GENSCAN 1.0	Date run:  2-Nov-116	Time: 22:52:38

Sequence gi568815597r:186343982_186546482 : 202501 bp : 36.10% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.25 Intr -    597    394  204  0  0   45   62   225 0.960  14.07
 1.24 Intr -   1715   1599  117  2  0   68  108   163 0.999  16.04
 1.23 Intr -   2306   2154  153  2  0   16   99   228 0.999  16.05
 1.22 Intr -   3477   3311  167  1  2  103   91   205 0.995  21.06
 1.21 Intr -   6407   6242  166  2  1   40   94    52 0.890  -0.39
 1.20 Intr -   7489   7349  141  1  0   75   76    67 0.908   3.83
 1.19 Intr -   8129   7995  135  2  0   77   91    66 0.980   5.64
 1.18 Intr -   9869   9707  163  1  1   53   81   190 0.998  13.86
 1.17 Intr -  11571  11429  143  0  2   63  127   107 0.882  10.33
 1.16 Intr -  11787  11654  134  1  2   -2  103   146 0.971   6.54
 1.15 Intr -  12468  12305  164  2  2   64   78   173 0.999  12.60
 1.14 Intr -  13642  13416  227  1  2   65  108   201 0.995  15.66
 1.13 Intr -  14669  14562  108  2  0   11   66   133 0.855   2.96
 1.12 Intr -  16015  15818  198  1  0   71   81   299 0.995  26.13
 1.11 Intr -  16383  16292   92  1  2   23   94   103 0.679   3.19
 1.10 Intr -  16924  16784  141  2  0   37   86    74 0.674   1.50
 1.09 Intr -  17728  17641   88  1  1   21  115   118 0.999   6.42
 1.08 Intr -  17888  17808   81  2  0   59   94    56 0.822   2.22
 1.07 Intr -  18399  18307   93  0  0  111   61    55 0.953   4.34
 1.06 Intr -  19020  18856  165  0  0   44  107   118 0.972   8.54
 1.05 Intr -  27062  26989   74  0  2   37  110   105 0.998   5.81
 1.04 Intr -  29482  29378  105  2  0   72   89    74 0.862   5.17
 1.03 Intr -  31029  30897  133  0  1   60  115   193 0.507  18.50
 1.02 Intr -  31749  31578  172  2  1  132  103   260 0.702  30.92
 1.01 Init -  32598  32588   11  0  2   72   69     2 0.790  -3.39
 1.00 Prom -  33365  33326   40                              -2.25

 2.00 Prom +  34770  34809   40                              -9.15
 2.01 Init +  35805  35903   99  2  0   58   91    53 0.854   2.91
 2.02 Intr +  39041  39175  135  1  0   25   28   148 0.590   2.34
 2.03 Intr +  42007  42102   96  0  0   73   89    29 0.574   0.79
 2.04 Intr +  46730  46870  141  1  0   68   76    36 0.470   0.03
 2.05 Intr +  47715  47810   96  2  0   30  111    89 0.896   4.69
 2.06 Intr +  54332  54460  129  1  0   11   87   118 0.830   3.97
 2.07 Intr +  59163  59220   58  2  1   16   87     7 0.159  -9.06
 2.08 Intr +  62102  62287  186  0  0  101   41   145 0.437   9.84
 2.09 Term +  75028  75095   68  2  2  102   46    44 0.107  -1.28
 2.10 PlyA +  75153  75158    6                               1.05

 3.02 PlyA -  76629  76624    6                               1.05
 3.01 Sngl -  83452  83045  408  1  0    9   49   310 0.926  15.24
 3.00 Prom -  91079  91040   40                              -4.75

 4.06 PlyA -  91848  91843    6                               1.05
 4.05 Term -  93219  93152   68  1  2  124   41    96 0.955   5.62
 4.04 Intr -  97750  97636  115  1  1   74   72    33 0.007  -0.60
 4.03 Intr - 100525 100046  480  1  0  109   73   361 0.669  29.00
 4.02 Intr - 102596 102445  152  0  2   60  116    61 0.419   5.06
 4.01 Init - 112563 112557    7  0  1   64   85     0 0.128  -1.54
 4.00 Prom - 114073 114034   40                              -5.35

 5.00 Prom + 130138 130177   40                              -3.25
 5.01 Init + 136260 136306   47  2  2   45  115    52 0.655   3.81
 5.02 Term + 156563 156698  136  2  1  102   48   109 0.346   4.81
 5.03 PlyA + 161461 161466    6                               1.05

