GENSCAN 1.0	Date run:  3-Nov-116	Time: 01:30:40

Sequence gi568815576r:35507300_35717257 : 209958 bp : 48.17% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12673  12767   95  0  2   79  109    11 0.170   2.15
 1.02 Intr +  15665  15778  114  2  0   79  115    37 0.366   5.06
 1.03 Term +  19733  19859  127  2  1   77   46    79 0.230   0.36
 1.04 PlyA +  24165  24170    6                               1.05

 2.05 PlyA -  24715  24710    6                               1.05
 2.04 Term -  26758  26112  647  2  2   94   43  1937 0.999 184.09
 2.03 Intr -  33372  33319   54  1  0  130   33    27 0.498   0.35
 2.02 Intr -  33608  33521   88  2  1   79   -4    94 0.894  -1.16
 2.01 Init -  33994  33821  174  1  0   63   75   158 0.676   9.35
 2.00 Prom -  34511  34472   40                              -6.96

 3.00 Prom +  34567  34606   40                             -15.08
 3.01 Init +  34929  35069  141  2  0   93   40    73 0.620   3.22
 3.02 Intr +  39502  39781  280  0  1  122   94   503 0.928  51.35
 3.03 Term +  44204  44733  530  0  2  116   53  1142 0.951 107.92
 3.04 PlyA +  46678  46683    6                               1.05

 4.00 Prom +  56678  56717   40                              -0.66
 4.01 Init +  81555  81645   91  2  1   92  113    63 0.816   9.85
 4.02 Term +  86660  86736   77  0  2   46   44   108 0.537   0.20
 4.03 PlyA +  88009  88014    6                               1.05

 5.10 PlyA -  89900  89895    6                               1.05
 5.09 Term - 100144  99998  147  1  0  108   47   275 0.998  23.30
 5.08 Intr - 103807 103585  223  0  1  110   75   322 0.644  31.23
 5.07 Intr - 109966 109864  103  2  1  100   98   115 0.402  12.93
 5.06 Intr - 115234 115136   99  2  0   94   68    23 0.143   0.98
 5.05 Intr - 120360 120277   84  1  0   60   28   118 0.074   2.79
 5.04 Intr - 127782 127656  127  0  1   92   68    27 0.322   1.35
 5.03 Intr - 136008 135903  106  2  1  110   63    16 0.013   1.52
 5.02 Intr - 140958 140910   49  1  1   87   77    28 0.043  -0.66
 5.01 Init - 144459 144327  133  0  1   78   47    69 0.359   2.10
 5.00 Prom - 144583 144544   40                              -0.26

 6.02 PlyA - 144867 144862    6                              -0.45
 6.01 Sngl - 146032 145094  939  1  0   58   43   327 0.504  21.71
 6.00 Prom - 147250 147211   40                              -5.16

 7.00 Prom + 148163 148202   40                              -3.66
 7.01 Init + 148490 148641  152  1  2   69  106    16 0.892   1.02
 7.02 Intr + 151316 152150  835  2  1   76   59   749 0.961  62.20
 7.03 Term + 184731 184901  171  2  0   86   34   107 0.182   2.93
 7.04 PlyA + 184915 184920    6                               1.05

 8.00 Prom + 186467 186506   40                              -4.76
 8.01 Init + 187953 188013   61  2  1   71   85    32 0.875   2.55
 8.02 Intr + 189148 189315  168  2  0   92   97    77 0.926   8.92
 8.03 Intr + 190417 190590  174  2  0   84   93    76 0.865   7.61
 8.04 Term + 190661 190872  212  0  2  -14   49   191 0.577   2.46
 8.05 PlyA + 191357 191362    6                               1.05

 9.04 PlyA - 191507 191502    6                              -1.75
 9.03 Term - 192292 192218   75  1  0   56   48    85 0.631  -0.86
 9.02 Intr - 194961 194836  126  0  0   44   84   159 0.991  11.98
 9.01 Intr - 196677 196510  168  0  0   83   88   134 0.958  13.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 160618 160790  173  2  2   74   44   126 0.815   4.79


