GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:52:34

Sequence gi568815593r:90418822_90625289 : 206468 bp : 37.54% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +  25191  25898  708  2  0   86   49   149 0.826   6.78
 1.02 PlyA +  27153  27158    6                               1.05

 2.03 PlyA -  29449  29444    6                               1.05
 2.02 Term -  42731  42346  386  0  2   84   35   296 0.778  17.97
 2.01 Init -  49788  49770   19  0  1   56   94    11 0.221  -1.26
 2.00 Prom -  50842  50803   40                              -4.55

 3.05 PlyA -  51121  51116    6                               1.05
 3.04 Term -  55735  54872  864  1  0  -19   48   546 0.241  31.61
 3.03 Intr -  56009  55886  124  1  1   69   43   102 0.215   3.47
 3.02 Intr -  56222  56135   88  0  1   54   28   106 0.361  -0.69
 3.01 Init -  58049  57974   76  2  1   98   78    76 0.580   8.90
 3.00 Prom -  60107  60068   40                              -9.55

 4.00 Prom +  60330  60369   40                              -8.35
 4.01 Init +  66747  66863  117  2  0   39   95    98 0.932   5.85
 4.02 Intr +  69179  69308  130  1  1   51   79   112 0.996   5.95
 4.03 Intr +  73236  73349  114  1  0   27   74   102 0.430   2.20
 4.04 Intr +  76856  76912   57  0  0  127   93    27 0.656   5.04
 4.05 Intr +  83088  83167   80  1  2   37   94    55 0.636  -0.65
 4.06 Intr +  87707  87853  147  1  0   31   80   334 0.934  26.41
 4.07 Term +  93232  93318   87  0  0   16   48   100 0.201  -4.52
 4.08 PlyA +  94980  94985    6                               1.05

 5.06 PlyA -  95055  95050    6                               1.05
 5.05 Term - 100663  99998  666  1  0  134   43   442 0.999  37.14
 5.04 Intr - 106479 106214  266  1  2  104  127   199 0.585  21.71
 5.03 Intr - 110800 110627  174  2  0   42  103   193 0.962  15.19
 5.02 Intr - 111210 111080  131  2  2   40   50    95 0.134   0.32
 5.01 Init - 116496 116456   41  0  2   54   77    70 0.198   2.21
 5.00 Prom - 134991 134952   40                              -2.35

 6.00 Prom + 139019 139058   40                              -2.75
 6.01 Init + 139755 139858  104  2  2   64   99    95 0.324   8.04
 6.02 Intr + 139975 140096  122  1  2   12   96    55 0.075  -2.08
 6.03 Intr + 156762 157099  338  1  2   93   88   132 0.012   8.01
 6.04 Intr + 162371 162479  109  1  1   39   81    41 0.000  -2.56
 6.05 Intr + 165720 165815   96  1  0   76   58    67 0.000   1.56
 6.06 Intr + 196014 196198  185  1  2  106  103   109 0.750  12.79
 6.07 Intr + 198983 199132  150  1  0   36  111   117 0.996   8.24
 6.08 Intr + 203776 203880  105  0  0   93  107    65 0.993   8.39
 6.09 Intr + 206309 206422  114  1  0  116   36   109 0.718   8.22

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:90418822_90625289|GENSCAN_predicted_peptide_1|235_aa
MAILPKVIYRFNAIPIKLPKTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPD
FKLYYKATVTKTARYWYQNRDIDQWNRTEPSEITPRTYNYLIFDKPEKNKQWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFATYSYIKVY

>gi568815593r:90418822_90625289|GENSCAN_predicted_CDS_1|708_bp
atggccatactgcccaaggtaatctacagattcaatgccatccccatcaagctaccaaag
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcacggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataacgccgcgtacctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagatttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atgtccaaaacaccaaaagcaatggcaaccaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
acatgggagaaaatttttgcaacctactcatatataaaagtatactga

>gi568815593r:90418822_90625289|GENSCAN_predicted_peptide_2|134_aa
MIQDMKGDVINLGDRQLTVMHMPGHSRGSICLHDKDRKILFSGDVVYDGSLIDWLPYSRI
SDYVGTCERLIELVDRGLVEKVLPGHFNTFGAERLFRLASNYISKAGICHKVSTFAMRSL
ASLALRVTNSRTSP

