GENSCAN 1.0	Date run: 30-Jun-119	Time: 14:57:01

Sequence gi568815588r:70498056_70700902 : 202847 bp : 49.54% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15830  15910   81  1  0   86   99   128 0.783  12.70
 1.02 Intr +  17313  17532  220  2  1    8   44   162 0.347   1.67
 1.03 Intr +  25074  25154   81  1  0   99   78    66 0.088   6.31
 1.04 Intr +  27940  28081  142  2  1    3   94   153 0.021   6.81
 1.05 Intr +  31174  31276  103  1  1  131   63   240 0.995  25.98
 1.06 Intr +  31834  32013  180  0  0   93  110   178 0.981  20.56
 1.07 Intr +  33235  33399  165  0  0   77   78   253 0.857  23.36
 1.08 Intr +  34566  34726  161  2  2   99   81   289 0.977  28.09
 1.09 Intr +  34940  35015   76  2  1  105   60    77 0.993   6.12
 1.10 Intr +  35867  36018  152  1  2   90   70   142 0.676  11.56
 1.11 Intr +  36370  36469  100  1  1   66  105    85 0.998   8.11
 1.12 Intr +  36684  36788  105  2  0   75   94    79 0.993   7.61
 1.13 Intr +  39756  39851   96  2  0  111   75   145 0.999  15.71
 1.14 Intr +  40225  40436  212  0  2   60   86   217 0.536  16.41
 1.15 Intr +  40797  40983  187  0  1   58   31   246 0.318  15.59
 1.16 Intr +  41037  41192  156  2  0   82   78   159 0.993  14.51
 1.17 Intr +  41525  41707  183  1  0   80   78   162 0.974  14.38
 1.18 Intr +  43047  43187  141  2  0   99   70   242 0.558  24.05
 1.19 Intr +  43408  43479   72  0  0   55   99    89 0.947   6.30
 1.20 Intr +  49251  49391  141  2  0  110   99   329 0.998  36.75
 1.21 Intr +  57417  57543  127  2  1   50   55    89 0.584   2.05
 1.22 Intr +  63939  64079  141  1  0   64   76    50 0.427   1.72
 1.23 Intr +  64222  64317   96  2  0  117   60    43 0.579   4.38
 1.24 Intr +  64553  64635   83  0  2   73   64    19 0.585  -2.64
 1.25 Intr +  66309  66464  156  2  0  138   78   247 0.999  28.91
 1.26 Term +  68526  68678  153  2  0  126   50   272 0.933  25.12
 1.27 PlyA +  81226  81231    6                               1.05

 2.05 PlyA -  81301  81296    6                               1.05
 2.04 Term -  90285  90248   38  1  2  116   50    26 0.213  -0.90
 2.03 Intr -  93657  93506  152  2  2   47   44   116 0.193   2.91
 2.02 Intr - 101126 100002 1125  1  0  100   69  1306 0.181 118.56
 2.01 Init - 102847 102309  539  1  2   63   94   879 0.999  78.34
 2.00 Prom - 114531 114492   40                              -5.36

 3.00 Prom + 117476 117515   40                               1.74
 3.01 Sngl + 134661 135056  396  2  0   37   44   301 0.971  16.85
 3.02 PlyA + 135193 135198    6                               1.05

 4.00 Prom + 143343 143382   40                              -4.06
 4.01 Init + 151055 151186  132  1  0   90  110    90 0.911  11.54
 4.02 Intr + 152248 152344   97  0  1   59   44    84 0.448   0.68
 4.03 Intr + 154527 154576   50  1  2  104   94    -1 0.482   0.50
 4.04 Term + 156851 156946   96  1  0   44   48   125 0.439   2.07
 4.05 PlyA + 159608 159613    6                               1.05

 5.00 Prom + 165744 165783   40                              -3.16
 5.01 Init + 174748 174829   82  0  1   83   96   193 0.999  18.73
 5.02 Intr + 176501 176940  440  0  2   83   87   250 0.909  17.63
 5.03 Term + 177727 177813   87  0  0  102   45    58 0.366   0.56
 5.04 PlyA + 178356 178361    6                               1.05