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_1|111_aa
MEVGKKKQPSSPDADTPMQRPSQLPERRVPSSFYSVLGPGNTKKMDTDTGGQGGTSWPSE
ALGLREDTGSAPQGPCTDRCESMYQNLLSQNTQGFGDQGPRVMSPDLRLLL

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_1|336_bp
atggaggtggggaaaaaaaaacagccttccagccccgacgccgacacccccatgcagcgc
ccctctcagctcccagaaaggagagttccttccagcttttactctgttctaggccctgga
aatacaaagaagatggacacagacactggtggacaagggggcacttcctggccttctgaa
gctttgggtctgagggaggacacaggcagtgctccccaagggccttgcacagaccgctgt
gaaagcatgtaccagaatctgttgtcacaaaatacgcagggttttggagaccagggacct
cgtgtcatgtctccggacctacggcttcttctgtaa

>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_2|320_aa
MGGLRGLGGARAGGGLRLAAAGPALPRAGGLLLSQVPGGLGTSDPGVPAWGSRAGGRELS
QRRRDGFFLPARRRQQLKEEQGALLCARRCPTVTRRAKRSLIPPKGLDCIPLSNVIITII
TITITIILIITIAFITIIITVIITIIITIITIITLIIIPVITIIIITITIITVIIIPIIT
IIIITIITIITVIIPIIAIVIITTITVIIFPIITIIIITITIITIITVIIIPIITIIIIT
VIITIITIIPIITIIIIITIIITTLTTITTIIIITITTIITIIITIITTIITITVSVIII
ATIIVVIIIISQAYGPFAPF

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_2|963_bp
atgggtgggctccgagggctcggcggggcccgggcagggggcgggctccggctcgccgcc
gccggccctgccctgccccgagccgggggcctcctgctgagccaggtgcccggaggcttg
gggacgtccgatccgggggtccccgcctggggctctcgggctgggggcagagagctctcc
cagcgccggagggacggcttctttctccccgcgcggcgacgccagcagctgaaggaggag
cagggcgctctgctctgcgcgcgcagatgccccactgtcacccgcagggcgaagaggtcg
ctgatccctccgaaaggcttggactgcatccctctttctaatgtcatcatcaccatcatt
accatcactatcaccatcatcctcatcatcaccattgccttcatcaccataatcatcacc
gtcatcatcaccatcatcatcaccatcatcaccatcatcactctcatcatcatccccgtc
atcaccatcatcatcatcaccatcaccatcatcactgtgatcatcatccccatcatcacc
atcatcatcatcaccatcatcacaatcatcactgtcatcatccccatcatcgctatcgtc
atcatcaccaccatcactgtcatcatcttccccatcatcactatcatcatcatcaccatc
accatcatcaccatcatcactgtcatcatcatccccatcatcaccatcatcatcatcact
gtcatcatcaccatcatcaccatcattcccatcatcaccatcatcatcattatcaccatt
atcatcaccacccttaccaccatcaccaccatcatcatcatcaccatcaccaccatcatc
actatcattattaccatcatcaccaccatcatcaccatcaccgtcagcgtcatcatcata
gccaccatcattgttgtcatcatcatcatctctcaagcctatggaccttttgctcctttt
tag

>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_3|316_aa
MGSLQDLRLHSSPASPGCSRQPHDCQDKVPRRKEPSMCSGLLRVKSWPRAMMKTLSSGNC
TLSVPAKNSYRMVVLGASRVGKSSIVSRFLNGRFEDQYTPTIEDFHRKVYNIRGDMYQLD
ILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRESFDEVKRLQKQILEVKSCLKNKTKEA
AELPMVICGNKNDHGELCRQVPTTEAELLVSGDENCAYFEVSAKKNTNVDEMFYVLFSMA
KLPHEMSPALHRKISVQYGDAFHPRPFCMRRVKEMDAYGMVSPFARRPSVNSDLKYIKAK
VLREGQARERDKCTIQ

