02 Intr +  98872  99076  205  2  1   95  111    78 0.351   9.06
 4.03 Intr +  99927 100068  142  0  1   83  115    46 0.397   7.16
 4.04 Intr + 102682 102747   66  0  0   98  115    23 0.938   5.10
 4.05 Intr + 102839 102917   79  1  1   99   75     2 0.965  -0.88
 4.06 Intr + 103875 104006  132  1  0   79   47   105 0.955   6.12
 4.07 Intr + 107268 107377  110  1  2   58   91   113 0.984   8.60
 4.08 Intr + 107674 107827  154  0  1   57   94   121 0.989   9.25
 4.09 Intr + 112043 112203  161  0  2   99   89   249 0.999  25.81
 4.10 Intr + 114120 114317  198  2  0   60  123   345 0.995  34.75
 4.11 Intr + 114587 114824  238  1  1   95   35    87 0.388   1.29
 4.12 Intr + 115111 115225  115  2  1   83  117   157 0.714  17.61
 4.13 Term + 116642 116828  187  2  1   97   52   257 0.902  19.96
 4.14 PlyA + 118825 118830    6                               1.05

 5.18 PlyA - 118887 118882    6                               1.05
 5.17 Term - 124355 124090  266  0  2   71   38   197 0.680   8.67
 5.16 Intr - 126295 126198   98  0  2   49   94    70 0.375   3.35
 5.15 Intr - 128575 128420  156  0  0  115   44   264 0.446  23.83
 5.14 Intr - 129740 129649   92  2  2   67   83   124 0.996   8.59
 5.13 Intr - 134974 134872  103  0  1   63   99   123 0.856  11.08
 5.12 Intr - 144664 144466  199  2  1   90   91   368 0.998  35.71
 5.11 Intr - 146111 146048   64  2  1   80   91    60 0.942   3.79
 5.10 Intr - 147910 147761  150  1  0   96   84   112 0.993  11.96
 5.09 Intr - 148814 148725   90  2  0   91   90    71 0.995   7.79
 5.08 Intr - 152090 151939  152  0  2   97   87    97 0.718  10.38
 5.07 Intr - 160186 160054  133  1  1   93  111   105 0.990  13.52
 5.06 Intr - 161919 161722  198  0  0   97   42    65 0.763   2.35
 5.05 Intr - 170907 170576  332  1  2   52   68   272 0.252  16.95
 5.04 Intr - 171200 171057  144  0  0   35   52   115 0.238   2.85
 5.03 Intr - 180012 179802  211  0  1   85   61    34 0.019  -1.11
 5.02 Intr - 192174 192044  131  1  2   74   64    53 0.322   1.91
 5.01 Init - 197294 197141  154  2  1   49   59    99 0.389   3.25
 5.00 Prom - 197748 197709   40                              -6.66

 6.00 Prom + 198444 198483   40                              -4.16
 6.01 Init + 200674 200989  316  0  1   92   89   616 0.166  59.60
 6.02 Intr + 202800 202906  107  1  2  101   89   -20 0.102  -0.67
 6.03 Term + 205647 205751  105  2  0   44   49   110 0.445   1.11
 6.04 PlyA + 216245 216250    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 200674 201162  489  0  0   92   53   643 0.824  57.26


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:127952835_128169659|GENSCAN_predicted_peptide_1|117_aa
XGIGCVGQDKGQVRKCLDVVEIYNPDGDFWREGPPMPSPLLSLRTNSTNAGAVDGKLYVC
GGFHGAGASMIRKEGSTAISFILYRHSSLRALLSLDARAADCEQVSVWAIMKGMSFN

