GENSCAN 1.0	Date run: 16-Aug-121	Time: 14:40:02

Sequence gi568815591f:86665146_86964352 : 299207 bp : 36.75% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  52617  52657   41  2  2   81   99    37 0.324   3.81
 1.02 Term +  61687  61843  157  1  1   77   38    99 0.524   0.22
 1.03 PlyA +  61940  61945    6                               1.05

 2.00 Prom +  63802  63841   40                              -4.45
 2.01 Init +  68411  68550  140  1  2   62   92   106 0.868   8.06
 2.02 Intr +  68894  69036  143  2  2  111   63    39 0.900   2.78
 2.03 Term +  70071  70138   68  1  2   92   36    68 0.797  -0.88
 2.04 PlyA +  70496  70501    6                               1.05

 3.00 Prom +  70669  70708   40                              -6.65
 3.01 Init +  71040  71087   48  2  0   65   96    58 0.733   5.30
 3.02 Intr +  73097  73215  119  1  2   95   40    66 0.022   0.84
 3.03 Intr +  93169  93261   93  1  0   58   88    79 0.023   3.06
 3.04 Intr +  99982 100468  487  1  1   37  110   288 0.045  17.99
 3.05 Intr + 100809 100994  186  2  0   -3  119   101 0.545   3.06
 3.06 Term + 121116 122021  906  2  0  119   38  1226 0.848 112.00
 3.07 PlyA + 123427 123432    6                               1.05

 4.00 Prom + 124641 124680   40                              -7.55
 4.01 Sngl + 132025 132369  345  0  0   49   38   211 0.830   7.99
 4.02 PlyA + 132488 132493    6                               1.05

 5.03 PlyA - 133869 133864    6                               1.05
 5.02 Term - 142632 142451  182  1  2   66   42   132 0.514   3.19
 5.01 Init - 160540 160483   58  1  1   62   82    65 0.830   4.82
 5.00 Prom - 160590 160551   40                              -3.05

 6.00 Prom + 163860 163899   40                              -4.65
 6.01 Init + 167162 167266  105  1  0   73   95    18 0.057  -0.73
 6.02 Intr + 167877 167958   82  2  1  101   81    51 0.101   3.99
 6.03 Intr + 173694 174760 1067  1  2   51   89   773 0.710  62.76
 6.04 Intr + 185225 185399  175  1  1   82   84    87 0.642   6.29
 6.05 Term + 188730 188833  104  1  2   38   42    94 0.176  -2.74
 6.06 PlyA + 189387 189392    6                               1.05

 7.24 PlyA - 189990 189985    6                               1.05
 7.23 Term - 195901 195840   62  2  2  124   35    46 0.526  -0.11
 7.22 Intr - 204160 204091   70  1  1   59  108    28 0.004  -0.26
 7.21 Intr - 226744 226579  166  0  1   40  100    78 0.470   3.24
 7.20 Intr - 227955 227777  179  0  2   65  106    84 0.548   5.70
 7.19 Intr - 232487 232361  127  1  1   51  110    42 0.353   2.46
 7.18 Intr - 238301 238275   27  1  0  130   92     1 0.099   1.01
 7.17 Intr - 243398 243302   97  0  1   48   97    15 0.142  -3.45
 7.16 Intr - 244856 244667  190  2  1   73   87    83 0.962   4.94
 7.15 Intr - 248059 247796  264  1  0   71  111   240 0.979  21.39
 7.14 Intr - 249715 249578  138  1  0   66   95    43 0.812   2.54
 7.13 Intr - 253399 253297  103  0  1   41  103    78 0.807   3.86
 7.12 Intr - 254165 254075   91  0  1   87   69    13 0.403  -2.57
 7.11 Intr - 260511 260383  129  1  0   93  115     9 0.929   3.85
 7.10 Intr - 261771 261591  181  0  1  106   97   107 0.985  11.92
 7.09 Intr - 273118 272981  138  1  0   77   76   118 0.845   9.24
 7.08 Intr - 273815 273739   77  0  2   85   89    11 0.443  -0.78
 7.07 Intr - 274970 274865  106  2  1  123   63    55 0.586   5.37
 7.06 Intr - 276959 276873   87  2  0   76   84    62 0.933   3.85
 7.05 Intr - 279901 279754  148  0  1  106   41   188 0.999  15.22
 7.04 Intr - 282777 282582  196  1  1   81   71   200 0.973  15.15
 7.03 Intr - 284260 284196   65  0  2   68   77    44 0.220  -1.26
 7.02 Intr - 284710 284591  120  0  0   51   84    66 0.158   1.19
 7.01 Init - 293516 293344  173  2  2   65   37   132 0.221   4.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:86665146_86964352|GENSCAN_predicted_peptide_1|65_aa
MGIEERAFEILKNRTGQSPSFKSDNYLSGEVSVLAIRNKFEMDNFDIAARIEAGGEKTQV
GIKYK