>gi568815593r:90418822_90625289|GENSCAN_predicted_CDS_2|405_bp
atgatacaagatatgaaaggggatgtgatcaaccttggtgacagacagctcactgttatg
cacatgccaggtcactccaggggcagtatttgcttacatgacaaagaccgaaagattctc
ttcagtggagacgtcgtgtatgatggatcactgattgactggctcccatacagcaggata
agtgactatgttggaacttgtgaacgtctaatagaattagtggacagaggtctggtagag
aaggtgcttcctgggcacttcaatacctttggtgctgaaaggctttttcgattggcttct
aactatatttcaaaagctgggatatgtcacaaagtttctacttttgccatgcgatctctt
gcaagtttagctctacgtgtaacaaattctaggacctcgccctag

>gi568815593r:90418822_90625289|GENSCAN_predicted_peptide_3|383_aa
MDAIVERVAEEVLSYLVIPEHKPDKIFDCFLGYLLPKSRSVGKTLQPKCRPARKGKAPPP
RQRGFFALGRRRSRRTTREAPHFLRQLGVRALQSQWLLRPRAGGAASACCRPGGRVRERT
LRAASVCVLPPPIPTPASHAPASLYASSLAAGRPLHTAAVPCVWTACGRLARPHSPRLAA
PLPSMSALEWYAHKSLGDGIFWIQERFYESGNRANIWLVRGSEQDVVIDTGLGLRSLPEY
LYSSGLLQDREAKEDAARRPLLAVATHVHFDHSGGLYQFDRVAVHHAEAEALARGDNFET
VTWLSDSEVVRTPSPGWRARQFRVQAVQPTLILQDGNGPPRARALVKGGYWEETVRVPHV
ADLRGHKGDYFGTSQSHFCFTLP

>gi568815593r:90418822_90625289|GENSCAN_predicted_CDS_3|1152_bp
atggatgctattgtggaaagggtggctgaagaagtcctctcttacttggtgatacctgag
cataagcctgacaaaatcttcgattgcttcctcggttacctgctccctaagtctcgaagc
gtgggcaaaactctgcagccgaagtgccggccggcaaggaaagggaaggccccaccccct
cggcaaagaggtttttttgcccttggcaggcgccgtagtcgccgtacaacccgcgaggcc
ccacactttctgcgccagctgggagtgcgcgccctgcagagccagtggctcctgcgcccc
cgtgctggtggcgcagcctctgcttgctgccgacctggcggaagggtgcgggagcgcacg
ctacgggcagcgtcggtctgcgtccttcctcctcctattccgacccccgcatcccacgcc
cccgcctcgctctacgcctcctccctggctgcaggcagaccgcttcacacagccgcagtg
ccctgtgtgtggacagcctgtgggagactcgcacgcccacactcaccccgcctggctgca
cccctgcccagcatgtcggcgctcgagtggtacgcccacaagtctctaggcgatggtatc
ttctggattcaagaacgtttctacgagtcgggcaaccgtgccaacatctggctggtgcgc
ggctccgagcaggacgtggtgatcgatacaggcctggggctgcgcagcctcccggagtac
ctgtactcctccggcctcttgcaggaccgagaggccaaagaggacgcggcgcgccggcca
ctgcttgccgtggccacccacgtgcacttcgaccactccggcggcctctaccagttcgac
cgcgtggcagtgcaccacgccgaggccgaggcgctggctcgcggggacaactttgagacc
gtgacctggctttccgatagcgaggtggtgcggacgcccagccccggctggagggccaga
cagttccgggtacaggcggtgcagcccaccctcatcctgcaggatggtaatgggcccccg
cgggcgcgcgctctcgttaagggagggtattgggaagagactgtccgagtgccgcatgtt
gcagacttgcgtggccataaaggggattattttggcacctcgcagagccacttctgtttc
acccttccctga