 6.03 PlyA - 161676 161671    6                               1.05
 6.02 Term - 168055 167683  373  0  1   39   44   202 0.508   4.08
 6.01 Init - 168663 168569   95  0  2   87   51    79 0.506   4.00
 6.00 Prom - 170817 170778   40                              -6.35

 7.00 Prom + 173681 173720   40                              -6.25
 7.01 Init + 179011 179221  211  0  1   60   57   186 0.897  11.69
 7.02 Intr + 179751 179910  160  1  1   29   75   131 0.294   4.02
 7.03 Intr + 185556 185610   55  0  1   79   89    26 0.268  -0.14
 7.04 Term + 197237 197518  282  1  0   64   46   170 0.581   4.84
 7.05 PlyA + 198574 198579    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  94032  93981   52  0  1   73   86    22 0.823   1.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:186343982_186546482|GENSCAN_predicted_peptide_1|1125_aa
MIQKASAKATAVATPPPSGRHRERGGIPEPAVRPYRDRCPLVAQCPEAANEDDPWHPGAL
TQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKRLSHSQ
ERLVNETRECQSLRLELEKLNNQLKALTEKNKELEIAQDRNIAIQYREKRLEQEKELLHS
QNTWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMNGLKTSNEHLQK
HVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSNELTRAVEELHK
LLKEAGEANKAIQDHLLEVEQSKDQMEKEMLEKIGRLEKELENANDLLSATKRKGAILSE
EELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVKEVEA
KAPILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQEDTDKANKQSSVLERDNRRMEIQ
VKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQR
LLVALRELGETREREEQETTSSKITELQLKLESALTELEQLRKSRQHQMQLVDSIVRQRD
MYRILLSQTTGVAIPLHASSLDDVSLASTPKRPSTSQTVSTPAPVPVIESTEAIEAKAAL
KQEIFENYKKEKAENEKIQNEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEMLQDNVEG
YRREITSLHERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLS
EVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQIEKLEHEISHLKKK
LENEVEQRHTLTRNLDVQLLDTKRQLDTETNLHLNTKELLKNAQKEIATLKQHLSNMEVQ
VASQSSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEE
SLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDDKRRAIESMEQQLS
ELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADVE
ALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEERERMLK

