Result of FASTA (omim) for
pF1KE0584
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0584, 166 aa
1>>>pF1KE0584 166 - 166 aa - 166 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5412+/-0.000249; mu= 12.2331+/- 0.016
mean_var=79.4488+/-15.680, 0's: 0 Z-trim(122.9): 21 B-trim: 0 in 0/51
Lambda= 0.143890
statistics sampled from 41722 (41748) to 41722 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.835), E-opt: 0.2 (0.489), width: 16
Scan time: 4.960
The best scores are: opt bits E(85289)
NP_001316645 (OMIM: 611727) protein FAM163A [Homo ( 167) 378 86.7 1.9e-17
NP_001316642 (OMIM: 611727) protein FAM163A [Homo ( 167) 378 86.7 1.9e-17
NP_775780 (OMIM: 611727) protein FAM163A [Homo sap ( 167) 378 86.7 1.9e-17
NP_001316641 (OMIM: 611727) protein FAM163A [Homo ( 167) 378 86.7 1.9e-17
XP_006711240 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
XP_016855880 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
XP_016855879 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
NP_001316648 (OMIM: 611727) protein FAM163A [Homo ( 167) 378 86.7 1.9e-17
XP_011507519 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
XP_016855882 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
NP_001316646 (OMIM: 611727) protein FAM163A [Homo ( 167) 378 86.7 1.9e-17
XP_006711238 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
NP_001316643 (OMIM: 611727) protein FAM163A [Homo ( 167) 378 86.7 1.9e-17
XP_016855875 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
NP_001316644 (OMIM: 611727) protein FAM163A [Homo ( 167) 378 86.7 1.9e-17
XP_016855878 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
XP_006711237 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
XP_016855877 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
XP_016855881 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
XP_016855876 (OMIM: 611727) PREDICTED: protein FAM ( 167) 378 86.7 1.9e-17
NP_001316647 (OMIM: 611727) protein FAM163A [Homo ( 167) 378 86.7 1.9e-17
>>NP_001316645 (OMIM: 611727) protein FAM163A [Homo sapi (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
NP_001 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
NP_001 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
NP_001 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>NP_001316642 (OMIM: 611727) protein FAM163A [Homo sapi (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
NP_001 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
NP_001 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
NP_001 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>NP_775780 (OMIM: 611727) protein FAM163A [Homo sapiens (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
NP_775 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
NP_775 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
NP_775 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>NP_001316641 (OMIM: 611727) protein FAM163A [Homo sapi (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
NP_001 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
NP_001 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
NP_001 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>XP_006711240 (OMIM: 611727) PREDICTED: protein FAM163A (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
XP_006 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
XP_006 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
XP_006 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>XP_016855880 (OMIM: 611727) PREDICTED: protein FAM163A (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
XP_016 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
XP_016 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
XP_016 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>XP_016855879 (OMIM: 611727) PREDICTED: protein FAM163A (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
XP_016 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
XP_016 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
XP_016 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>NP_001316648 (OMIM: 611727) protein FAM163A [Homo sapi (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
NP_001 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
NP_001 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
NP_001 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>XP_011507519 (OMIM: 611727) PREDICTED: protein FAM163A (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
XP_011 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
XP_011 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
XP_011 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
>>XP_016855882 (OMIM: 611727) PREDICTED: protein FAM163A (167 aa)
initn: 337 init1: 266 opt: 378 Z-score: 434.1 bits: 86.7 E(85289): 1.9e-17
Smith-Waterman score: 378; 42.4% identity (62.9% similar) in 170 aa overlap (1-166:1-167)
10 20 30 40 50
pF1KE0 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESE----EDEEEPDFAVHSHLP
:::::::::::::::::::::::::::::::::::::. .: :.:.: :. .: . :
XP_016 MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKSGTEVADEEEEREHDLPTHPRGP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE0 PLHSNRNLVLTNGPALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLN
.. . .: . .: : .: :: : . : .:: : :... . .
XP_016 TCNACSSQALDGRGSLAPLTSEPCSQPCGVAASHCTTCSPYSSP-FYIRTADMVPNG--G
70 80 90 100 110
120 130 140 150 160
pF1KE0 GGERVLYKSVSQEDVELPPGGFGGLQALNPNRLSAMREAFARSRSISTDV
::::. . . .. : ... :. . .. ::::. :.:::::
XP_016 GGERLSFAPTYYKEGGPPSLKLAAPQSYPVTWPGSGREAFTNPRAISTDV
120 130 140 150 160
166 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Nov 2 21:20:34 2016 done: Wed Nov 2 21:20:35 2016
Total Scan time: 4.960 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]