GENSCAN 1.0	Date run:  2-Nov-116	Time: 21:50:55

Sequence gi568815587f:49932874_50133791 : 200918 bp : 40.19% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10348  10539  192  0  0   66   97    89 0.147   6.61
 1.02 Intr +  17100  17151   52  2  1  100    3    78 0.089  -1.94
 1.03 Intr +  19521  20150  630  1  0   91   29   322 0.038  17.81
 1.04 Intr +  27678  27735   58  1  1   85   28    53 0.002  -3.98
 1.05 Term +  31694  31970  277  2  1   65   41   180 0.024   4.95
 1.06 PlyA +  32021  32026    6                               1.05

 2.00 Prom +  32633  32672   40                              -3.75
 2.01 Sngl +  35678  36121  444  1  0   71   49   243 0.944  14.69
 2.02 PlyA +  36461  36466    6                               1.05

 3.03 PlyA -  38413  38408    6                               1.05
 3.02 Term -  44617  44516  102  1  0   27   49    87 0.195  -4.00
 3.01 Init -  49628  48756  873  2  0   55   83   306 0.387  21.36
 3.00 Prom -  53398  53359   40                              -7.35

 4.00 Prom +  57721  57760   40                              -5.85
 4.01 Init +  62351  62740  390  1  0   55   82   218 0.494  14.72
 4.02 Term +  69549  70073  525  2  0   17   38   294 0.837  10.57
 4.03 PlyA +  70903  70908    6                               1.05

 5.00 Prom +  71285  71324   40                             -10.05
 5.01 Init +  74486  75114  629  1  2   44   19   285 0.586  12.06
 5.02 Intr +  75514  76243  730  1  1   30   73   238 0.713   7.00
 5.03 Intr +  80609  80760  152  1  2   36   97   118 0.633   5.54
 5.04 Intr +  86192  86324  133  2  1   61   93   148 0.898  12.33
 5.05 Intr +  90712  90927  216  0  0   16   18   214 0.128   4.98
 5.06 Intr +  94286  94383   98  1  2   25   93    43 0.043  -3.61
 5.07 Intr +  94697  94821  125  2  2   27   94   114 0.122   5.21
 5.08 Intr + 100194 100592  399  1  0   74   29   335 0.266  19.75
 5.09 Intr + 111627 111745  119  1  2   48   89    96 0.795   4.96
 5.10 Term + 111948 112031   84  2  0   91   39    73 0.792  -0.63
 5.11 PlyA + 112063 112068    6                               1.05

 6.00 Prom + 118117 118156   40                              -5.85
 6.01 Sngl + 141711 142094  384  2  0  101   54   265 0.658  20.34
 6.02 PlyA + 148267 148272    6                               1.05

 7.04 PlyA - 148559 148554    6                               1.05
 7.03 Term - 170024 169891  134  0  2   96   38    98 0.236   2.87
 7.02 Intr - 178328 178304   25  2  1   85   98    12 0.076  -1.42
 7.01 Intr - 183497 183291  207  2  0   77   83    69 0.062   3.65

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  27097  26879  219  1  0   87  103   122 0.839  12.28


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:49932874_50133791|GENSCAN_predicted_peptide_1|402_aa
MTTSSNAKTPNKFIGIMKDQTNMIPPKEINKSTVIDPKEMEIYELSDKEFKIIVFKNSWE
YITQFLRLTLRGPEPCKDPFVCNVINHHLKYMANRNNVTEFILLGLTENPKMQKIIFVVF
SVIYINAMIGNVLIVVTITASPSLRSPMYFFLAYLSFIDACYSSVNTPKLITDSLYENKT
ILFNGCMTQVFGEHFFRGVEVILLTVMAYDHYVAICKPLHYTTVMKQHVCSLLVGVSWVG
GFLHATIQILFICQLPFCGPNVIDHFMCDLYTLINLACTNTHTLGLFIAANTQRCFDAAE
MPLPLPGGLPWNTTSRKQGNKAGWSLNMFDKLTEVGFRRWVITYSSKLNKHVLSQCKEAK
KLEKRLEEWLTGITNVEKSLNDLMELKNTAQDLCEAYTSFNT

