Result of FASTA (omim) for pF1KE0587
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0587, 278 aa
  1>>>pF1KE0587 278 - 278 aa - 278 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.4059+/-0.000663; mu= 10.8804+/- 0.042
 mean_var=372.0434+/-71.791, 0's: 0 Z-trim(117.4): 300  B-trim: 23 in 1/49
 Lambda= 0.066493
 statistics sampled from 29120 (29432) to 29120 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.569), E-opt: 0.2 (0.345), width:  16
 Scan time:  5.850

The best scores are:                                      opt bits E(85289)
NP_001005922 (OMIM: 148022) keratin-associated pro ( 278) 2415 245.2 9.9e-65
NP_005544 (OMIM: 148021) keratin-associated protei ( 169)  751 85.2 8.8e-17
NP_000418 (OMIM: 152445,604117) loricrin [Homo sap ( 312)  449 56.7 6.2e-08
NP_061978 (OMIM: 600985,606408,615963) tenascin-X  (4242)  400 53.9 5.9e-06
XP_016878162 (OMIM: 612454) PREDICTED: multiple ep (1021)  360 49.1 4.2e-05
XP_016878161 (OMIM: 612454) PREDICTED: multiple ep (1044)  360 49.1 4.2e-05
NP_115821 (OMIM: 612454) multiple epidermal growth (1044)  360 49.1 4.2e-05
XP_016878160 (OMIM: 612454) PREDICTED: multiple ep (1092)  360 49.1 4.3e-05
XP_016878159 (OMIM: 612454) PREDICTED: multiple ep (1097)  360 49.1 4.3e-05
NP_112228 (OMIM: 608820) keratin-associated protei ( 167)  338 45.6 7.3e-05
XP_011507814 (OMIM: 610278) PREDICTED: platelet en ( 868)  322 45.3 0.00048
NP_000217 (OMIM: 144200,607606) keratin, type I cy ( 623)  307 43.6  0.0011
XP_016856727 (OMIM: 610278) PREDICTED: platelet en ( 973)  307 43.9  0.0014
XP_016856728 (OMIM: 610278) PREDICTED: platelet en ( 973)  307 43.9  0.0014
XP_016856726 (OMIM: 610278) PREDICTED: platelet en ( 973)  307 43.9  0.0014
XP_011507813 (OMIM: 610278) PREDICTED: platelet en (1002)  307 44.0  0.0014
NP_001073940 (OMIM: 610278) platelet endothelial a (1037)  307 44.0  0.0014
XP_016856725 (OMIM: 610278) PREDICTED: platelet en (1037)  307 44.0  0.0014
XP_005245198 (OMIM: 610278) PREDICTED: platelet en (1037)  307 44.0  0.0014
XP_011507812 (OMIM: 610278) PREDICTED: platelet en (1037)  307 44.0  0.0014
XP_016856723 (OMIM: 610278) PREDICTED: platelet en (1125)  307 44.0  0.0015
NP_001295050 (OMIM: 612453,614399) multiple epider ( 567)  299 42.8  0.0018
NP_001295048 (OMIM: 612453,614399) multiple epider ( 567)  299 42.8  0.0018
NP_115822 (OMIM: 612453,614399) multiple epidermal (1140)  299 43.3  0.0025
NP_001243474 (OMIM: 612453,614399) multiple epider (1140)  299 43.3  0.0025
XP_011541996 (OMIM: 612453,614399) PREDICTED: mult (1140)  299 43.3  0.0025
XP_016865476 (OMIM: 612453,614399) PREDICTED: mult (1195)  299 43.3  0.0026
XP_016878164 (OMIM: 612454) PREDICTED: multiple ep ( 854)  295 42.7  0.0029
XP_016878163 (OMIM: 612454) PREDICTED: multiple ep ( 854)  295 42.7  0.0029
XP_016884554 (OMIM: 600920,613619) PREDICTED: scav ( 617)  290 42.0  0.0034
XP_016863885 (OMIM: 610083,615145) PREDICTED: tene (2443)  300 43.9  0.0034
XP_016863884 (OMIM: 610083,615145) PREDICTED: tene (2551)  300 44.0  0.0035
XP_016863883 (OMIM: 610083,615145) PREDICTED: tene (2622)  300 44.0  0.0036
XP_016863880 (OMIM: 610083,615145) PREDICTED: tene (2707)  300 44.0  0.0036
XP_016863879 (OMIM: 610083,615145) PREDICTED: tene (2708)  300 44.0  0.0036
XP_016863878 (OMIM: 610083,615145) PREDICTED: tene (2714)  300 44.0  0.0036
XP_016863874 (OMIM: 610083,615145) PREDICTED: tene (2715)  300 44.0  0.0036
XP_016863875 (OMIM: 610083,615145) PREDICTED: tene (2715)  300 44.0  0.0036
XP_016863876 (OMIM: 610083,615145) PREDICTED: tene (2715)  300 44.0  0.0036
XP_016863877 (OMIM: 610083,615145) PREDICTED: tene (2715)  300 44.0  0.0036
XP_006723861 (OMIM: 601033) PREDICTED: laminin sub (2300)  298 43.7  0.0038
NP_878315 (OMIM: 600920,613619) scavenger receptor ( 866)  290 42.2   0.004
NP_699165 (OMIM: 600920,613619) scavenger receptor ( 871)  290 42.2   0.004
XP_011527121 (OMIM: 601033) PREDICTED: laminin sub (3609)  298 44.0  0.0048
XP_011527120 (OMIM: 601033) PREDICTED: laminin sub (3654)  298 44.0  0.0048
NP_005551 (OMIM: 601033) laminin subunit alpha-5 p (3695)  298 44.0  0.0048
XP_006723859 (OMIM: 601033) PREDICTED: laminin sub (3700)  298 44.0  0.0048
NP_114163 (OMIM: 608822) keratin-associated protei ( 174)  268 38.9  0.0079
XP_016884705 (OMIM: 300588) PREDICTED: teneurin-1  (1239)  282 41.7  0.0082
XP_016884704 (OMIM: 300588) PREDICTED: teneurin-1  (1246)  282 41.7  0.0082


