GENSCAN 1.0	Date run:  6-Nov-116	Time: 20:30:41

Sequence gi568815597r:207787741_208011080 : 223340 bp : 44.51% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -  14461  14228  234  0  0   55   46   236 0.365  12.90
 1.01 Init -  18323  18265   59  2  2   77  113    71 0.927   7.28
 1.00 Prom -  29060  29021   40                              -1.06

 2.12 PlyA -  29533  29528    6                              -0.45
 2.11 Term -  30741  30638  104  1  2  144   48    36 0.939   3.64
 2.10 Intr -  31589  31445  145  2  1   46   26   153 0.542   4.76
 2.09 Intr -  32219  32123   97  1  1  114   34    49 0.846   2.11
 2.08 Intr -  35646  35570   77  0  2  110  116     0 0.858   3.31
 2.07 Intr -  36841  36721  121  0  1   78   72    63 0.857   4.20
 2.06 Intr -  44402  44396    7  0  1  112   96     0 0.001  -4.01
 2.05 Intr -  57478  57353  126  2  0   76   97    14 0.145   1.75
 2.04 Intr -  62082  61966  117  1  0   98   69    60 0.361   5.54
 2.03 Intr -  73048  72860  189  2  0   84   61    89 0.249   5.36
 2.02 Intr -  78986  78914   73  2  1  131   84     6 0.101   3.48
 2.01 Init -  81188  81105   84  2  0   90   27   165 0.349   9.42
 2.00 Prom -  84681  84642   40                              -5.66

 3.08 PlyA -  84972  84967    6                               1.05
 3.07 Term - 101106 100849  258  0  0   86   43   170 0.452   7.85
 3.06 Intr - 101473 101421   53  2  2   64  115    40 0.908   2.93
 3.05 Intr - 101881 101725  157  1  1  109  110    51 0.898   8.98
 3.04 Intr - 109833 109753   81  0  0   71   75    39 0.577   0.73
 3.03 Intr - 111486 111233  254  1  2   81   98    31 0.401   0.55
 3.02 Intr - 112263 112081  183  1  0   87   98    87 0.847   9.36
 3.01 Init - 123340 123262   79  1  1   69   66   122 0.588   7.32
 3.00 Prom - 142996 142957   40                              -2.66

 4.00 Prom + 160039 160078   40                              -2.86
 4.01 Sngl + 171548 171835  288  1  0   78   40   173 0.579   5.10
 4.02 PlyA + 174178 174183    6                               1.05

 5.04 PlyA - 174358 174353    6                              -0.45
 5.03 Term - 175575 175218  358  2  1   72   42   194 0.565   7.18
 5.02 Intr - 176027 175839  189  1  0   59   44   175 0.538   8.90
 5.01 Init - 214118 214060   59  2  2   75  103     8 0.035   1.79

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 185554 185633   80  2  2   49   36   118 0.810   0.63


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:207787741_208011080|GENSCAN_predicted_peptide_1|98_aa
MAIWAWLPAPPIWLEHTSVTSHHQHECVRRAFECGDCHILLDNNVLGVDCHGAGERAVHL
EDHFVHIDTISLLLEDALEYSALIAGHPKSDLPPGLSS

>gi568815597r:207787741_208011080|GENSCAN_predicted_CDS_1|294_bp
atggccatctgggcttggcttccggctccccccatctggctggaacacacatcagtcacc
agccatcaccagcatgaatgtgttcgtagggcctttgagtgtggcgattgtcatattctg
ttggataacaatgtattgggtgtcgattgtcatggggcaggggagagggcagtacacctg
gaggaccattttgtccacatcgacaccatcagtctgctcttagaggatgccctggagtat
tcggcgttgattgcggggcacccgaaatcagacttgccacctggactgtcgagn