>gi568815595f:127952835_128169659|GENSCAN_predicted_CDS_1|354_bp
ngtggcattggctgtgtaggtcaagacaagggccaggttcgaaaatgccttgacgtggtg
gagatctacaacccagatggggacttttggcgagagggccctcccatgccaagtcccctc
ctctcactccgcaccaattccaccaatgcaggggcagtggatgggaaactctatgtctgc
gggggattccatggagcaggggcctccatgatacggaaagagggctccacagccatcagt
ttcatcctgtaccgtcactccagcctgagggcattgctctccctagatgccagagcagca
gattgtgaacaggtttctgtatgggccatcatgaagggaatgtccttcaactga

>gi568815595f:127952835_128169659|GENSCAN_predicted_peptide_2|87_aa
MEKFELHQKSSKKRYSEEMLASIDSIKDRHEVISKEILELDPWENQWNVVAINVLMHDSY
DVCLVARMNPRDLIPPPSDLVEEGNEH

>gi568815595f:127952835_128169659|GENSCAN_predicted_CDS_2|264_bp
atggagaaatttgaactgcaccagaaatcttctaaaaagaggtactcagaagaaatgctg
gcctctatagacagcattaaagatcgccatgaggttatctccaaagaaatattggaactg
gacccatgggaaaaccagtggaatgttgtagccatcaacgtcctcatgcatgacagctat
gatgtctgcctagtagccaggatgaatccccgagacctcatccccccgccttcagatttg
gtggaagaaggcaatgagcactaa

>gi568815595f:127952835_128169659|GENSCAN_predicted_peptide_3|435_aa
MPPGKGFLRWEFSSGGQNQITNMNSGTISEPIQGLNKLAIKSCITGLKIEDQVENQRKRK
DIRKLMTFKCWDYRHEHLAPVSDLTCKDFKAAIVNMVKELKDTMKQRKDPLSPHNNTRRQ
LYVTDEEVEAQRGSSVAGEQKLTCTDVSVASITSIDSVECKHSKPMGELVSLGLPKTVLV
GSTVSWSMSSFSLVYYLILLEHILKEPLKNAWMVDVAVLKHGCTFIASSVIERAFTSSGS
SEISHKEPPVGYCTLVVRVGLVPSATDTAQPTTAQLQSLNASFSAWSVALGILHPAPHIL
PITSYVLHHPQDILGLSPSASKWLEATEHNGSLPGLSLVLLSTHRKRRWLQFQGAGRLAK
QKIAHLFLNITFKANTDILYPRLHPTHTVVLIPLLRFAQAPPNLAPNMRLAGLPGCSTLL
SGSGLWMMFLEDFLA

>gi568815595f:127952835_128169659|GENSCAN_predicted_CDS_3|1308_bp
atgcccccgggcaaaggctttttgcgctgggagttcagctcaggtgggcaaaaccagata
actaacatgaacagtggaacaatcagtgaaccaatacaagggttaaataagctagcaatt
aaaagctgtatcactggtctaaagatagaagatcaagtagaaaatcagcgcaagaggaaa
gatatacgaaaactaatgaccttcaagtgctgggattacaggcatgagcacctggcccca
gtgtcagatttaacttgcaaagatttcaaagcagccattgtaaatatggtcaaagaacta
aaggacaccatgaagcaaaggaaggaccctttgagtcctcacaacaacactagaaggcag
ctctatgtcacagatgaggaagttgaggcacagagaggatcctcagtggctggtgagcag
aagctgacatgcacggatgtgtcggttgcctctattacgagtattgactcagttgagtgc
aaacacagcaagcccatgggtgagttggtcagcctgggacttcccaagactgtcctagta
ggatccactgtttcctggtccatgtcttccttttccttggtttactaccttattctgctt
gagcacatcctcaaggagcctcttaagaatgcatggatggtagatgtggcagttttgaaa
catggctgcacatttattgcctcttctgtcattgagagggctttcacttcatctggaagt
tctgaaatttcccataaggagcctcctgtgggctactgcacacttgttgtgagagtgggc
ctcgtcccaagtgcaactgacacagctcagcccacgacagcacagttgcagagcctgaac
gccagcttctcagcctggagcgtggccttgggcatcctccaccctgctcctcacatcctg
cctataacatcctacgttttgcaccatcctcaagatatcttgggattaagcccaagtgcc
tccaagtggcttgaagccactgagcacaacgggagcctcccaggattgtctctggtgctc
ctgagcacccacagaaaacggcggtggctgcagttccagggggcaggccgacttgctaag
cagaaaatagcccatctcttcctcaacatcacttttaaagcaaacacagacattctctat
cctcggctgcacccaacccacactgttgttctgatcccactgctcaggttcgcccaggct
ccccccaacttggcccccaacatgcgtcttgctggactgccaggctgctccaccctgctt
agtggctctgggctgtggatgatgttcttagaggacttccttgcctga

