GENSCAN 1.0	Date run:  3-Nov-116	Time: 11:36:06

Sequence gi568815597f:25240487_25460702 : 220216 bp : 45.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   1126   1121    6                               1.05
 1.04 Term -   2219   2103  117  2  0   83   42    37 0.745  -2.86
 1.03 Intr -   3147   3064   84  0  0   49  101    87 0.957   6.12
 1.02 Intr -   4815   4664  152  1  2  118  100   121 0.996  16.18
 1.01 Init -   6477   5958  520  0  1   69   98   448 0.921  38.93
 1.00 Prom -  13194  13155   40                              -4.96

 2.00 Prom +  22014  22053   40                              -3.26
 2.01 Init +  32062  32209  148  0  1   60  100    94 0.473   6.17
 2.02 Intr +  43422  43481   60  1  0  111  100    -2 0.237   2.01
 2.03 Intr +  44087  44273  187  0  1   27   72   247 0.366  15.75
 2.04 Intr +  50155  50305  151  1  1  100   92   143 0.933  16.06
 2.05 Intr +  51175  51306  132  0  0    0  116    86 0.884   3.44
 2.06 Intr +  60460  60607  148  0  1   80   82   134 0.679  11.81
 2.07 Intr +  61034  61200  167  0  2   84  105   126 0.974  13.58
 2.08 Intr +  62836  62973  138  0  0   95  111    49 0.996   8.56
 2.09 Intr +  66110  66243  134  1  2   65   34   204 0.970  12.14
 2.10 Intr +  76514  76593   80  2  2  122   82    68 0.881   8.79
 2.11 Intr + 111140 111207   68  0  2   78   99    87 0.555   7.42
 2.12 Term + 121569 121610   42  2  0  113   41    24 0.090  -2.64
 2.13 PlyA + 121761 121766    6                               1.05

 3.12 PlyA - 121845 121840    6                               1.05
 3.11 Term - 128950 128805  146  2  2   78   47    28 0.211  -4.23
 3.10 Intr - 134942 134863   80  1  2  122   82    63 0.896   8.29
 3.09 Intr - 145358 145225  134  2  2   78   34   151 0.979   8.14
 3.08 Intr - 148627 148490  138  1  0   95  111    50 0.995   8.66
 3.07 Intr - 150429 150263  167  1  2   84   89    62 0.936   5.58
 3.06 Intr - 151655 151508  148  2  1   80   82    98 0.638   8.21
 3.05 Intr - 161216 161085  132  2  0  -12  116    67 0.407   0.34
 3.04 Intr - 162260 162110  151  1  1   89   92   137 0.388  14.36
 3.03 Intr - 168383 168197  187  0  1   33   72   204 0.381  12.05
 3.02 Intr - 169048 168989   60  2  0  111  100   -13 0.261   0.91
 3.01 Init - 180300 180153  148  0  1   60  100    98 0.541   6.64
 3.00 Prom - 181982 181943   40                              -7.66

 4.00 Prom + 182776 182815   40                              -7.96
 4.01 Init + 189487 189818  332  0  2   38   61   218 0.477   8.90
 4.02 Intr + 190606 190692   87  1  0   19   99   142 0.520   7.49
 4.03 Intr + 206276 206417  142  2  1   94   84    49 0.554   5.46
 4.04 Intr + 208322 208448  127  1  1  100  111   -79 0.220  -4.15
 4.05 Intr + 213773 213896  124  0  1   91  119     5 0.569   3.54
 4.06 Intr + 216167 216345  179  2  2   71  100   107 0.644   9.76
 4.07 Intr + 217905 218406  502  1  1   45  111   248 0.648  14.84

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:25240487_25460702|GENSCAN_predicted_peptide_1|290_aa
MSNYVNDMWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS
KSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR
SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLE
IAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEK
PTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKSPYGLWIPI

>gi568815597f:25240487_25460702|GENSCAN_predicted_CDS_1|873_bp
atgtccaactacgtgaacgacatgtggccgggctcgccgcaggagaaggattcgccctcg
acctcgcggtcgggcgggtccagccggctgtcgtcgcggtctaggagccgctctttttcc
agaagctctcggtcccattcccgcgtctcgagccggttttcgtccaggagtcggaggagc
aagtccaggtcccgttcccgaaggcgccaccagcggaagtacaggcgctactcgcggtca
tactcgcggagccggtcgcgatcccgcagccgccgttaccgagagaggcgctacgggttc
accaggagatactaccggtctccttcgcggtaccggtcccggtcccgtagcaggtcgcgc
tctcggggaaggtcgtactgcggaagggcgtacgcgatcgcgcggggacagcgctactac
ggctttggtcgcacagtgtacccggaggagcacagcagatggagggacagatccaggacg
aggtcgcggagcagaaccccctttcgcttaagtgaaaaagatcgaatggagctgttagaa
atagcaaaaaccaatgcagcgaaagctctaggaacaaccaacattgacttgccagctagt
ctcagaactgttccttcagccaaagaaacaagccgtggaataggtgtatcaagtaatggt
gcaaagcctgaactgtcggaaaaggtaacagaagatggaactcgaaatcccaatgaaaaa
cctacccagcaaagaagcatagcttttagctctaataattctgtagcaaagccaatacaa
aaatcagctaaagctgccacagaagaggcatcttcaagatcaccaaaaatagatcagaaa
aaaagtccatatggactgtggatacctatctaa

>gi568815597f:25240487_25460702|GENSCAN_predicted_peptide_2|484_aa
MSSKYPRSVRRCLPLWALTLEAALILLFYFFTHYDASLEDQKGLVASYQGASLPLTCHSS
LCSGSETGKVGQDLTVMAAIGLGFLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQ
FPSGKVVITLFSIRLATMSALSVLISVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNI
FNSLTSSGSSKFVQPASSFSQCVSVTAYVLSLGEPVESLNLKAAVKTDYHMNMMHIYVFA
AYFGLSVAWCLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKN
AVFNTYYAVAVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTSCHLIPSPWLAMV
LGLVAGLISVGGAKYLPGCCNRVLGIPHSSIMGYNFSLLGLLGEIIYIVLLVLDTVGAGN
GMIGFQVLLSIGELSLAIVIALMSGLLTGLMQYRMDKSEVIVTVKVVWVKQCNSEYAQGM
PATL

>gi568815597f:25240487_25460702|GENSCAN_predicted_CDS_2|1455_bp
atgagctctaagtacccgcggtctgtccggcgctgcctgcccctctgggccctaacactg
gaagcagctctcattctcctcttctatttttttacccactatgacgcttccttagaggat
caaaaggggctcgtggcatcctatcaaggtgcgtctcttccactcacctgccacagcagc
ctctgctcagggtctgagaccgggaaagttggccaagatctgaccgtgatggcggccatt
ggcttgggcttcctcacctcgagtttccggagacacagctggagcagtgtggccttcaac
ctcttcatgctggcgcttggtgtgcagtgggcaatcctgctggacggcttcctgagccag
ttcccttctgggaaggtggtcatcacactgttcagtattcggctggccaccatgagtgct
ttgtcggtgctgatctcagtggatgctgtcttggggaaggtcaacttggcgcagttggtg
gtgatggtgctggtggaggtgacagctttaggcaacctgaggatggtcatcagtaatatc
ttcaacagcctcaccagcagtgggtccagcaagtttgtacagccagcatcttctttcagt
cagtgcgtgtcagtaactgcatatgtcctctcattgggagagcctgtcgaaagtctaaat
ttgaaggcagctgtgaagacagactaccacatgaacatgatgcacatctacgtgttcgca
gcctattttgggctgtctgtggcctggtgcctgccaaagcctctacccgagggaacggag
gataaagatcagacagcaacgatacccagtttgtctgccatgctgggcgccctcttcttg
tggatgttctggccaagtttcaactctgctctgctgagaagtccaatcgaaaggaagaat
gccgtgttcaacacctactatgctgtagcagtcagcgtggtgacagccatctcagggtca
tccttggctcacccccaagggaagatcagcaagacttatgtgcacagtgcggtgttggca
ggaggcgtggctgtgggtacctcgtgtcacctgatcccttctccgtggcttgccatggtg
ctgggtcttgtggctgggctgatctccgtcgggggagccaagtacctgccggggtgttgt
aaccgagtgctggggattccccacagctccatcatgggctacaacttcagcttgctgggt
ctgcttggagagatcatctacattgtgctgctggtgcttgataccgtcggagccggcaat
ggcatgattggcttccaggtcctcctcagcattggggaactcagcttggccatcgtgata
gctctcatgtctggtctcctgacaggattaatgcagtatcgaatggacaagtccgaggtg
atagttacagtgaaggttgtctgggtcaaacagtgcaattcagaatatgctcagggaatg
ccagccaccttgtaa