>gi568815593r:90418822_90625289|GENSCAN_predicted_peptide_4|243_aa
MAGNKGRGRAAYTFNIEAVGFSKGEKLPDVVLKPPPLFPDTDYKPVPLKTGEGEEYMLAL
KQELRETMKRMPYFIETPEERQEKHVPQFLDESEVKCKEIDSSLDAHDDDEIDCISKISD
YIERYSKRYMKVYKEEWIPGPKPKKAKDAGKGTPLTNTEDVLKKMEELEKRGDGEKSDEE
NEEKEGSKEKSKEGDDDDDDDAAEQEEYDEEEQEEENDYINSYFEDGDDFGADSDDNMDE
ATY

>gi568815593r:90418822_90625289|GENSCAN_predicted_CDS_4|732_bp
atggctgggaataaaggaagaggacgtgctgcttatacctttaatattgaggctgttgga
tttagcaaaggtgaaaagttacctgatgtagtgttgaaaccacccccactatttcctgat
acagattataaaccagtgccactgaaaacaggagaaggtgaagaatatatgctggctttg
aaacaggagttgagagaaacaatgaaaagaatgccttattttattgaaacacctgaagaa
agacaagaaaaacatgttccacaattcttagacgaatcagaagtcaaatgcaaagagata
gatagctctctggatgctcatgatgatgatgaaattgattgtataagcaaaatctcagac
tatattgaaaggtatagtaaaagatacatgaaggtatacaaggaagaatggataccaggc
ccaaaacccaaaaaggcaaaagacgcaggcaaaggcacaccactcactaatactgaagat
gtgttgaaaaaaatggaggaattggaaaaaagaggtgatggtgaaaaatcagatgaggaa
aatgaagagaaagaaggaagcaaagagaaaagtaaagaaggtgatgatgacgatgacgat
gatgccgcagaacaggaggaatatgatgaagaagagcaagaagaggaaaatgactacatt
aattcatactttgaagatggagatgattttggcgcagacagtgatgacaacatggatgag
gcaacctattag

>gi568815593r:90418822_90625289|GENSCAN_predicted_peptide_5|425_aa
MADIEKKVNKAHGRKFEMHSKKKMQDSSPTHPEPRLVLRVHPTVSASAVWTLDKDAASLR
TWRRRTARKAETLAAEAEADGVSPKQRLGHELTRDSGGGGPFGHLLAECSLLTGTDFNIM
AGRHQNRSFPLPGVQSSGQVHAFGNCSDSDILEEDAEVYELRSRGKEKVRRSTSRDRLDD
IIVLTKDIQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFSSLTETL
CPPKGRQTSRHSSVQYSSEQQEILPANDSLAYSDSAGSFLKEVDRDIEQIVKCTDNKREN
LNEVVSALTAQQMRFEPDNKNTQRKDPYYGADWGIGWWTAVVIMLIVGIITPVFYLLYYE
ILAKVDVSHHSTVDSSHLHSKITPPSQQREMENGIVPTKGIHFSQQDDHKLYSQDSQSPA
AQQET

>gi568815593r:90418822_90625289|GENSCAN_predicted_CDS_5|1278_bp
atggcagatattgagaaaaaggtgaacaaggctcatgggagaaaattcgagatgcacagc
aagaaaaaaatgcaagacagctccccgacacatcctgagccacgcctcgtcctcagggtg
cacccgacagtctctgccagcgcagtgtggacgctggacaaagacgcagccagtttgcgg
acgtggcggcggcgtacggcccggaaggcggagacgttggcggcagaggcggaggcggac
ggggtcagcccaaagcagaggctcggccatgaacttacccgggacagcggcggcggcgga
ccttttggccatcttctcgcagagtgctccctgctaacggggacagattttaacattatg
gcagggaggcatcagaatcgtagttttcctcttccaggagttcagtcaagtggtcaagta
catgcatttggaaattgttcagacagtgatattttggaggaggatgctgaagtgtatgaa
cttcgatccagaggaaaagagaaagtccgaagaagtacatcaagagatagacttgacgac
attatagtattaacaaaagatatacaagaaggagatacattaaatgcaatagcccttcag
tactgttgtacggtagcagatatcaagagagttaacaatctcatcagtgatcaagacttt
tttgcccttaggtctatcaaaattccagtaaaaaagttcagttccttgaccgaaacactt
tgtcctccaaaaggaagacagacttcacgtcattcatctgttcaatactcttccgaacaa
caggaaattttgccagctaatgattctcttgcttacagtgactcagctggtagcttttta
aaagaagtagaccgagacatagaacaaatagtaaagtgtacagacaataagagagagaac
ctcaatgaggtagtatcggccttaacagcacaacaaatgcgttttgaacctgataacaaa
aacactcaacgtaaagacccctattatggagcagactggggaatagggtggtggacagct
gtagtgataatgttgatagtaggtataataacaccagtgttttatttgttgtattatgaa
attttagctaaggtggatgttagtcatcattcaacagtggactcttcacatttacattca
aaaatcacacccccatcacagcagagagaaatggaaaatggaattgtgccaactaaagga
atacatttcagccaacaagatgatcataaactgtatagtcaagattctcagtcacctgct
gctcaacaggaaacatag

