GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:15:14

Sequence gi568815596f:203836815_204057883 : 221069 bp : 40.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4939   4978   40                              -2.25
 1.01 Init +   7477   7589  113  0  2   76   49    83 0.080   2.93
 1.02 Intr +  12252  12378  127  0  1   62   47   119 0.162   4.96
 1.03 Intr +  12616  12781  166  0  1   29   68   106 0.218   1.31
 1.04 Term +  15819  15892   74  1  2   64   47    77 0.118  -1.71
 1.05 PlyA +  16837  16842    6                               1.05

 2.05 PlyA -  17001  16996    6                               1.05
 2.04 Term -  17362  17186  177  1  0    0   41   168 0.568   0.00
 2.03 Intr -  17615  17438  178  1  1   37   86    93 0.709   3.00
 2.02 Intr -  21023  20885  139  0  1   10  108    65 0.468  -0.70
 2.01 Init -  22017  21954   64  0  1   49   38   129 0.604   5.36
 2.00 Prom -  27985  27946   40                              -4.55

 3.00 Prom +  31016  31055   40                              -5.35
 3.01 Init +  31129  31237  109  0  1   85  113     8 0.392   3.68
 3.02 Intr +  33772  34119  348  2  0   60   85   402 0.370  31.50
 3.03 Intr +  34564  34673  110  2  2  105  101     6 0.898   2.68
 3.04 Term +  35894  35998  105  1  0   89   54    79 0.916   2.03
 3.05 PlyA +  36279  36284    6                              -1.75

 4.02 PlyA -  36420  36415    6                               1.05
 4.01 Sngl -  39032  38733  300  2  0   61   48   291 0.739  17.94
 4.00 Prom -  39606  39567   40                              -7.15

 5.15 PlyA -  39868  39863    6                               1.05
 5.14 Term -  41773  41525  249  1  0   27   37   160 0.026  -0.48
 5.13 Intr -  48150  48079   72  0  0   69   53    92 0.103   2.48
 5.12 Intr -  52742  52677   66  2  0   83   42    76 0.061   0.68
 5.11 Intr -  55608  55358  251  1  2   85    0   162 0.111   3.33
 5.10 Intr -  69498  69459   40  0  1  105   48    75 0.042   2.08
 5.09 Intr -  74691  74488  204  0  0   59   53   114 0.589   3.47
 5.08 Intr -  78731  78520  212  0  2   21   79   213 0.444  11.41
 5.07 Intr -  80594  80447  148  2  1   78   35    68 0.744  -0.61
 5.06 Intr -  81693  81544  150  0  0   84  107    70 0.914   7.94
 5.05 Intr -  98979  98929   51  0  0   92   92    44 0.489   3.39
 5.04 Intr - 103799 103703   97  1  1   23   93    89 0.501   1.99
 5.03 Intr - 106470 106320  151  1  1   64   88    99 0.009   5.80
 5.02 Intr - 107669 107561  109  2  1   -2  105    92 0.012   0.84
 5.01 Init - 119914 119828   87  1  0   82   95    41 0.082   4.89
 5.00 Prom - 125265 125226   40                              -6.15

 6.04 PlyA - 125939 125934    6                               1.05
 6.03 Term - 128569 128372  198  1  0   31   43   191 0.680   5.32
 6.02 Intr - 130185 129863  323  1  2   78   19   161 0.429   2.85
 6.01 Init - 132750 132648  103  0  1   87   78   109 0.881  10.25
 6.00 Prom - 142864 142825   40                              -4.55

 7.00 Prom + 145302 145341   40                              -6.95
 7.01 Init + 146736 146832   97  2  1   77   68    66 0.845   4.02
 7.02 Term + 148464 148570  107  1  2  110   48    76 0.957   3.39
 7.03 PlyA + 148779 148784    6                               1.05

 8.00 Prom + 154567 154606   40                              -5.35
 8.01 Init + 162620 162737  118  1  1   82   92   115 0.994  11.71
 8.02 Term + 164980 165032   53  2  2  121   48    72 0.959   3.11
 8.03 PlyA + 166476 166481    6                               1.05

 9.06 PlyA - 168076 168071    6                               1.05
 9.05 Term - 178124 178007  118  1  1   92   49   118 0.366   5.33
 9.04 Intr - 205066 204994   73  2  1   60   80    46 0.086  -1.45
 9.03 Intr - 206991 206909   83  2  2  124   90    17 0.654   3.86
 9.02 Intr - 210912 210804  109  1  1   46  105    47 0.482   0.62
 9.01 Intr - 214226 214020  207  0  0   19   83   234 0.594  14.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_1|159_aa
MREKEEGKDCMEKVDLHQVNEKQGSSGRRRKSKFQRASSMFLPPSVMVSLKELDCLNTPQ
NITLIYYIDNITMIGQVEQEMIWKAASFEYCSEQERAPQQVQAVVQHPVLFGSCNLADPI
VSKASVVEKMQCGVYELSGIDPNVRCHTKKNDVSEKHSE