>gi568815597f:25240487_25460702|GENSCAN_predicted_peptide_3|496_aa
MSSKYPRSVRRCLPLCALTLEAALILLFYFFTHYDASLEDQKGLVASYQGASLPLTCHSS
LCSGSETGKVGQDLTVMAALGLGFLTSNFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQ
FPPGKVVITLFSIRLATMSAMSVLISAGAVLGKVNLAQLVVMVLVEVTALGTLRMVISNI
FNSLTSSGSSKFVQPASSFSQCVSVTAHVLSLGEPVESLSLKAAVKTDYHMNLRHFYVFA
AYFGLTVAWCLPKPLPKGTEDNDQRATIPSLSAMLGALFLWMFWPSVNSALLRSPIQRKN
AMFNTYYALAVSVVTAISGSSLAHPQRKISMTYVHSAVLAGGVAVGTSCHLIPSPWLAMV
LGLVAGLISIGGAKCLPVCCNRVLGIHHISVMHSIFSLLGLLGEITYIVLLVLHTVWNGN
GMIGFQVLLSIGELSLAIVIALTSGLLTGHPLVNAVGRLDQQGPVLSQQVQANSGQAAAR
CCAFVSGRSKTGTQAF

>gi568815597f:25240487_25460702|GENSCAN_predicted_CDS_3|1491_bp
atgagctctaagtacccgcggtctgtccggcgctgcctgcccctctgcgccctaacactg
gaagcagctctcattctcctcttctatttttttacccactatgacgcttccttagaggat
caaaaggggctcgtggcatcctatcaaggtgcatctcttccactcacctgccacagcagc
ctctgctcagggtctgagactgggaaagtcggccaagatctgaccgtgatggcggccctt
ggcttgggcttcctcacctcaaatttccggagacacagctggagcagtgtggccttcaac
ctcttcatgctggcgcttggtgtgcagtgggcaatcctgctggacggcttcctgagccag
ttccctcctgggaaggtggtcatcacactgttcagtattcggctggccaccatgagtgct
atgtcggtgctgatctcagcgggtgctgtcttggggaaggtcaacttggcgcagttggtg
gtgatggtgctggtggaggtgacagctttaggcaccctgaggatggtcatcagtaatatc
ttcaacagcctcaccagcagtgggtccagcaagtttgtacagccagcatcttctttcagt
cagtgcgtgtcagtaactgcacatgtcctctcattgggagagcctgtcgaaagtctaagt
ttgaaggcagctgtgaagacagactaccacatgaacctgaggcacttctacgtgttcgca
gcctattttgggctgactgtggcctggtgcctgccaaagcctctacccaagggaacggag
gataatgatcagagagcaacgatacccagtttgtctgccatgctgggcgccctcttcttg
tggatgttctggccaagtgtcaactctgctctgctgagaagtccaatccaaaggaagaat
gccatgttcaacacctactatgctctagcagtcagtgtggtgacagccatctcagggtca
tccttggctcacccccaaaggaagatcagcatgacttatgtgcacagtgcggtgttggca
ggaggcgtggctgtgggtacctcgtgtcacctgatcccttctccgtggcttgccatggtg
ctgggtcttgtggctgggctgatctccatcgggggagccaagtgcctgccggtgtgttgt
aaccgagtgctggggattcaccacatctccgtcatgcactccatcttcagcttgctgggt
ctgcttggagagatcacctacattgtgctgctggtgcttcatactgtctggaacggcaat
ggcatgattggcttccaggtcctcctcagcattggggaactcagcttggccatcgtgata
gctctcacgtctggtctcctgacaggccatcctctagtcaatgctgtgggtaggctggac
cagcagggaccagtattgtcacagcaagtccaggccaacagtggtcaggctgctgcccgg
tgttgtgcctttgtgagtggcagatccaagaccggaacccaggccttctga