>gi568815593r:90418822_90625289|GENSCAN_predicted_peptide_6|441_aa
MAKAGCSRRQSADLAARCGEQSAQPGAATPAPLVSGSKNQQRGQGVRTGVRGRARVCGGP
AGTAGSARMSVFLGPGVSPPMNGQRKLHPRPILSPRWLWGPALPQGFVYRPGNFDHERQT
PSNWRLTSGNCSDYSQRAYMGAGHPGEFSGMIQICLLGTEHHSPGSQCCLDSRKPVSAAP
GVPLGVAEVRTCSFSSEKFVITDLLKPTSVTLSKSFSVQLCSVAGFLGQPTWGWSILFQD
VLLKMAGKLMLAVSSPWMPSASLLVNLLSALLILFVFGETEIRFTGQTEFVVNETSTTVI
RLIIERIGEPANVTAIVSLYGEDAGDFFDTYAAAFIPAGETNRTVYIAVCDDDLPEPDET
FIFHLTLQLPSIAVSEPKGRNESMPLTLIREKGTYGMVMVTFEVEGGPNPPDEDLSPVKG
NITFPPGRATVIYNLTVLDDE

>gi568815593r:90418822_90625289|GENSCAN_predicted_CDS_6|1323_bp
atggccaaggcagggtgttcccgacgccagagcgcggacctggctgcccgctgcggagag
cagagtgcgcagcccggggcggccacccccgctccgctggtcagtggtagtaagaatcag
cagcgcgggcaaggagtacggacgggagtcagaggcagagcgagggtgtgtggagggccg
gcggggaccgccgggagcgcgcggatgtcggtgttcctggggccaggggtttctcctccc
atgaatggacagcgaaagcttcatcctagaccaatcctgtctccacgatggctttgggga
cctgccttgccccagggttttgtctacaggcctggcaactttgaccatgagaggcagact
ccctctaactggaggctgacaagtggaaactgttcggattattcccagagggcttacatg
ggggcgggtcatcctggtgaattctcaggcatgatccaaatctgcctcctaggcacagaa
caccattctccagggtcgcagtgctgcctggactccaggaagccagtctctgctgctcct
ggtgtgcccctaggggtggccgaggttagaacatgctcatttagctcggagaagtttgtt
attaccgaccttctgaagcctacttctgtcaccttgtcaaagtcattctccgtccagctt
tgttccgttgctgggttcttggggcagcccacctggggctggagtatccttttccaagat
gtcttactcaagatggctggcaaattgatgctggctgttagttctccatggatgccctct
gcatctttattagtaaatcttctttcagctttactcatcctatttgtgtttggagaaaca
gaaataagatttactggacaaactgaatttgttgttaatgaaacaagtacaacagttatt
cgtcttatcattgaaaggataggagagccagcaaatgttactgcaattgtatcgctgtat
ggagaggacgctggtgacttttttgacacatatgctgcagcttttatacctgccggagaa
acaaacagaacagtgtacatagcagtatgtgatgatgacttaccagagcctgacgaaact
tttatttttcacttaacattacagcttccctcaatcgcagtgagtgagcccaagggcaga
aatgagtctatgcctcttactctcatcagggaaaagggaacctatggaatggtcatggtg
acttttgaggtagagggtggcccaaatccccctgatgaagatttgagtccagttaaagga
aatatcacctttccccctggcagagcaacagtaatttataacttgacagtactcgatgac
gag