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_3|951_bp
atggggtccctgcaagacctgcgcctgcattccagtccagcctcaccaggctgctctagg
cagccccacgactgccaagataaagtgccacgaagaaaagaacccagcatgtgttcaggt
ttgctgcgggtcaagagctggccccgagccatgatgaagactttgtccagcgggaactgc
acgctcagtgtgcccgccaaaaactcataccgcatggtggtgctgggtgcctctcgggtg
ggcaagagctccatcgtgtctcgcttcctcaatggccgctttgaggaccagtacacaccc
accatcgaggacttccaccgtaaggtatacaacatccgcggcgacatgtaccagctcgac
atcctggatacctctggcaaccaccccttccccgccatgcgcaggctgtccatcctcaca
ggggatgtcttcatcctggtgttcagcctggataaccgggagtccttcgatgaggtcaag
cgccttcagaagcagatcctggaggtcaagtcctgcctgaagaacaagaccaaggaggcg
gcggagctgcccatggtcatctgtggcaacaagaacgaccacggcgagctgtgccgccag
gtgcccaccaccgaggccgagctgctggtgtcgggcgacgagaactgcgcctacttcgag
gtgtcggccaagaagaacaccaacgtggacgagatgttctacgtgctcttcagcatggcc
aagctgccacacgagatgagccccgccctgcatcgcaagatctccgtgcagtacggtgac
gccttccaccccaggcccttctgcatgcgccgcgtcaaggagatggacgcctatggcatg
gtctcgcccttcgcccgccgccccagcgtcaacagtgacctcaagtacatcaaggccaag
gtccttcgggaaggccaggcccgtgagagggacaagtgcaccatccagtga

>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_4|55_aa
MGKVRVNPEDKGGHSVGVQSQGAGEGCQKQASSLGKTNLSYVTTKGSRNSGIQTL

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_4|168_bp
atgggcaaggtgagggtgaatcctgaagacaaaggtggccactcggtgggtgttcagagc
cagggagcaggtgaaggttgtcagaaacaagcttcctcacttggaaaaacaaatctgagc
tacgtgaccaccaagggctcccggaactctggcattcagaccctgtga

>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_5|356_aa
MEYYAAIKKDEFVSFVGTWMKLETIILSKLSQGQKTKHRMFSLLGWTYMGYENSSCGLEL
WWAFSITERREFQVYYNSCPSSSWIGDARAFSPPDPTGLYPIYSQDTQTFRLWLNYNTDF
PGSPACKWQAMELLSPQSPFRVDRGEHLPFLVKGARYTLVPAGQEGALAAWLEALRGQLG
RRGAVVSMMDAEGLERSSPDCAMGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHP
ETLEKFDKFKHLKSEDEMKASEDLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKH
KIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFRKDMASNYKELGFQG

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_5|1071_bp
atggaatactatgcagccataaaaaaggatgagttcgtgtcctttgtagggacatggatg
aagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcctaggatggacctatatggggtatgaaaatagctcctgtggcttagagcta
tggtgggctttttccataacagaaagaagagaatttcaagtctattacaattcatgtcct
tctagttcctggattggagatgcaagagcattttccccaccagatccaactgggctttac
cccatctactcccaggatactcagaccttcagactctggctgaattataacactgacttt
cctgggtctccagcttgcaaatggcaggctatggaacttctcagcccacaatcacccttc
agggtagaccgaggagagcacctccccttcctggtgaagggagcccgatacacgctggtg
ccggctggccaagaaggagccctggccgcttggctggaggctctgcgaggacagctgggg
agaaggggagctgtggtcagtatgatggatgctgaggggctggagaggagcagccctgac
tgcgccatggggctcagcgacggggaatggcagttggtgctgaacgtctgggggaaggtg
gaggctgacatcccaggccatgggcaggaagtcctcatcaggctctttaagggtcaccca
gagactctggagaagtttgacaagttcaagcacctgaagtcagaggacgagatgaaggcg
tctgaggacttaaagaagcatggtgccaccgtgctcaccgccctgggtggcatccttaag
aagaaggggcatcatgaggcagagattaagcccctggcacagtcgcatgccaccaagcac
aagatccccgtgaagtacctggagttcatctcggaatgcatcatccaggttctgcagagc
aagcatcccggggactttggtgctgatgcccagggggccatgaacaaggccctggagctg
ttccggaaggacatggcctccaactacaaggagctgggcttccagggctag