>gi568815597r:207787741_208011080|GENSCAN_predicted_peptide_2|379_aa
MPRAPAALRSRPTPAAARPWGAAGLAAGLGSWQLRRSWSRCRGKGMDVITGQVLAVFTSS
LDSHHSDESAPGKVHGNSHDPDSSGHFFIFLTGALQFGTADHTLFLDAVSSLGFQVFMGN
LGSEILRHLTILPSGSCFQAIAKAPVVQFPIESPCCSECLRGIHQTSGQAGEGEPETYPG
TEPEGAFMNVLSNSSFGCRNSREKKVLVFGQKGKKQQKSAMTVILDLSVAQRVNGTVVRW
TDRLVLQVVWVSASICLSVQVLCGRFTQDDGFFLVAEIDGLTDSVILVAFLVQEEGEQWL
PASLTLLSPTGGELGTLKPLVTNSGAAEQSVTTASESSVDGNGDPGETVGLEFLTLLILF
ASSWRLWVLGFSPYRSFAL

>gi568815597r:207787741_208011080|GENSCAN_predicted_CDS_2|1140_bp
atgcccagggccccggccgcgctccggtcgcgccccaccccggctgcagcgcggccttgg
ggcgctgctggcctcgccgcggggctcggcagttggcagttgcgtaggagttggagtaga
tgcagggggaagggcatggacgtcatcacagggcaggtccttgctgtgttcacatcctct
cttgactcacaccactctgatgaaagtgctcctggcaaggtccatggtaactcccatgat
cctgactctagtggtcacttcttcatcttcctcacaggagctcttcagtttggcaccgct
gatcatacccttttccttgacgctgtttcttcacttggcttccaggtatttatggggaac
cttggtagtgaaatacttcggcatctaacaatattgccttcaggaagttgtttccaagcc
atcgctaaagctcctgtggtccagtttcccatagaatccccctgctgctcagagtgcctg
agaggaatacaccagacctcagggcaggctggggagggtgaaccggagacttatcctggt
acggagccagaaggagccttcatgaatgtcttgtcaaactcttcatttggctgcagaaat
tccagggagaaaaaggtcctggtttttggccaaaaaggcaaaaaacaacagaaatcagct
atgactgtaatcctggacttgtctgtggcacaaagagttaatgggacagtggtcaggtgg
acagacagactggttctccaagttgtttgggtgtcagcgtccatctgtctgtccgtgcag
gtcttatgtggaaggttcactcaagatgatggcttttttcttgtagctgaaattgatgga
ttaactgactcagttatcctggttgccttcctcgtacaagaggagggagagcagtggctg
cctgcttccctgacgctgctgagtcccacgggaggggagctgggcaccctgaagcccctc
gttaccaattcgggggccgcggagcagagtgtgacgacagccagtgagtcgtcagtcgac
ggcaatggggaccctggtgaaacagtgggccttgagttcttgacccttttaattttgttt
gcgtcatcatggcggctgtgggttctaggcttttctccataccgcagctttgcgctatag

>gi568815597r:207787741_208011080|GENSCAN_predicted_peptide_3|354_aa
MLVRRGARAGPRMPRGWTALCLLSLLPSGFMSLDNNGTATPELPTQGTFSNVSTNVSYQE
TTTPSTLGSTSLHPVSQHGNEATTNITETTVKFTSTSVITSVYGNTNSSVQSQTSVISTV
FTTPANVSTPETTLKPSLSPGNVSDLSTTSTSLATSPTKPYTSSSPILSDIKAEIKCSGI
REVKLTQGICLEQNKTSSCAEFKKDRGEGLARVLCGEEQADADAGAQVCSLLLAQSEVRP
QCLLLVLANRTEISSKLQLMKKHQSDLKKLGILDFTEQDVASHQSYSQKTLIALVTSGAL
LAVLGITGYFLMNRRSWSPTGERLVSSGGQGKGNEEDSGFLGSSVDVMEQEEKY