>>NP_001005922 (OMIM: 148022) keratin-associated protein  (278 aa)
 initn: 2415 init1: 2415 opt: 2415  Z-score: 1283.1  bits: 245.2 E(85289): 9.9e-65
Smith-Waterman score: 2415; 100.0% identity (100.0% similar) in 278 aa overlap (1-278:1-278)

               10        20        30        40        50        60
pF1KE0 MGCCGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGCCGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 CSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 SGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 GGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCC
              190       200       210       220       230       240

              250       260       270        
pF1KE0 KPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
       ::::::::::::::::::::::::::::::::::::::
NP_001 KPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
              250       260       270        

>>NP_005544 (OMIM: 148021) keratin-associated protein 5-  (169 aa)
 initn: 1909 init1: 629 opt: 751  Z-score: 422.3  bits: 85.2 E(85289): 8.8e-17
Smith-Waterman score: 961; 65.1% identity (74.1% similar) in 189 aa overlap (90-278:2-169)

      60        70        80        90       100       110         
pF1KE0 SCSSCGKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGC
                                     : :: : :::::      .::.: .: :.:
NP_005                              MGCCGCS-GGCGS------SCGGCDSSCGSC
                                             10              20    

     120       130       140       150       160       170         
pF1KE0 GSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGS
       :::: ::: :::.:: ::::.:::::::::::::: :::::: :::.:::::     :..
NP_005 GSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCG-----CSQ
           30        40        50        60        70              

     180       190       200       210       220       230         
pF1KE0 CGGCKGGCGSCGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSC
       :. ::  :  :.   .::::.:  :  .:  : :  .:: :  : .:.:  :::: : ::
NP_005 CSCCKPCC--CS---SGCGSSC--CQCSCCKPYCS-QCSCCKPCCSSSGR-GSSCCQSSC
      80             90         100        110       120        130

     240       250       260       270        
pF1KE0 CKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI
       ::::: ::::::::::::::::::::: :::::: ::::
NP_005 CKPCCSSSGCGSSCCQSSCCKPCCSQSRCCVPVCYQCKI
              140       150       160         

>>NP_000418 (OMIM: 152445,604117) loricrin [Homo sapiens  (312 aa)
 initn: 700 init1: 295 opt: 449  Z-score: 263.4  bits: 56.7 E(85289): 6.2e-08
Smith-Waterman score: 518; 44.0% identity (56.0% similar) in 250 aa overlap (4-213:51-298)

                                          10        20          30 
pF1KE0                            MGCCGCSGGCGSSCGGCGSGC--GGCGSGCGGC
                                     :: ::: : : ::::.:   :: :.: :::
NP_000 GGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSSGGGGGGGIGGC
               30        40        50        60        70        80