>gi568815595f:127952835_128169659|GENSCAN_predicted_peptide_4|596_aa
MESIKARHKGTLPGGLPEFFCEADYFPSCPGPSPAKSLQKLIPFVLRWKGTHTHDKPPGL
LNDSDSEGARRRPWVARKVTSLCPNSSCFVSPIKVKFLEVIKPFCVILPEIQKPERKIQF
KEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSG
LIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGIC
LLITIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGME
FEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIK
SARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVSLLGTWSDTS
SGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAK
DVSRSKTFWKGDESVTASNSNFSPVGTLQVAKQLKEQQMVMRGHRETSMVHELNRYIPTA
AAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEVGSMGALLF

>gi568815595f:127952835_128169659|GENSCAN_predicted_CDS_4|1791_bp
atggaatctatcaaggctcggcacaaaggtactctcccaggaggccttcctgaattcttc
tgtgaggcagactacttcccgagctgccccggcccttctccggccaagtctctccagaaa
ctcatcccattcgttctcagatggaaggggacccacacccacgacaagcctccgggtttg
cttaatgactcagacagcgagggtgctcgaaggcgtccctgggtagcgcggaaggttact
tctctgtgtcccaactcttcctgttttgtttctcccatcaaagtcaaatttctggaagtc
atcaagcccttctgtgtcatcctgccggaaattcagaagccagagaggaagattcagttt
aaggagaaagtgctgtggaccgctatcaccctctttatcttcttagtgtgctgccagatt
cccctgtttgggatcatgtcttcagattcagctgaccctttctattggatgagagtgatt
ctagcctctaacagaggcacattgatggagctagggatctctcctattgtcacgtctggc
cttataatgcaactcttggctggcgccaagataattgaagttggtgacaccccaaaagac
cgagctctcttcaacggagcccaaaagttatttggcatgatcattactatcggccagtct
atcgtgtatgtgatgaccgggatgtatggggacccttctgaaatgggtgctggaatttgc
ctgctaatcaccattcagctctttgttgctggcttaattgtcctacttttggatgaactc
ctgcaaaaaggatatggccttggctctggtatttctctcttcattgcaactaacatctgt
gaaaccatcgtatggaaggcattcagccccactactgtcaacactggccgaggaatggaa
tttgaaggtgctatcatcgcacttttccatctgctggccacacgcacagacaaggtccga
gcccttcgggaggcgttctaccgccagaatcttcccaacctcatgaatctcatcgccacc
atctttgtctttgcagtggtcatctatttccagggcttccgagtggacctgccaatcaag
tcggcccgctaccgtggccagtacaacacctatcccatcaagctcttctatacgtccaac
atccccatcatcctgcagtctgccctggtgtccaacctttatgtcatctcccaaatgctc
tcagctcgcttcagtggcaacttgctggtcagcctgctgggcacctggtcggacacgtct
tctgggggcccagcacgtgcttatccagttggtggcctttgctattacctgtcccctcca
gaatcttttggctccgtgttagaagacccggtccatgcagttgtatacatagtgttcatg
ctgggctcctgtgcattcttctccaaaacgtggattgaggtctcaggttcctctgccaaa
gatgtaagtagaagcaaaactttctggaagggtgatgaaagtgtgactgcctccaattcc
aacttctcccctgtgggcaccctgcaggttgcaaagcagctgaaggagcagcagatggtg
atgagaggccaccgagagacctccatggtccatgaactcaaccggtacatccccacagcc
gcggcctttggtgggctgtgcatcggggccctctcggtcctggctgacttcctaggcgcc
attgggtctggaaccgggatcctgctcgcagtcacaatcatctaccagtactttgagatc
ttcgttaaggagcaaagcgaggttggcagcatgggggccctgctcttctga