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_1|480_bp
atgagggaaaaggaagaggggaaagactgcatggaaaaagtagatcttcatcaggttaat
gaaaaacagggcagctcaggcagaaggagaaaatcaaagtttcagagagcctcgtctatg
tttctgccaccctctgtgatggtgagtctgaaggaactggactgcctgaacaccccacag
aacatcactctgatctattacattgacaacatcacgatgattggacaagttgagcaagag
atgatatggaaggctgccagctttgagtactgttcagagcaggaaagggcaccacagcag
gtccaggctgtggtgcagcaccctgtgctatttgggtcatgtaatctggcagatcctatt
gtgtcaaaggcatcagtggtagaaaagatgcagtgtggagtatatgagctctctgggatt
gatccaaatgtcagatgtcacaccaagaaaaatgatgtttctgagaagcattcagaataa

>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_2|185_aa
MTAWRYEISFSGNENALEQHSEMLTSRKHQKHVFPVLLKYKQVKKLPSNASPAFHPLDKI
DNCEHENKTAAEYQAPLGDQSRCDDKLLPGIIRITALEPKEKITHTGRHIEHKKETRQAA
GYVFIGKRKELVRARQPREPKQKLSPLRSKQKGPWKSWALPDYGGSPVAISKTRSHVRAQ
RCEMH

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_2|558_bp
atgactgcttggcggtatgagatttccttttcgggtaatgaaaacgctctggagcagcat
agtgaaatgctgacaagtagaaaacaccagaaacatgtgtttcctgtgctcttaaaatat
aagcaggtcaagaagcttccatcaaatgcatctcctgcatttcatcctttggataaaata
gacaattgtgagcatgagaacaagactgcagccgagtatcaggcccccctgggggatcag
agcaggtgtgatgacaaacttttaccaggcataattcgaataaccgcactagaacctaaa
gaaaagataacgcatacaggcaggcatatagagcacaagaaggaaaccaggcaggcagct
ggatacgtcttcattgggaagcgaaaagaactggtcagagcaaggcagccaagagagcca
aagcagaaactcagtcctctcagatccaagcaaaagggaccgtggaaaagctgggcctta
cctgactatggaggcagtccagtggccatttccaagaccaggagccatgtgagagctcag
cgatgtgaaatgcactga

>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_3|223_aa
MACLGFQRHKAQLNLATRTWPCTLLFFLLFIPVFCKAMHVAQPAVVLASSRGIASFVCEY
ASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTSSGNQVNLTIQGLR
AMDTGLYICKVELMYPPPYYLGIGNGTQIYVIDPEPCPDSDFLLWILAAVSSGLFFYSFL
LTAVSLSKMLKKRSPLTTGVYVKMPPTEPECEKQFQPYFIPIN

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_3|672_bp
atggcttgccttggatttcagcggcacaaggctcagctgaacctggctaccaggacctgg
ccctgcactctcctgttttttcttctcttcatccctgtcttctgcaaagcaatgcacgtg
gcccagcctgctgtggtactggccagcagccgaggcatcgccagctttgtgtgtgagtat
gcatctccaggcaaagccactgaggtccgggtgacagtgcttcggcaggctgacagccag
gtgactgaagtctgtgcggcaacctacatgatggggaatgagttgaccttcctagatgat
tccatctgcacgggcacctccagtggaaatcaagtgaacctcactatccaaggactgagg
gccatggacacgggactctacatctgcaaggtggagctcatgtacccaccgccatactac
ctgggcataggcaacggaacccagatttatgtaattgatccagaaccgtgcccagattct
gacttcctcctctggatccttgcagcagttagttcggggttgtttttttatagctttctc
ctcacagctgtttctttgagcaaaatgctaaagaaaagaagccctcttacaacaggggtc
tatgtgaaaatgcccccaacagagccagaatgtgaaaagcaatttcagccttattttatt
cccatcaattga

>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_4|99_aa
MGSSRNASTMLKKRHEQRRVLGAMLEEELTLEPLATLSGSLVIHSLACDKWFQGGGLQRP
GSPCMVGQAPFGFMDYLGLELPQDPDPRNGDDDEGWNPM