                     40        50           60        70           
pF1KE0 GSGCGGS-------GSSCCVPVCCCKP---VCCRVPTCSCSSCGKGGCGSSGG--SKGG-
       :.: :::       :::     :  .      :     . :: : .:: ::::  :.:: 
NP_000 GGGSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGSGCFSSGGGGSSGGG
               90       100       110       120       130       140

         80                 90        100       110          120   
pF1KE0 --CGSCGG---------CKGGCG-SCGGSKGGCGSCGGSKGGCGS-CGGSKGG--CGSGC
         : : ::         :..  : : :::.:: ..: .: :: :: :: : ::  ::.: 
NP_000 SGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSGCGGGS
              150       160       170       180       190       200

            130       140       150       160           170        
pF1KE0 -GGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSCGC--SKGACGS--CGGSKGGCG
        :: ::.        .  :   :. . .: : :: :. ::  : :. ::  :::...: :
NP_000 SGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIG
              210       220       230       240       250       260

      180         190          200       210       220       230   
pF1KE0 SCGGC--KGGCGSCGGSK---GGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSS
       :  ::  .:: . :::..   :: ::. :: ::: :::.:                    
NP_000 S--GCIISGGGSVCGGGSSGGGGGGSSVGGSGSGKGVPICHQTQQKQAPTWPSK      
                270       280       290       300       310        

           240       250       260       270        
pF1KE0 CSQCSCCKPCCCSSGCGSSCCQSSCCKPCCSQSSCCVPVCCQCKI

>>NP_061978 (OMIM: 600985,606408,615963) tenascin-X isof  (4242 aa)
 initn: 185 init1: 154 opt: 400  Z-score: 228.0  bits: 53.9 E(85289): 5.9e-06
Smith-Waterman score: 420; 30.7% identity (44.7% similar) in 313 aa overlap (7-274:184-483)

                                       10           20             
pF1KE0                         MGCCGCSGGCGSSC---GGCGSG-C----GGCGSGC
                                     ::.: ..:   : :  : :    :  : .:
NP_061 CTCSCEPGWGGPTCSDPTDAEIPPSSPPSASGSCPDDCNDQGRCVRGRCVCFPGYTGPSC
           160       170       180       190       200       210   

         30        40        50        60        70        80      
pF1KE0 G--GCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCG-GC
       :  .: . : : :  :   :: :. .    : ::  :: .: :.. :  .::   :  : 
NP_061 GWPSCPGDCQGRGR-CVQGVCVCR-AGFSGPDCSQRSCPRG-CSQRGRCEGGRCVCDPGY
           220        230        240       250        260       270

           90         100         110       120         130        
pF1KE0 KGG-CG--SCGGSKGGCGSCGGSKGGC--GSCGGSKGGCGSGCG--GCGSSCCVPVCCCK
        :  ::  ::     ::..    .: :  : :  . :  :  ::  .:  .:     :  
NP_061 TGDDCGMRSC---PRGCSQ----RGRCENGRCVCNPGYTGEDCGVRSCPRGCSQRGRCKD
              280              290       300       310       320   

      140       150        160           170          180          
pF1KE0 PMCCCVPACSCSSCGKGGCG-SCG----CSKGACGSCGGSKG-GCGS--CG-GCKGGCGS
         : : :. .  .::  .:  .::    :  : :    :  :  :..  :   :.:  : 
NP_061 GRCVCDPGYTGEDCGTRSCPWDCGEGGRCVDGRCVCWPGYTGEDCSTRTCPRDCRGR-GR
           330       340       350       360       370       380   

     190       200       210       220       230               240 
pF1KE0 CGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGC-----GSSCSQCSC---CK
       :    : :    :  :. :::  :  .:.. : :  ..  :     :..:.. .:   :.
NP_061 C--EDGECICDTGYSGDDCGVRSCPGDCNQRGRCEDGRCVCWPGYTGTDCGSRACPRDCR
              390       400       410       420       430       440

                      250       260       270                      
pF1KE0 P--------CCCSSG-CGSSCCQSSCCKPCCSQSSCCVPVC-CQCKI             
                : :..:  : .:   ::   : ... :    : :                 
NP_061 GRGRCENGVCVCNAGYSGEDCGVRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTRACPGD
              450       460       470       480       490       500

NP_061 CRGRGRCVDGRCVCNPGFTGEDCGSRRCPGDCRGHGLCEDGVCVCDAGYSGEDCSTRSCP
              510       520       530       540       550       560

>>XP_016878162 (OMIM: 612454) PREDICTED: multiple epider  (1021 aa)
 initn: 147 init1:  99 opt: 360  Z-score: 212.7  bits: 49.1 E(85289): 4.2e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)