 6.06 PlyA - 180064 180059    6                               1.05
 6.05 Term - 183660 183494  167  1  2   38   48   173 0.693   6.38
 6.04 Intr - 191525 191317  209  1  2   95   70    70 0.640   4.62
 6.03 Intr - 192775 192630  146  1  2   15   43    88 0.407  -3.92
 6.02 Intr - 192902 192789  114  2  0   54   42    87 0.330   1.34
 6.01 Init - 195927 195739  189  0  0   67   40   190 0.601  11.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   4408   4248  161  2  2   55   42   156 0.879   5.80


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:70498056_70700902|GENSCAN_predicted_peptide_1|1169_aa
MAGPHPVTQGPLLAAGQALSSREPACQTKQNEESDVMIVVVKEGGCCGPAQPGSALLAAL
VESQGLLAIHRWRLGEAPGSSPGPEGSRLWQLAVAGSSVQAVNICVVSGPPLQGTSCSLS
LPLEPMRGTPFEGLQGSGTMDSRHSVSIHSFQSTSLHNSKAKSIIPNKVAPVVITYNCKE
EFQIHDELLKAHYTLGRLSDNTPEHYLVQGRYFLVRDVTEKMDVLGTVGSCGAPNFRQVQ
GGLTVFGMGQPSLSGFRRVLQKLQKDGHRECVIFCVREEPVLFLRADEDFVSYTPRDKQN
LHENLQGLGPGVRVESLELAIRKEIHDFAQLSENTYHVYHNTEDLWGEPHAVAIHGEDDL
HVTEEVYKRPLFLQPTYRYHRLPLPEQGSPLEAQLDAFVSVLRETPSLLQLRDAHGPPPA
LVFSCQMGVGRTNLGMVLGTLILLHRSGTTSQPEAAPTQAKPLPMEQFQVIQSFLRMVPQ
GRRMVEEVDRAITACAELHDLKEVVLENQKKLEGIRPESPAQGSGSRHSVWQRALWSLER
YFYLILFNYYLHEQYPLAFALSFSRWLCAHPELYRLPVTLSSAGPVAPRDLIARGSLVSM
TGSRRSGHGCVLALAPKHWIPVGLGRLLWVPGLVLSPQREDDLVSPDALSTVREMDVANF
RRVPRMPIYGTAQPSAKVTGPQGLGPPALGSILAYLTDAKRRLRKVVWVSLREEAVLECD
GHTYSLRWPGPPVAPDQLETLEAQLKAHLSEPPPGKEGPLTYRFQTCLTMQEVFSQHRRA
CPGLTYHRIPMPDFCAPREEDFDQLLEALRAALSKDPGTGFVFSCLSGQGRTTTAMVVAV
LAFWHIQGFPEVGEEELVSVPDAKFTKGEFQVVMKVVQLLPDGHRVKKEVDAALDTVSET
MTPMHYHLREIIICTYRQPRPGGNLVVAEKGSVGREAASRYCVTAWVGAELVLRPKELPG
VCGLGDGHGVVVPPCWMDERISELSVVHTCLLIPHFAEKSYFHKPGAWPQSSFWMDGWAG
FASYHLLCDPGGKDSKGRGDVPGARGMTPVPRPLPGAGRAAVGLGDGAKAAKEAQEMRRL
QLRSLQYLERYVCLILFNAYLHLEKADSWQRPFSTWMQEVASKAGIYEILNELGFPELES
GEDQPFSRLRYRWQEQSCSLEPSAPEDLL