>gi568815591f:86665146_86964352|GENSCAN_predicted_CDS_1|198_bp
atgggcatcgaggaaagggcttttgaaatattaaagaacagaactggtcaatctccgtca
ttcaagagtgataactatctgtcaggagaggtctcagtactggcaataaggaacaagttt
gaaatggacaactttgacattgcagccaggatagaggcagggggagaaaagacccaagtg
ggaatcaaatacaagtaa

>gi568815591f:86665146_86964352|GENSCAN_predicted_peptide_2|116_aa
MEKIRVYLSLQGVGRLIRTGKKVFDEAKMQQRNRECQVLTDLGGVGGEYPVLLRLCLFRK
VAKESRGEKRHQTGDSKEYLIGYKEPYLVLRQWEAFSPNLLTADIPAVDLHTPQYK

>gi568815591f:86665146_86964352|GENSCAN_predicted_CDS_2|351_bp
atggagaagataagagtttatttgagtcttcaaggagtaggaagacttataaggacaggg
aaaaaggtttttgatgaagcaaagatgcagcagcgaaatagggagtgtcaggttctaaca
gatctggggggagttggtggggagtatccagttttactgagactgtgtttatttaggaaa
gtagccaaagaaagtaggggggagaaaagacatcagactggggactccaaagaatacctg
ataggctataaggagccatatttagttctgagacagtgggaagccttcagtcctaactta
ttaacagcagatatacctgctgtagatctccacactcctcagtacaaataa

>gi568815591f:86665146_86964352|GENSCAN_predicted_peptide_3|612_aa
MVIVGEGVVKILMGRQKEQKMELDWKMSNSHMAQQVKSMDAFEQSQGEQNGIFTGLAREK
AFEKSSFYTRFMLTNLKLLLDFAAWKRGTETGFMKMLTRLQVLTLALFSKGFLLSLGDHN
FLRREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLP
GVKLGVHILDTCSRDTYALEQSLEFVRASLTKVDEAEYMCPDGSYAIQENIPLLIAGVIG
GSYSSVSIQVVSYPPPGIDHLAQECSLSDGRGARECKLSCTKLFQVSACFAPADIPLAKA
THRAQSRVKELVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEIL
RFFNWTYVSTVASEGDYGETGIEAFEQEARLRNICIATAEKVGRSNIRKSYDSVIRELLQ
KPNARVVVLFMRSDDSRELIAAASRANASFTWVASDGWGAQESIIKGSEHVAYGAITLEL
ASQPVRQFDRYFQSLNPYNNHRNPWFRDFWEQKFQCSLQNKRNHRRVCDKHLAIDSSNYE
QESKIMFVVNAVYAMAHALHKMQRTLCPNTTKLCDAMKILDGKKLYKDYLLKINFTGKPR
AFKHLLRCKQVK