>gi568815595f:127952835_128169659|GENSCAN_predicted_peptide_5|890_aa
MLIKGEAFELTKMQEKGQAAQNRGKLMKERAAQRKQQAQRQQQPKPCGTWRDRLPPHNDK
VAVSSSTKSPNQVSLALMKSCAPAPREKSSALPSQKGFLSVAITTGNVLVHLKPAWHWVS
PKARGKYCLATTDVYSRPMHSTQQMMNPAKSGFSSFKTLHSLLSQALDQIRGVVPLCSRP
QPRQEAPATGEANPETQTEVGDRSSSSSRDGRSPPGVCKMKIEEVKSTTKTQRIASHSHV
KGLGLDESGLAKQAASGLVGQENAREVWPVDQGVGGCKQGCCGERAAEVGGSGRDARARG
LPPLFPQGSENGPGARGGAPPWSWRFFSFALRRIPVFKVSALSSQVQMPNEAGNGDEGSG
WVHCGVSALSPRCSALLKVTMRLQAKQNQATALALAIAQELGSKVPFCPMVGSEVYSTEI
KKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKG
TKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKG
DVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKY
IDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITS
PHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYS
VQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMKSKMEVALTAD
LTAAGGDRVFFGCPRYQYPDQPGTVINGQAVRAGRPSARVSATDAAVRPARPALTPGQGP
GAINGRRAAGGGWAAAIRWADGRLPIARSVTRRHRHRHAASTQISAVSAA