>gi568815587f:49932874_50133791|GENSCAN_predicted_CDS_1|1209_bp
atgacaacttcttcaaatgcaaagacaccaaacaagtttataggaatcatgaaggatcag
acaaacatgataccaccaaaggaaataaataaatcaacagtaattgaccctaaagaaatg
gagatatatgaactgtctgacaaggaattcaaaataattgtcttcaagaattcatgggaa
tacataacacagtttcttcgtcttaccctgcggggaccagagccatgtaaagatccgttt
gtgtgtaatgtaattaaccatcatttgaaatacatggcgaatagaaacaatgtgacagag
tttattctattggggcttacagagaatccaaaaatgcagaaaatcatatttgttgtgttt
tctgtcatctacatcaacgccatgataggaaatgtgctcattgtggtcaccatcactgcc
agcccatcactgagatcccccatgtactttttcctggcctatctctcctttattgatgcc
tgctattcctctgtcaatacccctaagctgatcacagattcactctatgaaaacaagact
atcttattcaatggatgtatgactcaagtctttggagaacattttttcagaggtgttgag
gtcatcctacttactgtaatggcctatgaccactatgtggccatctgcaagcccttgcac
tataccaccgtcatgaagcagcatgtttgtagcctgctagtgggagtgtcatgggtagga
ggctttcttcatgcaaccatacagatcctcttcatctgtcaattacctttctgtggtcct
aatgtcatagatcactttatgtgtgatctctacactttgatcaatcttgcctgcactaat
acccacactctaggactcttcattgctgccaacacacaaaggtgctttgatgcagcagaa
atgcctctgccccttcctggagggttgccctggaacacaacttctcgtaaacaagggaac
aaagctggatggagtttgaatatgtttgacaaattgacagaagtaggcttcagaaggtgg
gtaataacatactcctccaagctaaacaagcatgttctaagccaatgcaaggaagctaaa
aaacttgaaaaaaggttagaggaatggctaactggaataacaaatgtagagaagagctta
aatgacctgatggagctgaaaaacacagcacaagatctttgtgaagcatacacaagtttc
aatacctga

>gi568815587f:49932874_50133791|GENSCAN_predicted_peptide_2|147_aa
MGKDFMSETPKAMTTKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWENIFAIFSSDKGL
ISRIYNELKQIDKKKTNNAIKKWAKYRNKHFSKEDIYAAKRHMKKCSSSLAIREMQIKTT
MRYHLTPVRMVIIKNQETTGAGEDVEK

>gi568815587f:49932874_50133791|GENSCAN_predicted_CDS_2|444_bp
atgggcaaggacttcatgtctgaaacaccaaaagcaatgacaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacagacaacctacagaatgggagaacatttttgcaatcttctcatctgacaaagggcta
atatccagaatctacaatgaactcaaacaaattgacaagaaaaaaacaaacaacgccatc
aaaaagtgggcaaagtataggaacaaacacttttcaaaagaagacatttatgcagccaaa
agacacatgaaaaaatgctcatcatcactggccatcagagagatgcaaatcaaaaccaca
atgagataccatctcacaccagttagaatggtgatcattaaaaatcaggaaacaacaggt
gctggagaggatgtggagaaatag

>gi568815587f:49932874_50133791|GENSCAN_predicted_peptide_3|324_aa
MEKKKNVTEFILIGLTQNPIMEKVTFVVFLVLYMITLSGNLLIVVTITTSQALSSPMYFF
LTHLSLIDTVYSSSSAPKLIVDSFQEKKIISFNGCMAQAYAEHIFGATEIILLTVMACDC
YVAICKPLNYTTIMSHSLCILLVAVAWVGGFLHATIQILFTVWLPFCGPNVIGHFMCDLY
PLLKLVCIDTHTLGLFVAVNSGFICLLNFLILVVSYVIILRSLKNNSLEGRCKALSTCIS
HIIVVVLFFVPCIFVYLRSVTTLPIDKAVAVFYTMVVPMLNPVVYTLRNAESIIAGGLRE
REQNTLSDAAPILSGAIVQKRARL