>gi568815597f:25240487_25460702|GENSCAN_predicted_peptide_4|498_aa
MSTKREGSPAPRPRLAGARTRRAGSRSGPARPGGRCFAVVPSRVLRTRRPRGPQRCPACG
RGARAAPPHTPRASLRYVARPHGSAPWRNPGRGRHLRLAGALSPRRGKLAGGRMKRRNAD
CSKLRRPLKRNRITEGIYGSTFLYLKFLVVWALVLLADFVLEFRFEYLWPFWLFIRSVYD
SFRYQGLAFSVFFVCVAFTSNIICLLFIPIQWLFFAASTYVWVQYVWHTERGVCLPTVSL
WILFVYIEAAIRFKDLKNFHVDLCRPFAAHCIGYPVVTLGFGFKSYVSYKMRLRKQKEVQ
KENEFYMQLLQQALPPEQQMLQKQEKEAEEAAKGLPDMDSSILIHHNGGIPANKKLSTTL
PEIEYREKGKEKDKDAKKHNLGINNNNILQPVDSKIQEIEYMENHINSKRLNNDLVGSTE
NLLKEDSCTASSKNYKNASGVVNSSPRSHSATNGSIPSSSSKNEKKQKCTSKSPSTHKDL
MENCIPNNQLSKPDALVS

>gi568815597f:25240487_25460702|GENSCAN_predicted_CDS_4|1494_bp
atgagtacgaagcgtgaagggtcgccggccccgcgtccccgccttgcaggagcccggacc
cgccgagcaggctcccggtccggcccggcccggcccggaggccgatgcttcgcggtagtg
ccctcgcgggtcctgcggactcggcgcccgcggggcccacagcgctgcccagcctgtgga
cgtggagcccgggccgcaccgccgcacacgccccgggcatctctgcgctacgtcgcgcgc
ccccacggctccgccccgtggcgtaacccggggcggggccgccacctccgattggccggc
gcgctgtcaccacgtcgcgggaagctggcaggcgggaggatgaagcggcggaacgccgac
tgcagtaagctccgccgccccctaaagcggaaccggatcaccgagggcatttacggcagt
acatttttatacctgaaattcctggtggtgtgggcacttgtcctcctagcagattttgtc
ctggagttcagatttgaatacctgtggccattctggcttttcatcagaagcgtctatgat
tccttcagataccagggactggccttctcagtattttttgtttgtgtagcattcacgtca
aatataatatgcctgctgttcatccccatacagtggcttttttttgctgctagcacatat
gtatgggttcagtacgtatggcacacagaaaggggagtgtgtttgcctacagtgtctctc
tggatcctctttgtttatattgaagcagccattagatttaaagatctcaaaaactttcat
gtagacctttgtcgtccatttgctgctcactgtattgggtaccctgtggtaactttgggg
tttggcttcaaaagttacgtaagctacaaaatgcggttaaggaagcaaaaagaagtacaa
aaagagaacgagttttacatgcaacttcttcaacaagctctccctccagagcaacagatg
ctacagaagcaagaaaaagaggccgaggaagcagccaaaggattacctgatatggattct
tcgatccttatacaccacaatggaggtatcccagccaacaaaaaactctccacaactttg
ccagagatagaataccgagaaaaagggaaagaaaaggacaaggatgccaaaaaacacaac
cttggaataaataacaacaatattctacaacctgtagactctaaaatacaagagattgag
tatatggaaaaccatatcaatagtaaaagattaaataatgatcttgtgggaagtacagaa
aatctcttgaaagaggactcatgcactgcttcctcaaaaaattacaaaaatgccagtgga
gttgtgaactcttcacctcgaagtcatagcgccacaaatgggagcattccttcctcatct
agtaaaaatgagaagaagcagaaatgcactagcaagagcccaagtacacacaaggactta
atggaaaactgtattcctaataaccagctaagcaaaccagacgcactggtcagn