>gi568815588r:70498056_70700902|GENSCAN_predicted_CDS_1|3510_bp
atggctggcccacacccggtgacccagggaccgctgctggctgcggggcaggctttgtca
tcccgagaacccgcctgccagacaaagcagaatgaggagagtgatgtgatgatcgtggtt
gttaaggagggtggctgctgtggcccagcccagcctggctctgccctgctggctgccttg
gttgagagccagggactgctggccattcacagatggcgcctgggcgaggcccctggttct
agtcctggtcctgaaggttcacgtctgtggcagctggcagttgctgggagttcagtgcag
gctgtgaacatctgtgtcgtctctgggccacccttgcagggcaccagctgtagcctgtca
ttgcctctggagcccatgagaggcaccccatttgagggcctacagggcagtggcacgatg
gacagtcggcactccgtcagcatccactccttccagagcactagcttgcataacagcaag
gccaagtccatcatccccaacaaggtggcccctgttgtgatcacgtacaactgcaaggag
gagttccagatccatgatgagctgctcaaggctcattacacgttgggccggctctcggac
aacacccctgagcactacctggtgcaaggccgctacttcctggtgcgggatgtcactgag
aagatggatgtgctgggcaccgtgggaagctgtggggcccccaacttccggcaggtgcag
ggtgggctcactgtgttcggcatgggacagcccagcctctcagggttcaggcgggtcctc
cagaaactccagaaggacggacatagggagtgtgtcatcttctgtgtgcgggaggaacct
gtgcttttcctgcgtgcagatgaggactttgtgtcctacacacctcgagacaagcagaac
cttcatgagaacctccagggccttggacccggggtccgggtggagagcctggagctggcc
atccggaaagagatccacgactttgcccagctgagcgagaacacataccatgtgtaccat
aacaccgaggacctgtggggggagccccatgctgtggccatccatggtgaggacgacttg
catgtgacggaggaggtgtacaagcggcccctcttcctgcagcccacctacaggtaccac
cgcctgcccctgcccgagcaagggagtcccctggaggcccagttggacgcctttgtcagt
gttctccgggagacccccagcctgctgcagctccgtgatgcccacgggcctcccccagcc
ctcgtcttcagctgccagatgggcgtgggcaggaccaacctgggcatggtcctgggcacc
ctcatcctgcttcaccgcagtgggaccacctcccagccagaggctgcccccacgcaggcc
aagcccctgcctatggagcagttccaggtgatccagagctttctccgcatggtgccccag
ggaaggaggatggtggaagaggtggacagagccatcactgcctgtgccgagttgcatgac
ctgaaagaagtggtcttggaaaaccagaagaagttagaaggtatccgaccggagagccca
gcccagggaagcggcagccgacacagcgtctggcagagggcgctgtggagcctggagcga
tacttctacctgatcctgtttaactactaccttcatgagcagtacccgctggcctttgcc
ctcagtttcagccgctggctgtgtgcccaccctgagctgtaccgcctgcccgtgacgctg
agctcagcaggccctgtggctccgagggacctcatcgccaggggctccctagtgagtatg
actggcagtcggagaagtgggcatggctgtgtactggccctggcccctaaacactggatt
cctgtagggttgggtcggctgctgtgggtcccaggcttggtgctctccccacagcgggag
gacgatctggtctccccggacgcgctcagcactgtcagagagatggatgtggccaacttc
cggcgggtgccccgcatgcccatctacggcacggcccagcccagcgccaaggtgaccggc
cctcagggcctgggtcccccagccctggggagcatcctggcctacctgacggacgccaag
aggaggctgcggaaggttgtctgggtgagccttcgggaggaggccgtgttggagtgtgac
gggcacacctacagcctgcggtggcctgggccccctgtggctcctgaccagctggagacc
ctggaggcccagctgaaggcccatctaagcgagcctcccccaggcaaggagggccccctg
acctacaggttccagacctgccttaccatgcaggaggtcttcagccagcaccgcagggcc
tgtcctggcctcacctaccaccgcatccccatgccggacttctgtgccccccgagaggag
gactttgaccagctgctggaggccctgcgggccgccctctccaaggacccaggcactggc
ttcgtgttcagctgcctcagcggccagggccgtaccacaactgcgatggtggtggctgtc
ctggccttctggcacatccaaggcttccccgaggtgggtgaggaggagctcgtgagtgtg
cctgatgccaagttcactaagggtgaatttcaggtagtaatgaaggtggtgcagctgcta
cccgatgggcaccgtgtgaagaaggaggtggacgcagcgctggacactgtcagcgagacc
atgacgcccatgcactaccacctgcgggagatcatcatctgcacctaccgccagccacga
cccgggggcaatcttgtggtggcagagaagggaagcgttggcagggaagctgccagccgc
tactgtgtgactgcctgggttggtgcagagttggtcctgcgaccaaaggagcttccagga
gtatgtggcttgggtgatgggcacggtgtagtggtccctccctgctggatggatgagcgg
attagtgagctttctgtggtgcacacgtgccttctcatccctcactttgctgagaaatcc
tacttccataaacctggggcctggccccagagctccttctggatggatgggtgggcaggc
tttgcaagttaccatctactctgcgaccctggaggcaaagacagcaaaggccgtggagat
gttcctggtgcccgagggatgacccctgtgccacgtcctcttcctggagcagggagagct
gctgtgggtttgggggatggggcgaaggcagcgaaagaggcgcaagaaatgcggaggctg
cagctgcggagcctgcagtacttggagcgctatgtctgcctgattctcttcaacgcgtac
ctccacctggagaaggccgactcctggcagaggcccttcagcacctggatgcaggaggtg
gcatcgaaggctggcatctacgagatccttaacgagctgggcttccccgagctggagagc
ggggaggaccagcccttctccaggctgcgctaccggtggcaggagcagagctgcagcctc
gagccctctgcccccgaggacttgctgtag