>gi568815587f:49932874_50133791|GENSCAN_predicted_CDS_3|975_bp
atggagaagaaaaagaatgtgactgaattcattttaataggtcttacacagaaccccata
atggagaaagtcacgtttgtagtatttttggttctttacatgataacactttcaggcaac
ctgctcattgtggttaccattaccaccagccaggctctgagctcccccatgtacttcttc
ctgacccacctttctttgatagacacagtttattcttcttcttcagctcctaagttgatt
gtggattcctttcaagagaagaaaatcatctcctttaatgggtgtatggctcaagcctat
gcagaacacatttttggtgctactgagatcatcctgctgacagtgatggcctgtgactgc
tatgtggccatctgcaaacctctgaactacacaaccattatgagccacagcctgtgcatt
ctcctggtggcagtggcctgggtgggaggatttcttcatgcaactattcagattctcttt
acagtatggctgcccttctgtggccccaatgtcataggccacttcatgtgtgacttgtac
ccattgttaaaacttgtttgcatagacactcatacccttggtctctttgttgctgtgaac
agtgggtttatctgcttattaaacttccttatcttggtggtatcctatgtgatcatcttg
agatctttaaagaacaatagcttggaggggaggtgtaaagccctctccacctgtatttct
cacatcatagtagttgtcttattctttgtgccctgtatatttgtgtatctgcgctcagtg
accactctgcccattgataaagctgttgctgtattttatactatggtggtcccaatgtta
aatcccgtggtctacacactcagaaatgctgagtcaatcatcgctggtgggctccgggag
agggaacaaaataccctaagtgatgcagctcccattttatctggtgcaattgtccagaaa
agggcaaggctgtga

>gi568815587f:49932874_50133791|GENSCAN_predicted_peptide_4|304_aa
MVRVAASLTRPGDKLAGEIMENPPAPSGCWAYWLCFKPVSLPGAPSHRMGLKEVPEQLRI
SGQDYTLVLSEGFWTNSSLQLPNQPSAIGSPAFLSQFPPFLPAIVMSPIISIYAMLRKFL
QFSEIVLLGKHHLLAGGQPTPNQCTKQKYNQEASQNPPHSPATSTGARCWYPQLKDLKTD
DIKGLFVDTPQYHSGARQLHWVTRPKRAKTITAVCLSVRPIHRGMGRIPHQGSTLGDKRI
GTAALEPDIFPLTQSTQMRRNQKNNSSDMTKQGSLTPPKDHTSSPTVDPNPDEISELPEK
EFRS

>gi568815587f:49932874_50133791|GENSCAN_predicted_CDS_4|915_bp
atggttagagtggctgccagccttacaagaccaggggacaagcttgctggggagatcatg
gagaatcccccagcaccctcaggttgctgggcatattggctatgtttcaaaccagtttcc
cttcctggagcacccagccatcgtatggggcttaaagaggtcccggagcaactaagaatt
tctggccaggactacaccctggtgttatctgagggcttctggaccaactccagccttcaa
ctgcccaaccaaccgtcggcaataggatctccagcttttctatcacaatttcctcctttc
ctaccggcaattgtcatgtctcctatcatctctatatatgcaatgctccggaaattttta
cagttcagcgaaatagtcctgttaggaaagcaccacctcctggctggaggccaaccaaca
ccaaaccagtgcaccaaacaaaaatacaaccaagaagcttcacaaaatccacctcactcc
cctgctacctccactggagcaaggtgctggtatccacagctgaaagacttgaagacagac
gacattaaaggactctttgttgatactccccagtaccactctggagcacggcagctccac
tgggtgactagacccaaaagagcaaaaacaataactgcagtttgcctctcagtaaggccc
atccataggggaatggggagaataccacatcaagggagcaccttgggggacaaaagaata
ggaacagcagcacttgagcccgatatcttccctctgacacagtctacccaaatgagaagg
aaccagaaaaacaattctagtgatatgacaaaacaaggttctttaacacccccaaaagat
cacaccagctcaccaacagtggatccaaacccagatgaaatctctgaattgccagaaaaa
gaattcagaagttga