>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_6|312_aa
MIVYLENPIVSAQNLLKLIGNFSKVSGYKINVQKSQAFLHTNNRQTESQIMSELPFTIAS
KRIKYLGIQLTRDVKDFFKENYKPLLNETKEDTNKWKNIPCSWVGRINIMKMAILPKVIY
RFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGDITLPDFKLYYKATV
TKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKKWGNDSLFNKWCWENWLAT
RRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNIIQDIGMGKDFMSKTPKATA
TKAKIDKGISLN

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_6|939_bp
atgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataggc
aacttcagcaaagtctcgggatacaaaatcaatgtgcaaaaatcacaagcattcttacac
accaataacagacaaacagagagccaaatcatgagtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaaggacttcttcaaggag
aactacaaaccactgctcaatgaaacaaaagaggatacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttat
agattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcccacattgccaagtcaatcctaagccaa
aagaacaaagctggagacatcacgctacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagaccaatggaacagaacagag
ccctcagaaataatgccgcatatctacaactatctgatctttgacaaacctgacaaaaac
aagaaatggggaaatgattccctgtttaataaatggtgctgggaaaactggctagccaca
cgcagaaagctgaaactggatcccttccttacaccttatacaaaaattaattcaagatgg
attaaagacttaaatgttagacctaaaaccataaaaaccctagaagaaaacctaggcaat
atcattcaggacataggcatgggcaaggacttcatgtctaaaacaccaaaagcaacggca
acaaaagccaaaattgacaaagggatctcattaaactaa

>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_7|385_aa
MGEIQGLNNSQRGSFEFQLQYISNNEQYIFREVARQWKRVLSLQQEQLVGKDEDDAPLCE
DVELQDGDLSPEEKIFLREFPRLKEDLKGNIDKLRALADDIDKTHKKFTKANMVATSTAV
ISGVMSLLGLALAPATGGGSLLLSTAGQGLATAAGVTSIVSGTLERSKNKEAQARAEDIL
PTYDQEDREDEEEKADYVTAAGKIIYNLRNTLKYAKKNVRAFWKLRANPRLANATKRLLT
TGQVSSRSRVQVQKAFAGTTLAMTKNARVLGGVMSAFSLGYDLATLSKEWKHLKEGARTK
FAEELRAKALELERKLTELTQLYKSLQQKDIRNKMTEGMYTHCDIFNNVILYPLAIRKNI
IERCTLSVISGVISSPDIRKSYINY