>gi568815591f:86665146_86964352|GENSCAN_predicted_CDS_3|1839_bp
atggtgattgttggggaaggtgttgtcaagatcctcatgggaaggcagaaagaacagaaa
atggagctagactggaagatgtcaaattcacacatggctcagcaagtaaaaagtatggat
gcttttgaacaaagtcaaggagaacagaatggcatattcacaggattagctagagagaaa
gcttttgagaaatccagtttctacactcggtttatgctgacaaacctgaaacttctatta
gactttgcagcttggaagagaggtacagaaacaggattcatgaagatgttgacaagactg
caagttcttaccttagctttgttttcaaagggatttttactctctttaggggaccataac
tttctaaggagagagattaaaatagaaggtgaccttgttttagggggcctgtttcctatt
aacgaaaaaggcactggaactgaagaatgtgggcgaatcaatgaagaccgagggattcaa
cgcctggaagccatgttgtttgctattgatgaaatcaacaaagatgattacttgctacca
ggagtgaagttgggtgttcacattttggatacatgttcaagggatacctatgcattggag
caatcactggagtttgtcagggcatctttgacaaaagtggatgaagctgagtatatgtgt
cctgatggatcctatgccattcaagaaaacatcccacttctcattgcaggggtcattggt
ggctcttatagcagtgtttccatacaggttgtctcttatcctcctcctggaatcgatcat
ctagcccaggaatgttctctgagtgatggcagaggtgcaagagaatgcaaactcagctgt
acaaagctctttcaagtttctgcttgcttcgcacctgctgacatcccattagcaaaagca
actcacagggctcaatccagagtgaaggagctggtggcaaacctgctgcggctcttccag
atccctcagatcagctacgcatccaccagcgccaaactcagtgataagtcgcgctatgat
tactttgccaggaccgtgccccccgacttctaccaggccaaagccatggctgagatcttg
cgcttcttcaactggacctacgtgtccacagtagcctccgagggtgattacggggagaca
gggatcgaggccttcgagcaggaagcccgcctgcgcaacatctgcatcgctacggcggag
aaggtgggccgctccaacatccgcaagtcctacgacagcgtgatccgagaactgttgcag
aagcccaacgcgcgcgtcgtggtcctcttcatgcgcagcgacgactcgcgggagctcatt
gcagccgccagccgcgccaatgcctccttcacctgggtggccagcgacggctggggcgcg
caggagagcatcatcaagggcagcgagcatgtggcctacggcgccatcaccctggagctg
gcctcccagcctgtccgccagttcgaccgctacttccagagcctcaacccctacaacaac
caccgcaacccctggttccgggacttctgggagcaaaagtttcagtgcagcctccagaac
aaacgcaaccacaggcgcgtctgcgacaagcacctggccatcgacagcagcaactacgag
caagagtccaagatcatgtttgtggtgaacgcggtgtatgccatggcccacgctttgcac
aaaatgcagcgcaccctctgtcccaacactaccaagctttgtgatgctatgaagatcctg
gatgggaagaagttgtacaaggattacttgctgaaaatcaacttcacgggtaagccaaga
gcctttaaacatcttctcagatgcaaacaagtgaaataa

>gi568815591f:86665146_86964352|GENSCAN_predicted_peptide_4|114_aa
MWKRLWNWVTGRGWNSLEGSEEDRKMWESLELPRNLLNGFDQNADSNMDNEVQLELVSDG
DEELVGNWSKGNSCYVLAKRLAAFCPCPRDLWSFELERDDLGYLAEEISKQFKM

>gi568815591f:86665146_86964352|GENSCAN_predicted_CDS_4|345_bp
atgtggaagcgactttggaactgggtaacaggcagaggttggaacagtttggagggctca
gaagaagacaggaaaatgtgggaaagtttggaacttcctagaaacttgttgaatggtttt
gaccaaaatgctgatagtaatatggacaatgaagtccagcttgaattggtctcagatgga
gatgaggaacttgttgggaactggagcaaaggcaactcttgttatgttttagcaaagaga
ctggcagcattttgtccctgcccaagagatttgtggagctttgaacttgagagagatgat
ttagggtatctggcagaagaaatttctaagcagttcaaaatgtga