>gi568815588r:70498056_70700902|GENSCAN_predicted_peptide_2|617_aa
MAARLLLLGILLLLLPLPVPAPCHTAARSECKRSHKFVPGAWLAGEGVDVTSLRRSGSFP
VDTQRFLRPDGTCTLCENALQEGTLQRLPLALTNWRAQGSGCQRHVTRAKVSSTEAVARD
AARSIRNDWKVGLDVTPKPTSNVHVSVAGSHSQAANFAAQKTHQDQYSFSTDTVECRFYS
FHVVHTPPLHPDFKRALGDLPHHFNASTQPAYLRLISNYGTHFIRAVELGGRISALTALR
TCELALEGLTDNEVEDCLTVEAQVNIGIHGSISAEAKACEEKKKKHKMTASFHQTYRERH
SEVVGGHHTSINDLLFGIQAGPEQYSAWVNSLPGSPGLVDYTLEPLHVLLDSQDPRREAL
RRALSQYLTDRARWRDCSRPCPPGRQKSPRDPCQCVCHGSAVTTQDCCPRQRGLAQLEVT
FIQAWGLWGDWFTATDAYVKLFFGGQELRTSTVWDNNNPIWSVRLDFGDVLLATGGPLRL
QVWDQDSGRDDDLLGTCDQAPKSGSHEVRCNLNHGHLKFRYHARCLPHLGGGTCLDYVPQ
MLLGEPPGNRSGAVWQKDHWADSSPCSSFPSLSFREGAMEGPDTAQEKVEVELGQPPLFS
VADNRTIFNTVAGKDSL