>gi568815597r:186343982_186546482|GENSCAN_predicted_CDS_1|3375_bp
atgattcaaaaagcctcagccaaagcgactgcggtcgccaccccgcccccttctgggcgc
catagagagcgtggcggtatcccggagcctgccgtccggccctaccgggaccgatgccct
ctagtggctcagtgtccagaagccgccaacgaggacgatccatggcatcccggggctttg
acgcaagtcctggagcgcacggagctgaacaagctgcccaagtctgtccagaacaaactt
gaaaagttccttgctgatcagcaatccgagatcgatggcctgaaggggcggcatgagaaa
tttaaggtggagagcgaacaacagtattttgaaatagaaaagaggttgtcccacagtcag
gagagacttgtgaatgaaacccgagagtgtcaaagcttgcggcttgagctagagaaactc
aacaatcaactgaaggcactaactgagaaaaacaaagaacttgaaattgctcaggatcgc
aatattgccattcagtatcgagaaaaacgcttggagcaagaaaaggaattgctacatagt
cagaatacatggctgaatacagagttgaaaaccaaaactgatgaacttctggctcttgga
agagaaaaagggaatgagattctagagcttaaatgtaatcttgaaaataaaaaagaagag
gtttctagactggaagaacaaatgaatggcttaaaaacatcaaatgaacatcttcaaaag
catgtggaggatctgttgaccaaattaaaagaggccaaggaacaacaggccagtatggaa
gagaaattccacaatgaattaaatgcccacataaaactttctaatttgtacaagagtgcc
gctgatgactcagaagcaaagagcaatgaactaacccgggcagtagaggaactacacaaa
cttttgaaagaagctggtgaagccaacaaagcaatacaagatcatcttctagaggtggag
caatccaaagatcaaatggaaaaagaaatgcttgagaaaatagggagattggagaaggaa
ttagagaatgcaaatgaccttctttctgccacaaaacgtaaaggagccatattgtctgaa
gaagagcttgccgccatgtctcctactgcagcagctgtagctaagatagtgaaacctggg
atgaaactaactgagctctataatgcttatgtggaaactcaggatcagttgcttttggag
aaactagagaacaaaagaattaataagtacctagatgaaatagtgaaagaagtggaagcc
aaagcaccaattttgaaacgccagcgtgaggaatatgaacgtgcacagaaagctgtagca
agtttatctgttaagcttgaacaagctatgaaggagattcagcgattgcaggaggacact
gataaagccaacaagcaatcatctgtacttgagagagataatcgaagaatggaaatacaa
gtaaaagatctttcacaacagattagagtgcttttgatggaacttgaagaagcaaggggt
aaccacgtaattcgtgatgaggaagtaagctctgctgatataagtagttcatctgaggta
atatcacagcatctagtatcttacagaaatattgaagagcttcaacaacaaaatcaacgt
ctcttagtggcccttagagagcttggggaaaccagagaaagagaagaacaagaaacaact
tcatccaaaatcactgagcttcagctcaaacttgagagtgcccttactgaactagaacaa
ctccgcaaatcacgacagcatcaaatgcagcttgttgattccatagttcgtcagcgtgat
atgtaccgtattttattgtcacaaacaacaggagttgccattccattacatgcttcaagc
ttagatgatgtttctcttgcatcaactccaaaacgtccaagtacatcacagactgtttcc
actcctgctccagtacctgttattgaatcaacagaggctatagaggctaaggctgccctt
aaacaggaaatttttgagaactacaaaaaagaaaaagcagaaaatgaaaaaatacaaaat
gagcagcttgagaaacttcaagaacaagttacagatttgcgatcacaaaataccaaaatt
tctacccagctagattttgcttctaaacgttatgaaatgctgcaagataatgttgaagga
tatcgtcgagaaataacatcacttcatgagagaaatcagaaactcactgccacaactcaa
aagcaagaacagattatcaatacgatgactcaagatttgagaggagcaaatgagaagcta
gctgtcgcagaagtaagagcagaaaatttgaagaaggaaaaggaaatgcttaaattgtct
gaagttcgtctttctcagcaaagagagtctttgttagctgaacaaagggggcaaaactta
ctgctaactaatctgcaaacaattcagggaatactggagcgatctgaaacagaaaccaaa
caaaggcttagtagccagatagaaaaactggaacatgagatctctcatctaaagaagaag
ttggaaaatgaggtggaacaaaggcatacacttactagaaatctagatgttcaactttta
gatacaaagagacaactggatacagagacaaatcttcatcttaacacaaaagaactatta
aaaaatgctcaaaaagaaattgccacattgaaacagcacctcagtaatatggaagtccaa
gttgcttctcagtcttcacagagaactggtaaaggtcagcctagcaacaaagaagatgtg
gatgatcttgtgagtcagctaagacagacagaagagcaggtgaatgacttaaaggagaga
ctcaaaacaagtacgagcaatgtggaacaatatcaagcaatggttactagtttagaagaa
tccctgaacaaggaaaaacaggtgacagaagaagtgcgtaagaatattgaagttcgttta
aaagagtcagctgaatttcagacacagttggaaaagaagttgatggaagtagagaaggaa
aaacaagaacttcaggatgataaaagaagagccatagagagcatggaacaacagttatct
gaattgaagaaaacactttctagtgttcagaatgaagtacaagaagctcttcagagagca
agcacagctttaagtaatgagcagcaagccagacgtgactgtcaggaacaagctaaaata
gctgtggaagctcagaataagtatgagagagaattgatgctgcatgctgctgatgttgaa
gctctacaagctgcgaaggagcaggtttcaaaaatggcatcagtccgtcagcatttggaa
gaaacaacacagaaagcagaatcacagttgttggagtgtaaagcatcttgggaggaaaga
gagagaatgttaaag

>gi568815597r:186343982_186546482|GENSCAN_predicted_peptide_2|335_aa
MGRTYIVEETVGQYLSNINLQGKAFVSGLLIGQCSSQKDYVILATRTPPKEEQSENLKHP
KAKLDNLDEEWATEHACQVSRMLPGGLLVLGVFIITTLELANDFQNALRRSSARPADWKY
QSGLSSSWLSLECTVHINIHIPLSATSVSYTLEKNTKNGLTRWAKEIENGVYLINGQVKD
EDCDLLEGQLLNSDHRSTATVQICSGSVNLKGAVKCRAYIHSSKPKVKDAVQDNYSNNIL
VDLRYQDKRIHYSEKEFHVLPYRVFVPLPGSTVMLCDYKFDDESAEEIRDHFMEMLDHTI
QIEDLEIAEETNTGVIAAFTVAVLAAGISFHYFSD