>gi568815587f:49932874_50133791|GENSCAN_predicted_peptide_5|894_aa
MVKGSIQQEELTILNRYAPNTGAPRFIKQVLGDLQRDSDSHTIIMGDFNTPLSTLDRSMR
QKVNKDIQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYTEIDHMVGSKALLSKCK
RTEIITNCLSDHSTIKLELRIKKLTQNCSTTWKLNNLPLNDYWVHNEMKAEIKMFFETNE
NNDTAHQNLWDTFKTVCRGKFIALNAHKRKLNQEEVESLNRPITGSQIEAIINSLPTKKS
PGPDEFTAEFYQRYKGELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENF
RPISLMNIDAEILNKMLANRIQQHIKMLIHHDQVGFIPGMQGWLNIPKSINVIQHINRTN
DKNHMIISIDAEKAFDKIQQPFMLKILNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEA
FPLKTNTRQGCSLLALVFNIVLEFLARATRQEKTLPDPIHVEDVPGPKSEFCSVFPSTPQ
ASGNFQNQLFQDSAEAIPLDEGRSACMTQLFAEHFFGRVEIILLVVMAYDRYETICKPLY
YLITMNRKSSPEDSVAIKRTGLQQLESAVLTDTVLLSLEISTWNLPPKALSTSKTLSCKT
NGPPGPDKEILFVYIALPGLSWLKGAKVQMRPLIQRVQGPSFHMVLGLQVYRRATGMELP
KALRAQLLFHQCGLDVRHVVKGDYFGALGFNDYPDIFYSSSIAPKMIFDLISENNTISFN
GCMTQLFTEHFFAAAETILLSVMAYDCYVAICKPLHYATIMTQSMCGFLMVVAGILGFVH
GGIQTLFIAQLPFCGPNVIDHFMCDLVPLLELACTDTHTLGPLIAANNFLFDEETPRTLT
HIINLGQFRKIFQEYGNKAFPFPTRKRVQEKNTMTYTCDPQEDLKLLFNKHTDK

>gi568815587f:49932874_50133791|GENSCAN_predicted_CDS_5|2685_bp
atggtaaagggatcaattcaacaagaagaactaactatcctaaatagatatgcacccaat
acaggagcacccagattcataaagcaagtccttggagacctacaaagagactcagactcc
cacacaataataatgggagactttaacaccccactgtcaacattagacagatcaatgaga
cagaaagttaacaaggatatccaggaattgaactctgctctgcatcaagcggacctaata
gacatctacagaactctccaccccaaatcaacagaatatacattcttttcagcaccacac
cacacctataccgaaattgaccacatggttggaagtaaagcactcctcagcaaatgtaaa
agaacagaaattataacaaactgtctctcagaccacagtacaatcaaactagaactcagg
attaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgcccctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgag
aacaacgacacagcacaccagaatctctgggacacattcaaaacagtgtgtagagggaaa
tttatagcactaaatgcccacaagagaaaactaaaccaggaagaagtggaatctctgaat
agaccaataacaggctctcaaattgaggcaataattaatagcttaccaaccaaaaaaagt
ccaggaccggatgaattcacagccgaattctaccagaggtacaagggggagctggtacca
ttccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattttat
gaggccagcatcatcctgataccaaagcctggcagagacacaacaaagaaagagaatttt
agaccaatatccctgatgaatatcgatgcagaaatcctcaataaaatgctggcaaaccga
atccagcagcacatcaaaatgcttatccatcatgatcaagtgggcttcatccctgggatg
caaggctggctcaacatacccaaatcaataaacgtaatccagcatataaacagaaccaac
gacaaaaaccatatgattatctcaatagatgcagaaaaggcctttgacaaaattcaacaa
cctttcatgctaaaaattctcaataaattaggtattgatgggacgtatctcaaaataata
agagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaagca
ttccctttgaaaactaacacaagacagggatgctctctcttagcactcgtattcaacata
gtgttggaatttctggccagggcaaccaggcaggaaaagaccctaccagatcccattcat
gtagaggatgtccctggtcctaagtctgaattctgttcagtcttcccttccactccacag
gcatcaggaaatttccagaatcaactattccaagacagcgctgaagcaattcccctggat
gagggccgaagtgcgtgcatgacccagctctttgcagaacatttctttgggagagttgag
atcattctgctcgtggtaatggcctatgaccgctatgagacaatctgcaagcccctgtac
tacctgatcacaatgaacaggaagtcctcaccagaggactctgtggccataaaaagaaca
ggacttcagcaactcgaatcagctgtcttaacagacactgtcttgttgtcacttgagata
agcacctggaatctgccaccgaaggctctgtcgacatcaaagacgctttcttgcaagacc
aatggaccacctggcccagacaaggaaattctttttgtctacattgctctccctggactg
tcatggctaaaaggggccaaagtacagatgaggccattgattcagagggtgcaaggccca
agcttccacatggtgttgggcctacaggtgtacagaagagccacagggatggagctgccc
aaggccttgagagcccaacttctttttcatcagtgtggcctggatgtgagacatgtagtc
aaaggagattactttggagctttaggatttaatgactacccagatattttctactcttct
tccatagcccctaaaatgatctttgacttgatctctgaaaacaacaccatatccttcaat
ggctgcatgactcagctcttcacagaacatttctttgcggcagctgagaccatcttatta
agtgtcatggcctacgactgctatgtggccatctgtaagcccttgcactatgcaaccatc
atgacccaatctatgtgtggattcctgatggtggtggctggaattctgggatttgtgcat
ggaggaatccagactttgttcatagcccagttaccattctgtggccccaatgtcatcgac
cactttatgtgtgatttagtacctcttctggagctggcctgcacagacactcacacttta
gggcctctgattgctgccaacaatttcctgtttgatgaggagacacctagaacgctcact
catattatcaacttaggccagtttcgaaagatctttcaagaatatggaaataaagcattt
ccctttcccacaaggaaaagagtgcaagagaagaacaccatgacctacacttgtgatcct
caagaagatttgaagctgttgtttaacaaacacacagataagtag