>gi568815588r:70498056_70700902|GENSCAN_predicted_CDS_2|1854_bp
atggcagcccgtctgctcctcctgggcatccttctcctgctgctgcccctgcccgtccct
gccccgtgccacacagccgcacgctcagagtgcaagcgcagccacaagttcgtgcctggt
gcatggctggccggggagggtgtggacgtgaccagcctccgccgctcgggctccttccca
gtggacacacaaaggttcctgcggcccgacggcacctgcaccctctgtgaaaatgcccta
caggagggcaccctccagcgcctgcctctggcgctcaccaactggcgggcccagggctct
ggctgccagcgccatgtaaccagggccaaagtcagctccactgaagctgtggcccgggat
gcggctcgtagcatccgcaacgactggaaggtcgggctggacgtgactcctaagcccacc
agcaatgtgcatgtgtctgtggccggctcacactcacaggcagccaactttgcagcccag
aagacccaccaggaccagtacagcttcagcactgacacggtggagtgccgcttctacagt
ttccatgtggtacacactcccccgctgcaccctgacttcaagagggccctcggggacctg
ccccaccacttcaacgcctccacccagcccgcctacctcaggcttatctccaactacggc
acccacttcatccgggctgtggagctgggtggccgcatatcggccctcactgccctgcgc
acctgcgagctggccctggaagggctcacggacaacgaggtggaggactgcctgactgtc
gaggcccaggtcaacataggcatccacggcagcatctctgccgaagccaaggcctgtgag
gagaagaagaagaagcacaagatgacggcctccttccaccaaacctaccgggagcgccac
tcggaagtggttggcggccatcacacctccattaacgacctgctgttcgggatccaggcc
gggcccgagcagtactcagcctgggtaaactcgctgcccggcagccctggcctggtggac
tacaccctggaacccctgcacgtgctgctggacagccaggacccgcggcgggaggcactg
aggagggccctgagtcagtacctgacggacagggctcgctggagggactgcagccggccg
tgcccaccagggcggcagaagagcccccgagacccatgccagtgtgtgtgccatggctca
gcggtcaccacccaggactgctgccctcggcagaggggcctggcccagctggaggtgacc
ttcatccaagcatggggcctgtggggggactggttcactgccacggatgcctatgtgaag
ctcttctttggtggccaggagctgaggacgagcaccgtgtgggacaataacaaccccatc
tggtcagtgcggctggattttggggatgtgctcctggccacaggggggcccctgaggttg
caggtctgggatcaggactctggcagggacgatgacctccttggcacctgtgatcaggct
cccaagtctggttcccatgaggtgagatgcaacctgaatcatggccacctaaaattccgc
tatcatgccaggtgcttgccccacctgggaggaggcacctgcctggactatgtcccccaa
atgcttctgggggagcctccaggaaaccggagtggggccgtgtggcagaaggaccactgg
gctgattccagtccatgcagcagcttcccctcactctccttccgtgaaggagccatggaa
gggccagacactgcccaggagaaggtggaggtggagctgggccagccgcctctcttctct
gtagctgacaacagaaccatcttcaacacagtggctggaaaggactcactttag

>gi568815588r:70498056_70700902|GENSCAN_predicted_peptide_3|131_aa
MEENQDRENITNIWEDYTIKDVIIATEKAVKAIKPESINSCWRKLCPDVVHDFVGFMTEP
IKELKTEIVVMAKRSGDGGEGFQDMDLGEIQELIDTTSEELIEDDLMEMNASKQLQDDEK
EDTEQIAPETN

>gi568815588r:70498056_70700902|GENSCAN_predicted_CDS_3|396_bp
atggaagaaaaccaagacagagagaatatcacgaatatctgggaggattacaccattaaa
gatgtcatcattgctacagaaaaagctgtgaaagccatcaagcctgaatcaataaattcc
tgctggagaaaactgtgtccagatgttgtgcatgacttcgtaggatttatgacagagcca
atcaaagaactcaaaacagagattgtggttatggcaaaaaggtcgggggatggtggtgaa
gggtttcaagatatggatcttggagaaattcaagagctaatagacaccacatcagaggaa
ttaatagaagatgacttgatggagatgaatgcttccaaacaactgcaagatgatgagaaa
gaagacacagaacaaatagcgccagaaacaaattga

>gi568815588r:70498056_70700902|GENSCAN_predicted_peptide_4|124_aa
MEKVLKQLEAQSIKKEQTFAGRVGWAFLTVQWEVHTLSLRDVVQQQFQKMLEGEKDITAR
PSPSWVLQIKDYLLQPGRRRKGQGVPKADRELQPGLQSETLSNNNNNNNNNNNNNKTPKA
LEQE

>gi568815588r:70498056_70700902|GENSCAN_predicted_CDS_4|375_bp
atggagaaggtgctgaagcagctggaagcacagagcatcaagaaggagcaaacctttgct
ggcagagttggatgggcatttttgactgtgcaatgggaagtacacaccctgtctctgagg
gatgtagtgcagcagcaattccagaaaatgctcgagggggagaaggacattactgcacga
cccagtcccagctgggtgctccagatcaaagactacttgctgcagccaggtaggaggagg
aagggccaaggagtccccaaagctgatagagagctccagcctgggcttcagagcgagact
ctttctaacaacaacaacaacaacaacaacaacaacaacaacaacaaaacccccaaagct
ttagagcaggaatga