                                            10        20        30 
pF1KE0                            MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
                                     : :..:  :    : :.   :  :. :.  
XP_016 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
             210       220       230       240       250       260 

               40        50         60         70           80     
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
       :  :  :.. :   : :     : .:   : :..   :  :      :: :  :..   :
XP_016 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
             270        280       290       300       310       320

          90       100       110       120       130         140   
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
       ..: :.:. . :.:    : ::    :  ..  :  :  : :  : .: : :       :
XP_016 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
               330       340           350         360        370  

              150       160       170       180       190       200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
        :   ::.:.   .:   . .:  :  :.       : . . :..  :.:  . :  :  
XP_016 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
            380       390       400       410       420       430  

               210         220       230           240       250   
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
       :. .:..:   : :   :::.. :.:.   :.:  .:..     .:  ::   ::  .  
XP_016 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
            440       450       460         470       480          

           260       270                                           
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI                                 
       :. ::    :.... : :.   :.:                                   
XP_016 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
      490          500       510       520       530       540     

>>XP_016878161 (OMIM: 612454) PREDICTED: multiple epider  (1044 aa)
 initn: 147 init1:  99 opt: 360  Z-score: 212.6  bits: 49.1 E(85289): 4.2e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)

                                            10        20        30 
pF1KE0                            MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
                                     : :..:  :    : :.   :  :. :.  
XP_016 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
             210       220       230       240       250       260 

               40        50         60         70           80     
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
       :  :  :.. :   : :     : .:   : :..   :  :      :: :  :..   :
XP_016 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
             270        280       290       300       310       320

          90       100       110       120       130         140   
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
       ..: :.:. . :.:    : ::    :  ..  :  :  : :  : .: : :       :
XP_016 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
               330       340           350         360        370  

              150       160       170       180       190       200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
        :   ::.:.   .:   . .:  :  :.       : . . :..  :.:  . :  :  
XP_016 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
            380       390       400       410       420       430  

               210         220       230           240       250   
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
       :. .:..:   : :   :::.. :.:.   :.:  .:..     .:  ::   ::  .  
XP_016 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
            440       450       460         470       480          

           260       270                                           
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI                                 
       :. ::    :.... : :.   :.:                                   
XP_016 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
      490          500       510       520       530       540     

>>NP_115821 (OMIM: 612454) multiple epidermal growth fac  (1044 aa)
 initn: 147 init1:  99 opt: 360  Z-score: 212.6  bits: 49.1 E(85289): 4.2e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)

                                            10        20        30 
pF1KE0                            MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
                                     : :..:  :    : :.   :  :. :.  
NP_115 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
             210       220       230       240       250       260 

               40        50         60         70           80     
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
       :  :  :.. :   : :     : .:   : :..   :  :      :: :  :..   :
NP_115 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
             270        280       290       300       310       320

          90       100       110       120       130         140   
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
       ..: :.:. . :.:    : ::    :  ..  :  :  : :  : .: : :       :
NP_115 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
               330       340           350         360        370  

              150       160       170       180       190       200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
        :   ::.:.   .:   . .:  :  :.       : . . :..  :.:  . :  :  
NP_115 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
            380       390       400       410       420       430  

               210         220       230           240       250   
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
       :. .:..:   : :   :::.. :.:.   :.:  .:..     .:  ::   ::  .  
NP_115 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
            440       450       460         470       480          

           260       270                                           
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI                                 
       :. ::    :.... : :.   :.:                                   
NP_115 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
      490          500       510       520       530       540     

>>XP_016878160 (OMIM: 612454) PREDICTED: multiple epider  (1092 aa)
 initn: 147 init1:  99 opt: 360  Z-score: 212.4  bits: 49.1 E(85289): 4.3e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)

                                            10        20        30 
pF1KE0                            MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
                                     : :..:  :    : :.   :  :. :.  
XP_016 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
             210       220       230       240       250       260 

               40        50         60         70           80     
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
       :  :  :.. :   : :     : .:   : :..   :  :      :: :  :..   :
XP_016 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
             270        280       290       300       310       320

          90       100       110       120       130         140   
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
       ..: :.:. . :.:    : ::    :  ..  :  :  : :  : .: : :       :
XP_016 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
               330       340           350         360        370  

              150       160       170       180       190       200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
        :   ::.:.   .:   . .:  :  :.       : . . :..  :.:  . :  :  
XP_016 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
            380       390       400       410       420       430  