>gi568815597r:207787741_208011080|GENSCAN_predicted_CDS_3|1065_bp
atgctggtccgcaggggcgcgcgcgcagggcccaggatgccgcggggctggaccgcgctt
tgcttgctgagtttgctgccttctgggttcatgagtcttgacaacaacggtactgctacc
ccagagttacctacccagggaacattttcaaatgtttctacaaatgtatcctaccaagaa
actacaacacctagtacccttggaagtaccagcctgcaccctgtgtctcaacatggcaat
gaggccacaacaaacatcacagaaacgacagtcaaattcacatctacctctgtgataacc
tcagtttatggaaacacaaactcttctgtccagtcacagacctctgtaatcagcacagtg
ttcaccaccccagccaacgtttcaactccagagacaaccttgaagcctagcctgtcacct
ggaaatgtttcagacctttcaaccactagcactagccttgcaacatctcccactaaaccc
tatacatcatcttctcctatcctaagtgacatcaaggcagaaatcaaatgttcaggcatc
agagaagtgaaattgactcagggcatctgcctggagcaaaataagacctccagctgtgcg
gagtttaagaaggacaggggagagggcctggcccgagtgctgtgtggggaggagcaggct
gatgctgatgctggggcccaggtatgctccctgctccttgcccagtctgaggtgaggcct
cagtgtctactgctggtcttggccaacagaacagaaatttccagcaaactccaacttatg
aaaaagcaccaatctgacctgaaaaagctggggatcctagatttcactgagcaagatgtt
gcaagccaccagagctattcccaaaagaccctgattgcactggtcacctcgggagccctg
ctggctgtcttgggcatcactggctatttcctgatgaatcgccgcagctggagccccaca
ggagaaaggctggtcagttctgggggccagggtaaaggaaatgaggaagatagtgggttt
ctggggagttcagtggatgtcatggagcaggaggagaaatactag

>gi568815597r:207787741_208011080|GENSCAN_predicted_peptide_4|95_aa
MIQNRPSALAPAPGASEPGLAVSAPSEPCGPRARARRDPLRQDPADPAAAGPSASRRGLT
PTVHACNTRAVRRVRSWVCAWDSGLPALLVPHPLP

>gi568815597r:207787741_208011080|GENSCAN_predicted_CDS_4|288_bp
atgattcagaaccgcccgtcagccttggctccagcgcctggcgcgagcgaaccgggcttg
gctgtctcggccccgtctgaaccctgcgggccgcgggccagggcgcgccgggatccgctg
cgccaggaccctgcagacccggccgcggccgggccgagtgcctcccgccggggccttacg
cccacggtccacgcttgcaacaccagggctgtacggcgggtccgcagctgggtctgcgcc
tgggactcggggctccctgcgctcctcgtgccgcaccccttgccttaa

>gi568815597r:207787741_208011080|GENSCAN_predicted_peptide_5|201_aa
MGERATAQGHLRMQGSVKSSAPPLRGSGRAMAPCGHERAAAGRRNTTAPGFPSLRLRRPE
ADPRRSLAKRPASASGCRGCSLHLSKVAFILYRQKFLYPEARSLGEGHWERRICRAPVTG
LWTVFLLLEVSGSEQETIPELSQAPMRRKTEAAHCPGPWSLPVKSKPGHVGPLLGTLSWH
PQLLEKVSAPKASRPASIVWP

>gi568815597r:207787741_208011080|GENSCAN_predicted_CDS_5|606_bp
atgggggagagagcaacagcccaaggtcacctcaggatgcaaggatcggtcaaatccagc
gcacctccgctgcgtggaagcggccgtgccatggcgccttgcggccacgagagggcagcc
gcgggccgcagaaacaccaccgcgcccggcttcccgagcctgcgcctgcgcagacccgag
gccgacccgaggcggtcgctggccaagcgcccggccagcgcttccggctgccgaggctgc
agccttcacctgagcaaggtcgccttcatcctttacagacagaagttcctctacccggag
gcccggagcctgggagagggccactgggaacgtcgcatttgcagagccccagtaaccggg
ctgtggaccgtcttcttactgcttgaagtttcaggctcagagcaggaaacgattccagag
ctcagccaggcaccgatgagaagaaaaacagaagcagcacattgcccagggccatggagc
ttgccagtgaagagcaaaccaggccacgtagggccgctgcttgggaccctgtcctggcac
ccccagctcttggagaaagtcagcgctcccaaggcctccaggcccgccagcatcgtctgg
ccctga