>gi568815591f:86665146_86964352|GENSCAN_predicted_peptide_5|79_aa
MNFPKTSTAAKHAVTEISMVLEVLARAIRREKEIKGTQLGKEEVKLSLFADDMIVYLENP
IISAQNPLKLISNFSKASG

>gi568815591f:86665146_86964352|GENSCAN_predicted_CDS_5|240_bp
atgaactttccgaagacaagcacagcagctaagcatgcagtaactgaaatttccatggtg
ttggaagttctggccagggcaatcaggcgagagaaagaaataaagggtactcaattagga
aaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatttagaaaacccc
atcatctcagcccaaaatccccttaagctgataagcaacttcagcaaagcctcaggataa

>gi568815591f:86665146_86964352|GENSCAN_predicted_peptide_6|510_aa
MARSQLTATPASRVQAILLPQPPKELGLQVCHHIQFGFFHAVATPVKGEVMYFSISDDAY
SHAPFNPNKDADSIVKFDTFGDGMGRYNVFNFQNVGGKYSYLKVGHWAETLSLDVNSIHW
SRNSVPTSQCSDPCAPNEMKNMQPGDVCCWICIPCEPYEYLADEFTCMDCGSGQWPTADL
TGCYDLPEDYIRWEDAWAIGPVTIACLGFMCTCMVVTVFIKHNNTPLVKASGRELCYILL
FGVGLSYCMTFFFIAKPSPVICALRRLGLGSSFAICYSALLTKTNCIARIFDGVKNGAQR
PKFISPSSQVFICLGLILVQIVMVSVWLILEAPGTRRYTLAEKRETVILKCNVKDSSMLI
SLTYDVILVILCTVYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSSDYRVQ
TTTMCISVSLSGFVVLGCLFAPKVHIILFQPQKNVVTHRLHLNRFSVSGTGTTYSQSETE
LIWKIHDAFTLIPGILAGSLSMLAPNEQVP

>gi568815591f:86665146_86964352|GENSCAN_predicted_CDS_6|1533_bp
atggcgcgatctcagctcactgcaacccctgcctcccgggttcaagcgattcttctgcct
cagcctcccaaggagctgggactacaggtgtgccaccacatccagtttggtttctttcat
gctgttgcaacaccagtgaaaggtgaagtgatgtatttttccatttctgatgatgcttac
tcccatgctccattcaacccaaataaagatgcagatagcatagtcaagtttgacactttt
ggagatggaatggggcgatacaacgtgttcaatttccaaaatgtaggtggaaagtattcc
tacttgaaagttggtcactgggcagaaaccttatcgctagatgtcaactctatccactgg
tcccggaactcagtccccacttcccagtgcagcgacccctgtgcccccaatgaaatgaag
aatatgcaaccaggggatgtctgctgctggatttgcatcccctgtgaaccctacgaatac
ctggctgatgagtttacctgtatggattgtgggtctggacagtggcccactgcagaccta
actggatgctatgaccttcctgaggactacatcaggtgggaagacgcctgggccattggc
ccagtcaccattgcctgtctgggttttatgtgtacatgcatggttgtaactgtttttatc
aagcacaacaacacacccttggtcaaagcatcgggccgagaactctgctacatcttattg
tttggggttggcctgtcatactgcatgacattcttcttcattgccaagccatcaccagtc
atctgtgcattgcgccgactcgggctggggagttccttcgctatctgttactcagccctg
ctgaccaagacaaactgcattgcccgcatcttcgatggggtcaagaatggcgctcagagg
ccaaaattcatcagccccagttctcaggttttcatctgcctgggtctgatcctggtgcaa
attgtgatggtgtctgtgtggctcatcctggaggccccaggcaccaggaggtataccctt
gcagagaagcgggaaacagtcatcctaaaatgcaatgtcaaagattccagcatgttgatc
tctcttacctacgatgtgatcctggtgatcttatgcactgtgtacgccttcaaaacgcgg
aagtgcccagaaaatttcaacgaagctaagttcataggttttaccatgtacaccacgtgc
atcatctggttggccttcctccctatattttatgtgacatcaagtgactacagagtgcag
acgacaaccatgtgcatctctgtcagcctgagtggctttgtggtcttgggctgtttgttt
gcacccaaggttcacatcatcctgtttcaaccccagaagaatgttgtcacacacagactg
cacctcaacaggttcagtgtcagtggaactgggaccacatactctcagtcagagactgag
ctgatctggaagatccatgatgctttcactcttattcctggcatcttggcaggaagcctg
tccatgttggctcctaatgagcaagttccataa