>gi568815587f:49932874_50133791|GENSCAN_predicted_peptide_6|127_aa
MRRQEAGPREAEMRTILACRVRWEEELGRERPTRGSSGPVEDAKKQTLSLERVSRGMSLV
YRVHCDAGDEPVEADFWTILGCRHRWEEELGLDMLTGGSFGPGVDVKKQNLGEKRPPGGP
SLAYKGH

>gi568815587f:49932874_50133791|GENSCAN_predicted_CDS_6|384_bp
atgaggagacaggaggctggccctcgagaggccgagatgaggactattttggcctgcaga
gtccgctgggaggaagagctgggccgggagaggccaactagaggaagttcagggcctgta
gaggatgcaaagaagcaaacgctaagcttggaaagggtgtcgagaggcatgagtttggtc
tacagagtccactgcgatgcaggagatgagcctgtagaggctgatttctggacaattttg
ggctgcagacaccgttgggaggaagagcttggcctggacatgctgactggaggaagtttt
gggcctggagtggatgtcaaaaagcaaaatcttggcgagaaaagaccaccaggaggcccg
agccttgcctataaaggacattga

>gi568815587f:49932874_50133791|GENSCAN_predicted_peptide_7|121_aa
QVGNTRFVESVRRHLGGHFDPWGKTKYPQVKTRREKSVKLLGDVWIHLTELNLSFDLAGW
NTLFVESVKKVVSGCLPAQALGLIEAVKVPYSVFQSNPEFLCVEGLPEGIPFRSPTCFGI
P

>gi568815587f:49932874_50133791|GENSCAN_predicted_CDS_7|366_bp
caggttggaaacactcgttttgtagaatctgtgaggagacatttgggaggccattttgac
ccatggggaaaaaccaaatatccccaggtaaaaactagaagggagaaatctgtgaaacta
cttggtgatgtgtggatacatctcacagagttaaatctttcttttgatttagcaggttgg
aacactctttttgtagaatctgtgaagaaagttgtaagtggctgcctgccagctcaagct
cttggactcattgaggcagtaaaagtaccatattctgtgtttcaatcaaaccccgagttc
ctatgtgtagaaggcttgccagaggggattccctttcgaagccctacctgctttggaatt
ccatga