>gi568815595f:127952835_128169659|GENSCAN_predicted_CDS_5|2673_bp
atgcttattaagggagaggcatttgagctgacaaagatgcaagagaagggccaggctgca
cagaaccgagggaaattgatgaaagaacgtgctgcacagagaaaacagcaggctcagaga
cagcagcaacctaagccatgtggcacgtggcgagacaggctcccccctcacaatgacaaa
gtggctgtcagcagctccacaaagtccccaaaccaagtctccttggccctgatgaagtca
tgtgcccctgcaccaagagagaaatccagtgctctgcctagccagaaagggtttctttct
gtggccatcacaactgggaatgtgctggttcacctgaagccagcatggcactgggtctca
cccaaggctcgtggtaaatactgtctggctaccactgatgtttattcaaggcccatgcac
tctactcagcagatgatgaatcctgccaagtctgggttttcctccttcaagacgctgcat
tctcttttgtcccaggccctagatcaaatccggggcgtggtcccactgtgctcccgaccc
cagcctcggcaggaagcgccggctacgggggaagccaacccggagacacagacggaagtg
ggtgaccggagctctagcagcagccgcgatgggcgcagccctcccggcgtctgcaaaatg
aagattgaggaggtgaagagcactacgaagacgcagcgcatcgcctcccacagccacgtg
aaagggctggggctggacgagagcggcttggccaagcaggcggcctcagggcttgtgggc
caggagaacgcgcgagaggtgtggccagtggaccagggagttgggggctgcaagcagggc
tgctgcggcgagagagctgctgaagtcggtggctcggggcgggatgcgcgcgccaggggt
ctcccgccattatttcctcagggaagtgaaaatgggccaggggctcggggaggggcgccg
ccctggagctggagatttttttcctttgctcttagaagaataccagttttcaaggtgtca
gccttgagctcacaagtgcagatgcctaatgaggcaggcaacggggatgagggaagtggc
tgggtgcactgtggcgtgtctgccttgagccccaggtgctcggccttgctgaaggtcacc
atgagactgcaggccaaacagaaccaggctacagctctggctctggctattgctcaggag
ctgggtagtaaggtccccttctgcccaatggtggggagtgaagtttactcaactgagatc
aagaagacagaggtgctgatggagaacttccgcagggccattgggctgcgaataaaggag
accaaggaagtttatgaaggtgaagtcacagagctaactccgtgtgagacagagaatccc
atgggaggatatggcaaaaccattagccatgtgatcataggactcaaaacagccaaagga
accaaacagttgaaactggaccccagcatttttgaaagtttgcagaaagagcgagtagaa
gctggagatgtgatttacattgaagccaacagtggggccgtgaagaggcagggcaggtgt
gatacctatgccacagaattcgaccttgaagctgaagagtatgtccccttgccaaaaggg
gatgtgcacaaaaagaaagaaatcatccaagatgtgaccttgcatgacttggatgtggct
aatgcgcggccccaggggggacaagatatcctgtccatgatgggccagctaatgaagcca
aagaagacagaaatcacagacaaacttcgaggggagattaataaggtggtgaacaagtac
atcgaccagggcattgctgagctggtcccgggtgtgctgtttgttgatgaggtccacatg
ctggacattgagtgcttcacctacctgcaccgcgccctggagtcttctatcgctcccatc
gtcatctttgcatccaaccgaggcaactgtgtcatcagaggcactgaggacatcacatcc
cctcacggcatccctcttgaccttctggaccgagtgatgataatccggaccatgctgtat
actccacaggaaatgaaacagatcattaaaatccgtgcccagacggaaggaatcaacatc
agtgaggaggcactgaaccacctgggggagattggcaccaagaccacactgaggtactca
gtgcagctgctgaccccggccaacttgcttgctaaaatcaacgggaaggacagcattgag
aaagagcatgtcgaagagatcagtgaacttttctatgatgccaagtcctccgccaaaatc
ctggctgaccagcaggataagtacatgaagagcaagatggaagtggcgctgacagcagat
ctcacagccgcgggtggggacagagtcttcttcggctgcccaaggtaccaatatccagat
cagccaggcacggtgattaatggccaggccgtgcgggctgggcggccatcagcgcgcgtc
tcggcgacggatgcggctgtcaggccggcccggcccgcgctgacccccgggcaggggccc
ggcgcgatcaatgggcggcgcgcagcgggcggcggctgggccgccgcgataagatgggcc
gatgggcgcctgccgattgcccgctccgtcacccgccgtcaccgtcaccgtcacgccgcc
agcacgcagatcagcgccgtcagcgccgcgtga

>gi568815595f:127952835_128169659|GENSCAN_predicted_peptide_6|175_aa
MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRERGITLDLGFSCFSVPL
PARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHASLIRTIIGAIFCMPHMGIYIGQM
IIGLVADGLIGHWAFWVPAIMIATVTPTFINHHPDQSATITIEARPSTSKKIMTC

>gi568815595f:127952835_128169659|GENSCAN_predicted_CDS_6|528_bp
atggcagggcggcgggtgaacgtgaacgtgggcgtgctgggccacatcgacagcggcaag
acggcgctggcgcgggcgctaagcaccacagcctccaccgccgcctttgacaagcagccg
cagagccgcgagcgcggcatcacgctcgatctgggcttctcgtgcttctcggtgccgctg
cccgcgcgcctgcggtcgtctttgcccgagttccaggcagcgcccgaggccgagcccgag
cccggcgagccactgcttcaggtcacgctggtcgactgccccgggcacgcctccctcatc
cggaccatcatcggcgcaatattctgtatgccacacatgggaatatatattgggcagatg
ataattggcttggtggcagatggcctcattggtcactgggcattctgggtcccagctata
atgattgccacagtcaccccaaccttcatcaaccaccaccctgatcagtcggcaaccatc
accattgaggcaagaccctccaccagcaaaaagattatgacttgctga