>gi568815591f:86665146_86964352|GENSCAN_predicted_peptide_7|977_aa
MKVPSGAASGFPGCSVRSEWLALREDVGRARDSGNSIGRLLSVLPRTLDFDLETAIHRLF
GQGVPAGQCQAAFSPCFSLSPVLVGGQSLEEAEVAGSCSRLHGSGHSRLAAAAISIALKA
FSCASGEYLEMKNQVCSKCGEGTYSLGSGIKFDEWDELPAGFSNIATFMDTVVGPSDSRP
DGCNNSSWIPRGNYIESNRDDCTVSLIYAVHLKKSGYVFFEYQYVDNNIFFEFFIQNDQC
QEMDTTTDKWVKLTDNGEWGSHSVMLKSGTNILYWRTTGILMGSKAVKPVLVKNITIEGV
AYTSECFPCKPGTFSNKPGSFNCQSCKIIDPFLKRFFYVAEEGSSECTERPPCTTKDYFQ
IHTPCDEEGKTQIMYKWIEPKICREDLTDAIRLPPSGEKKDCPPCNPGFYNNGSSSCHPC
PPGTFSDGTKECRPCPAGTEPALGFEYKWWNVLPGNMKTSCFNVGNSKCDGMNGWEVAGD
HIQSGAGGSDNDYLILNLHIPGFKPPTSMTGATGSELGRITFVFETLCSADCVLYFMVDI
NRKSTNVVESWGGTKEKQAYTHIIFKNATFTFTWAFQRTNQGQDNRRFINDMVKIYSITA
TNAVDGVASSCRACALGSEQSGSSCVPCPPGHYIEKETNQCKECPPDTYLSIHQVYGKEA
CIPCGPGSKNNQGKKMALCTNNITDFTVKEIVAGSDDYTNLVGAFVCQSTIIPSESKGFR
AALSSQSIILADTFIGVTVETTLKNINIKEDMFPVPTSQIPDVHFFYKTIYRQIIDIKCP
AGTCDGCTFYFLWESAEACPLCTEHDFHEIEGACKRGFQETLYVWNEPKWCIKGISLPEK
KLATCETVDFWLKVGAGVGAFTAVLLVALTCYFWKKNQKLEYKYSKLVMTTNSKECELPA
ADSCAIMEGEDNEEEVVYSNKQSLLGKLKSLATKTAIGVFGGPWSLGYVISCQYSETRSS
CIISVHAKNEILAIEEE