>gi568815597r:186343982_186546482|GENSCAN_predicted_CDS_2|1008_bp
atgggaagaacctacattgtagaagagactgttggccagtatctttcaaacataaatctc
caaggaaaggcttttgtctctggccttttaataggacagtgttcgtcacaaaaggattat
gtgattcttgccactagaacgccacccaaagaggagcaaagtgagaacctcaaacatccc
aaagctaagttggataacttggatgaagaatgggccacagaacatgcctgccaggtatcc
agaatgctaccagggggacttttagttcttggagtatttattattactactttagaactg
gcaaatgattttcaaaatgccctgcgtagaagttcagcaagaccagcagattggaagtat
caaagtggattatcatcctcatggctttctttagagtgtacagttcacattaatattcac
atcccactttctgctacttctgtcagctatactctggagaaaaatacaaagaatggactt
acacgctgggccaaggaaatagaaaatggtgtttatttgattaatggacaagttaaagat
gaagattgtgacctattagaaggacagctcctgaattcagaccacagatccacagccaca
gtccagatatgtagcggttctgtaaaccttaagggtgctgtgaaatgcagagcttatatc
cacagcagtaaacccaaagttaaagatgctgtgcaggataattattccaacaacatatta
gttgatcttaggtatcaagataaaagaatacattattctgaaaaagagttccacgtcctc
ccttatcgagtctttgttccccttcctggatccactgtaatgttgtgtgattataaattt
gacgatgagtcagctgaagaaatcagggaccattttatggagatgttggatcacacaatt
caaatagaagatttggaaattgcagaggaaacaaacacaggtgtgattgcagcatttaca
gttgcagtccttgctgcgggtatctcctttcattacttcagtgattag

>gi568815597r:186343982_186546482|GENSCAN_predicted_peptide_3|135_aa
MNEELFLKDEQIKWLLEIEPTPGKDAVNTVEMTTKDSECHTNLVEKEAIGFEGTDSNSES
FTVGKMLSNGITCYRKIFHEKKSQLMWQMSLSFKKLPWPPQPSATTTLISQQPSTSRQKP
STIKKIMTEGYEDYD

>gi568815597r:186343982_186546482|GENSCAN_predicted_CDS_3|408_bp
atgaatgaggagttgtttcttaaggatgagcaaataaagtggcttctggagatagaacct
actcctggcaaagatgctgtgaacactgttgaaatgacaacaaaggattcagaatgtcac
acaaacttagttgaaaaagaagccatagggtttgaggggactgactccaattctgaaagt
tttactgtgggtaaaatgctatcaaatggcatcacctgctacagaaaaatctttcatgaa
aagaagagtcaattgatgtggcaaatgtcattgtctttcaagaaattgccatggccaccc
caaccttcagcaaccaccaccctaatcagtcaacagccatcaacatcaagacaaaaacct
tccaccatcaaaaagattatgactgaaggttatgaagattatgactga

>gi568815597r:186343982_186546482|GENSCAN_predicted_peptide_4|273_aa
MSGPKGVINDWRKFKLESQDSDSIPPSKKEILRQMSSPQSRNGKDSKERVSRKMSIQEYE
LIHKEKEDENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGKQFLETIEKELKITTIVV
HIYEDGIKGCDALNSSLTCLAAEYPIVKFCKIKASNTGAGDRFSLDVLPTLLIYKGGELI
SNFISVAEQFAEEFFAGDVESFLNEYGLLPERETLKSYVSIAGREERRKQMVWQWRGRRS
AIVLDFGETKVEPFIVRIQLKARGQENPVDEVC

>gi568815597r:186343982_186546482|GENSCAN_predicted_CDS_4|822_bp
atgtcaggacccaaaggagtaataaatgattggagaaagtttaaattagagagtcaagac
agtgattcaattccacctagcaagaaggagattctcaggcaaatgtcttctcctcagagt
aggaatggcaaagattcaaaggaacgagtcagcagaaagatgagcattcaagaatatgaa
ctaatccataaagagaaagaggatgaaaactgccttcgtaaataccgtagacagtgtatg
caggatatgcaccagaagctgagttttgggcctagatatgggtttgtgtatgagctggaa
actggaaagcaattcctagaaacaattgaaaaggaactgaagatcaccacaattgttgtt
cacatttatgaagatggtattaagggttgtgatgctctaaacagtagtttaacatgcctt
gcagcagaataccctatagttaagttttgtaaaataaaagcttcgaatacaggtgctggg
gaccgcttttccttagatgtacttcctacactgctcatctataaaggtggggaactcata
agcaattttattagtgttgctgaacagtttgctgaagaattttttgctggggatgtggag
tctttcctaaatgaatatgggttactacctgaaagagagactctaaaatcctatgtctca
attgcaggaagggaagaaaggaggaagcaaatggtgtggcagtggaggggaagaaggtct
gcgattgtactagattttggtgaaacaaaagtggaacctttcattgtcagaatccagctg
aaagccagaggacaagagaaccctgttgatgaagtctgttaa