               210         220       230           240       250   
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
       :. .:..:   : :   :::.. :.:.   :.:  .:..     .:  ::   ::  .  
XP_016 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
            440       450       460         470       480          

           260       270                                           
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI                                 
       :. ::    :.... : :.   :.:                                   
XP_016 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
      490          500       510       520       530       540     

>>XP_016878159 (OMIM: 612454) PREDICTED: multiple epider  (1097 aa)
 initn:  99 init1:  99 opt: 360  Z-score: 212.4  bits: 49.1 E(85289): 4.3e-05
Smith-Waterman score: 360; 28.5% identity (46.8% similar) in 295 aa overlap (4-276:232-510)

                                            10        20        30 
pF1KE0                            MGCCGCSGG--CGSSCGGCGSGCGGCGSGCGG-
                                     : :..:  :    : :.   :  :. :.  
XP_016 GECLCAPGYTGVYCEELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQP
             210       220       230       240       250       260 

               40        50         60         70           80     
pF1KE0 CGSGCGGSGSSCCVPVCCCKPVCCRVP-TCSCSSCGKGG-CGSSG--GSKG-GCGSCGGC
       :  :  :.. :   : :     : .:   : :..   :  :      :: :  :..   :
XP_016 CPPGTFGQNCSQDCP-CHHGGQCDHVTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDC
             270        280       290       300       310       320

          90       100       110       120       130         140   
pF1KE0 KGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCCVPVCCCKP--MCCC
       ..: :.:. . :.:    : ::    :  ..  :  :  : :  : .: : :       :
XP_016 HNG-GQCSPTTGACECEPGYKGP--RC--QERLCPEGLHGPG--CTLP-CPCDADNTISC
               330       340           350         360        370  

              150       160       170       180       190       200
pF1KE0 VP---ACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSG
        :   ::.:.   .:   . .:  :  :.       : . . :..  :.:  . :  :  
XP_016 HPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCAPGFMGEV
            380       390       400       410       420       430  

               210         220       230           240       250   
pF1KE0 CG-GCGSGCGVPVCC--CSCSSCGSCAGSKGGCGSSCSQ----CSCCKPCCCSSGCGSSC
       :. .:..:   : :   :::.. :.:.   :.:  .:..     .:  ::   ::  .  
XP_016 CAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSC--TCKEGWQGLDCTLPC--PSGTWGLN
            440       450       460         470       480          

           260       270                                           
pF1KE0 CQSSCCKPCCSQSSCCVPV--CCQCKI                                 
       :. ::    :.... : :.   :.:                                   
XP_016 CNESCT---CANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCD
      490          500       510       520       530       540     

>>NP_112228 (OMIM: 608820) keratin-associated protein 1-  (167 aa)
 initn: 284 init1: 185 opt: 338  Z-score: 208.2  bits: 45.6 E(85289): 7.3e-05
Smith-Waterman score: 381; 37.2% identity (51.4% similar) in 183 aa overlap (102-276:4-160)

              80        90       100       110       120       130 
pF1KE0 SGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSGCGGCGSSCC
                                     :  :  :  ::. : : :::.:  :  :::
NP_112                            MTCCQTSFCGYPSCSTS-GTCGSSC--CQPSCC
                                          10         20          30

             140       150       160       170       180       190 
pF1KE0 VPVCCCKPMCCCVPACSCSSCGKGGCGSCGCSKGACGSCGGSKGGCGSCGGCKGGCGSCG
         . ::.: :: .  :.  : . .:  : .: . .:  :        ::  :. .:  : 
NP_112 -ETSCCQPSCCQTSFCGFPSFSTSGTCSSSCCQPSC--C------ETSC--CQPSC--CQ
                40        50        60                70           

             200        210       220       230        240         
pF1KE0 GSKGGCGSGCG-GCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCS-QCSCCKPCCCSSGC
        :.  ::.::: : : : :      . .: :. .     :  .:  . .:  :::  :  
NP_112 TSS--CGTGCGIGGGIGYG------QEGSSGAVSTRIRWCRPDCRVEGTCLPPCCVVSCT
        80          90             100       110       120         

     250            260        270             
pF1KE0 GSSCCQ-----SSCCKPC-CSQSSCCVPVCCQCKI     
         .:::     .:::.:  :.:: :: :::: :       
NP_112 PPTCCQLHHAEASCCRPSYCGQS-CCRPVCC-CYSCEPTC
     130       140       150         160       




278 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 21:04:32 2016 done: Wed Nov  2 21:04:33 2016
 Total Scan time:  5.850 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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