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_7|1158_bp
atgggagagatccagggattaaataattctcaaagaggtagctttgaattccagcttcaa
tacatctccaacaatgaacagtacatttttagagaagtagcaagacaatggaaaagggtt
ttgagtctccagcaggagcaacttgtgggaaaggatgaggatgacgctcctctgtgtgaa
gacgtggagctacaagacggagatctgtcccccgaagaaaaaatatttttgagagaattt
cccagattgaaagaagatctgaaagggaacattgacaagctccgtgccctcgcagacgat
attgacaaaacccacaagaaattcaccaaggctaacatggtggccacctctactgctgtc
atctctggagtgatgagcctcctgggtttagcccttgccccagcaacaggaggaggaagc
ctgctgctctccaccgctggtcaaggtttggcaacagcagctggggtcaccagcatcgtg
agtggtacgttggaacgctccaaaaataaagaagcccaagcacgggcggaagacatactg
cccacctacgaccaagaggacagggaggatgaggaagagaaggcagactatgtcacagct
gctggaaagattatctataatcttagaaacaccttgaagtatgccaagaaaaacgtccgt
gcattttggaaactcagagccaacccacgcttggccaatgctaccaagcgtcttctgacc
actggccaagtctcctcccggagccgcgtgcaggtgcaaaaggcctttgcgggaacaaca
ctggcgatgaccaaaaatgctcgcgtgctgggaggtgtgatgtccgccttctcccttggc
tatgacttggccactctctcaaaggaatggaagcacctgaaggaaggagcaaggacaaag
tttgcggaagagttgagagccaaggccttggagctggagaggaaactcacagaactcacc
cagctctacaagagcttgcagcagaaagatattaggaacaagatgaccgaagggatgtac
acccactgcgatattttcaataatgtcatcctctaccccctggctattaggaagaacatc
atagagcggtgtacactttctgtgatatcgggagtaatatcctctccagatatcaggaaa
agttatattaattattaa

>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_8|204_aa
MGVLRARGGEGLAVTPRIAGGGVRLPVILFLISRDGEHDISFHIAVGVHSPGDTDPNIQQ
VEYDMTANIAMNVQPPDIRNYVTGDCTLLAILGVISSSPIMDIKKNITREVYTPCDMESN
SMLSLWDIRNNITEGGCTPPAILGVISFSPPRDIRNNITVGVYTPCDIATSIIVSLPAYK
EQYHKGVYTPCDIGDNIFLSPAGY

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_8|615_bp
atgggggtcctaagagcaagggggggagaggggctggctgttactccccgcatcgcagga
gggggtgtacgcctacctgtgatattgttcctaatatccagggacggagagcatgatatt
agttttcatatcgcagtaggtgtacactcacccggtgacaccgatcctaatatccagcag
gtagagtatgacatgactgccaacatagcaatgaatgtacagccacccgatattaggaac
tatgtcacaggagactgtacacttcttgcgatattgggagtaatatcatcctctcccatc
atggatattaagaagaatattacaagggaggtgtacaccccctgcgatatggagagtaat
agtatgctctccctttgggatattaggaacaatatcacagaaggaggatgtacaccccct
gcgatattgggagtaatatcattttctccccctcgggatattcggaacaatatcacagtg
ggtgtgtacaccccctgcgatattgccactagtatcatcgtctccctgccagcatataag
gaacagtatcacaagggggtgtacaccccctgcgatattggggataatatcttcctctcc
cccgctggctattag

>gi568815576r:35507300_35717257|GENSCAN_predicted_peptide_9|122_aa
VEGNELLLMTVGQWTIGAQLLYEMAVPGTPVSRHSAVEGPVGAATQGSEDGEGESTWVYT
APNPGVVFLISKWEEDDIADNIEGGVHLFCDMVPDIQGEQYHTGLYTFCDIGSDINLSAF
GY

>gi568815576r:35507300_35717257|GENSCAN_predicted_CDS_9|369_bp
gttgaggggaacgagttgctcttaatgactgttgggcagtggaccataggagcccaactg
ctctatgaaatggctgttcctgggacacctgtgagcagacacagtgccgtggaagggcca
gttggtgcagccacccagggctcagaggatggtgaaggtgaatccacgtgggtgtacacc
gcccccaaccccggggtagtgttcctaatatccaagtgggaagaggatgacattgctgac
aatatcgaagggggtgtacacctcttctgtgatatggttcctgatatccagggggaacag
tatcacacggggctgtacactttctgcgatattgggagtgatatcaacctctcggccttt
ggatattaa