>gi568815591f:86665146_86964352|GENSCAN_predicted_CDS_7|2934_bp
atgaaggtgccaagtggagcagcatctggttttcctgggtgctctgtgagatctgaatgg
ctggcactcagggaggatgtgggaagggccagagattctggcaactcaatcggccggctg
ctctctgtcctaccaaggactctggactttgacctggagacagccattcacaggctgttc
ggtcaaggagtgcctgcaggccagtgccaagctgccttcagcccctgcttcagtctctct
cctgtgcttgttggtggccaaagtctggaggaggctgaggtggcaggaagctgtagccgg
cttcatggcagtggtcactccaggctggctgctgctgccatcagtatagcccttaaagct
ttctcctgtgcttctggagagtatctagaaatgaagaaccaggtatgcagtaagtgtggt
gaaggcacctattccttgggcagtggcatcaaatttgatgaatgggatgaattgccggca
ggattttctaacatcgcaacattcatggacactgtggtgggcccttctgacagcaggcca
gacggctgtaacaactcttcttggatccctcgtggaaactacatagaatctaatcgtgat
gactgcacggtgtctttgatctatgctgtgcaccttaagaagtcaggctatgtcttcttt
gagtaccagtatgtcgacaacaacatcttctttgagttctttattcaaaatgatcagtgc
caggagatggacaccaccactgacaagtgggtaaaacttacagacaatggagaatggggc
tctcattctgtaatgctgaaatcaggcacaaacatactctactggagaactacaggcatc
cttatgggttctaaggcggtcaagcctgtgctggtaaaaaatatcacaattgaaggggtg
gcgtacacatcagaatgttttccttgcaagccaggcacattcagcaacaaaccaggttca
ttcaactgccagagttgcaaaataattgacccatttctgaaacgctttttttatgttgca
gaggaaggatccagtgagtgtacagagcgccctccctgtaccacaaaagactatttccag
atccatactccatgtgatgaagaaggaaagacacagataatgtacaagtggatagagccc
aaaatctgccgggaggatctcacagatgctattagattgcccccttctggagagaagaag
gattgtccgccttgcaaccctggattttataacaatggatcatcttcttgccatccctgt
cctcctggaacattttcagatggaaccaaagaatgtagaccatgtccagcaggaacggag
cctgcacttggctttgaatataaatggtggaatgtccttcctggcaacatgaaaacttcc
tgcttcaatgttgggaattcaaagtgcgatggaatgaatggttgggaggtggctggagat
catatccagagtggggctggaggttctgacaatgattacctgatcttaaacttgcatatc
ccaggatttaaaccaccaacatctatgactggagccacgggttctgaactaggaagaata
acatttgtctttgagaccctctgttcagctgactgtgttttgtacttcatggtggatatt
aatagaaaaagtacaaatgtggtagaatcgtggggtggaaccaaagaaaaacaagcttac
acccatatcatcttcaagaatgcaacttttacatttacatgggcattccagagaactaat
cagggtcaagataatagacggttcatcaatgacatggtgaagatttattctatcacagcc
actaatgcagttgatggggtggcgtcctcatgccgtgcctgtgccctcggttctgaacag
tcgggttcatcgtgtgtcccctgccctccaggccactacattgagaaagaaaccaaccag
tgcaaggaatgtccacctgacacctacctgtccatacatcaggtctatggcaaagaggct
tgtattccatgcgggcctgggagtaaaaacaatcaggggaagaagatggctctctgtacc
aacaatataacagactttacagtaaaagaaatagtggcagggtcagatgattacacaaat
ttggtaggggcatttgtatgccagtcaacaattattccttctgaaagtaagggtttccga
gcagccttatcatcacaatccatcattctggcagatacattcataggagtcacagttgaa
accacattgaaaaatattaatataaaagaagatatgttcccagttccaacaagccaaata
ccagatgtgcatttcttttataaaacaatttatagacagataatagatatcaagtgccca
gcaggtacctgtgatgggtgtacgttctatttcctgtgggagagtgctgaagcttgccct
ctgtgtacggagcatgacttccatgagattgagggagcctgcaagagaggatttcaggaa
accttgtatgtgtggaatgaacctaaatggtgcattaaaggaatttctttgcctgagaaa
aagttggcaacctgtgaaacggttgacttttggctgaaggtgggagccggtgtgggagct
tttactgccgttttgctggtggctctgacctgctacttctggaaaaagaatcaaaaactg
gaatacaaatattccaagttagtaatgacgactaactcaaaagagtgtgaactcccggct
gcagacagttgtgctatcatggaaggagaagataatgaagaggaagttgtatattccaat
aaacagtcactactaggaaaactcaaatctttggcaaccaagactgctatcggtgttttt
ggtggcccctggagcttaggatatgtcatatcctgtcagtactctgagacaagatcaagt
tgtattatttctgtgcatgctaaaaatgaaattttagcgattgaagaggaataa