>gi568815588r:70498056_70700902|GENSCAN_predicted_peptide_5|202_aa
MAPLRALLSYLLPLHCALCAAAGSRTPELHLSGKLSDYGVTVPCSTDFRGRFLSHVVSGP
AAASAGSMVVDTPPTLPRHSSHLRVARSPLHPGGTLWPGRVGRHSLYFNVTVFGKELHLR
LRPNRRLVVPGSSVEWQEDFRELFRQPLRQECVYTGGVTGMPGAAVAISNCDGLCAGPCE
LAQQPQGPVGQLFPAPETSDVS

>gi568815588r:70498056_70700902|GENSCAN_predicted_CDS_5|609_bp
atggctccactccgcgcgctgctgtcctacctgctgcctttgcactgtgcgctctgcgcc
gccgcgggcagccggaccccagagctgcacctctctggaaagctcagtgactatggtgtg
acagtgccctgcagcacagactttcggggacgcttcctctcccacgtggtgtctggccca
gcagcagcctctgcagggagcatggtagtggacacgccacccacactaccacgacactcc
agtcacctccgggtggctcgcagccctctgcacccaggagggaccctgtggcctggcagg
gtggggcgccactccctctacttcaatgtcactgttttcgggaaggaactgcacttgcgc
ctgcggcccaatcggaggttggtagtgccaggatcctcagtggagtggcaggaggatttt
cgggagctgttccggcagcccttacggcaggagtgtgtgtacactggaggtgtcactgga
atgcctggggcagctgttgccatcagcaactgtgacggattgtgtgcaggcccttgtgag
ctggcacagcagcctcaaggtcctgttgggcagctcttccctgccccagagacatcagat
gtgagctga

>gi568815588r:70498056_70700902|GENSCAN_predicted_peptide_6|274_aa
MGLKAARLVHNWHALPRTSARHPIPAPSALPQQAKGSKKHQEAESLCQLERVIWDDHSAT
VPKPTKLGEGALPGPCLALSPGSSHGSRMKRQEAALKCQQAALSGGAAPCVEALQFERCH
SDAHQLTVSSTGQGAAPLAVENRPKRGPHRITSNKNPHNGATQDPFCTRATVPMGLRAFA
PAVHPTRNAPFTQLEGHPITAPSFVLCGGGSWQVLYPCPGWNVEPTRSFPGRPQDAYSLI
QPVKSSPRGKDRCLAQETKKPQTSLLCTSIELEG

>gi568815588r:70498056_70700902|GENSCAN_predicted_CDS_6|825_bp
atggggctgaaagctgccagacttgtccacaactggcacgctctgccacgtacatctgca
cggcaccccataccagcaccatcagcgctgccacaacaagccaaaggttcaaagaaacac
caggaagcagagagcctctgccagctggagagagttatctgggatgaccactcggccaca
gttcccaagcccaccaagctcggcgaaggagctctgcctggcccctgcttggccctgagt
cctggaagcagccatggctccaggatgaagagacaggaagcagccctcaagtgccagcag
gcggccctgagcggaggagcggcaccctgcgtggaggccctgcagtttgaacgctgccac
tcagacgcacaccagctgacagtgagcagcactgggcaaggtgctgcacccttggcagtg
gagaacaggcccaagagagggccccacagaattaccagcaacaaaaatccccacaatgga
gccacacaggacccgttctgtaccagagccacagttcccatgggcctccgcgccttcgcc
cctgctgtgcaccccactaggaatgcccctttcacccagctcgaaggccaccccatcact
gctccctcctttgtgctctgtggtggtggctcttggcaggtgctctatccctgtccaggg
tggaatgtggagccgacccgcagcttcccagggcgcccacaggacgcctactcactcatc
cagccagtcaagagcagcccccggggcaaggacaggtgtttggcacaggagaccaaaaag
ccacagacaagtctgctgtgcaccagcatcgagctggaaggatga