>gi568815597r:186343982_186546482|GENSCAN_predicted_peptide_5|60_aa
MKNDTEMELEVEETIWLVGSSALHHPYCRTQPGAAVTIWGIAGHCGKGKERKCEELCTGS

>gi568815597r:186343982_186546482|GENSCAN_predicted_CDS_5|183_bp
atgaaaaatgacactgaaatggagctagaggtagaggaaacaatatggttggttggcagt
tctgctctgcatcatccttactgcaggacccagcctggtgcagcagtgactatctggggc
attgctggtcattgtggcaaagggaaagaaaggaagtgtgaggaattgtgcactggctct
taa

>gi568815597r:186343982_186546482|GENSCAN_predicted_peptide_6|155_aa
MRDCAMRNGAPGPKYYAFPVVFANRRPGDSLSTLGERVAVGRASADLSIPACWLCAVDLP
AQRSSSAKGQTASSSGSLTTLSPDWETSPSRGQQTPHIGELWLASGGCPSGINLPEEGTG
SNLCCSGAFTGDTQANRAWSGPRGNSSRPATQGPD

>gi568815597r:186343982_186546482|GENSCAN_predicted_CDS_6|468_bp
atgagggactgtgccatgaggaacggtgcacccgggcccaaatactatgcttttcccgtg
gtctttgcaaaccgcagaccaggagattccctcagcaccctgggggaaagggtggctgtg
ggcagagcttcagcagacttaagcattcctgcctgctggctctgtgcagtggatctccca
gcacagcgttcgagctctgctaagggtcagactgcctcctcaagtgggtccctgaccacc
ttgtctcctgactgggagacatctcccagcaggggtcaacagacacctcatataggagag
ctctggctggcatctggtgggtgcccctctgggataaatcttccagaggaaggaacaggc
agcaatctttgctgttctggagccttcactggtgatacccaggcaaacagggcctggagt
ggacctcgaggaaactccagcagacccgcaacacaggggcctgactga

>gi568815597r:186343982_186546482|GENSCAN_predicted_peptide_7|235_aa
MWKRLWNWVTGRDWKNLEGSEEDRKMQESLELPRDLLTGFDKNADSDMDNEVQAEVVSDG
DAKLAGNWNKGHHAAQAIASEGKSPKPWQLTHGVGPIGAQKLRIEVWEPQPGFQRMYKNT
YMSSSFAFAEEGFTSDYVIHFRLVPAVTTGWPEHRPVYPGFSPPFRTENIAWGPGDCPIQ
ATTSGISALLVEPAVGPKLPAATTSAGTYLQVPSLGLDIGLSSPSQPLPISRHTA

>gi568815597r:186343982_186546482|GENSCAN_predicted_CDS_7|708_bp
atgtggaagcgactttggaactgggtaacaggcagagattggaaaaatttggagggctca
gaagaagacaggaaaatgcaggaaagtttggaacttcctagagacttgttgactggcttt
gacaaaaatgctgatagtgatatggacaatgaagtccaggctgaggtggtctcagatgga
gatgcaaaacttgctgggaactggaataaaggccaccatgctgctcaggccattgcttca
gagggtaaaagccccaagccttggcagcttacacatggtgttgggcctattggtgcacag
aagttaagaattgaggtttgggaacctcaacctggatttcagaggatgtataaaaatacc
tatatgtccagctcctttgcatttgctgaggagggttttacttccgattatgtgatccat
tttagactggtgcctgctgtcaccactgggtggcctgagcacaggcctgtctaccctggt
ttcagccctcccttcaggacagagaacatagcttggggtcctggagattgcccaattcaa
gctaccacttcgggcatctcagcactccttgtggagcctgcggttggacctaaactccca
gctgctaccacttcagctggcacctacctgcaagtgccatctttaggcttggatattggc
ctgtctagtccatcgcagccactaccaatatcaaggcacactgcttga