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_4|300_bp
atgggaagtagcaggaatgcgagtaccatgctgaagaagagacatgagcagaggcgtgtg
ctaggagccatgttggaggaggaactgactctggagcccctggccactctatccggctcc
cttgtcatccacagtcttgcctgtgacaagtggttccaaggaggagggttgcaacgccca
ggctccccctgcatggtaggccaagccccttttgggttcatggattatttgggcttggag
ctgccccaggaccctgatcccagaaatggagatgatgatgaaggttggaatcccatgtga

>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_5|628_aa
MQTTTKAAHPMGNQNFSWQQSCDSGLEKKSKRKDSRERETLLSQTHTLTGEAERLFVEKF
PTLSGAPTQMRRNQKTNSGNMTKQGSSTPPKNHTSSPAMDPNQEEILHLPEKEFRRSQQT
VEEYLQPLRRKAAIQDSYSQERYQSLIKMRKTEAQTGNEPGPSHILLEFWLETEGREESE
AGVFVPKATFLQNHSSFQGAFSHSYGDPCSSAWVLNKLDYPQYGLNPVPLKIPMLKLQVP
VPQNVTVFGDKGFKEIMKVKCDHMDPVPRNSSSEIQLDFKIEKLDSLHRLFAWLQTVEAT
VLPSERRVVQCRDEELAAETGLSGLNQASQSLELQISSGIRSHRSRNPIVNCTCEESRLC
APYENPVLDDLRQNSFFLKLSLLQPLTFVENLSSMKPVPGAKKFRLFQNVVSLEAHRHLI
IAHSTLGPFNPNQSFIRAAHLYAMQSSGGTTEDAQLCPDTPETLSVPYESDSPFLLIPLT
VSPCCHFDEHMRLYPLRLLRDTVRRSSPDTGPSILDFLVFRIQPAPAETPTSTRSKTKRE
NNHQSPQGEEKSYQWDACCTANMTRWKQEENDKQEEKGDDVLQESAAHEKSSVLSSKICD
HPLKYISYNSSQRKLLLFVQIDSITLCD

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_5|1887_bp
atgcagactacaacaaaggctgcacatcctatgggtaaccagaacttcagctggcaacaa
agttgtgattctggattggaaaaaaagtcaaaaagaaaagactcacgggaaagggagacc
ctcctctcccaaacacacactctgaccggagaagctgagcgtctgtttgtggagaagttt
ccgactttatctggagcacctacccaaatgagaaggaaccagaaaaccaactctggtaat
atgacaaaacaaggctcttcaacacccccaaaaaatcacactagttcaccagcaatggat
ccaaaccaagaagaaattcttcatctacctgaaaaagaattcaggagaagccagcagaca
gtggaggaatatctgcaaccactaagaagaaaggctgccatccaggactcctattcccag
gaaagatatcagtcactcatcaagatgaggaaaactgaggcacagacaggtaacgaacct
ggcccaagtcatatactgctggagttctggctggagacggaagggcgggaggaaagtgag
gctggagtgtttgttcccaaggcgaccttcctgcaaaaccacagctcctttcagggagcc
ttctcgcacagctacggcgacccttgcagctctgcctgggttctgaacaaattagattac
ccacaatatgggctgaatcctgtccccctcaaaattcctatgttgaaattacaagtccca
gtacctcagaatgtgactgtatttggagataagggctttaaagagataatgaaggtaaaa
tgcgatcatatggacccagtgcccaggaattcttccagtgaaatccaacttgatttcaaa
atagaaaaactggattcccttcacagactctttgcttggctacaaactgttgaagcaacc
gtgcttccttcagagaggcgggttgtccagtgcagagatgaagagctggctgcagagaca
ggcctttcgggtttgaatcaggcttcgcagtctctcgagctgcagatcagcagcggcatt
agatcccataggagcaggaaccctattgtgaactgcacgtgcgaggaatctaggttgtgc
gctccttatgagaatccagtgcttgatgatctgaggcagaacagtttcttcctaaaacta
tccctcctccaaccccttacattcgtggaaaatttgtcttccatgaaaccggtccctggt
gccaaaaagtttcgccttttccagaatgtcgtatctttggaagcacacagacatttgatc
attgcccactctaccctggggccattcaatcccaaccagtcatttataagagctgcacac
ttgtatgccatgcaatcttcaggaggcaccactgaggacgcacagctatgtcctgacaca
ccagagaccctctcagtcccatatgagtcggattcacccttccttctaattcctttgacc
gtctccccttgctgccattttgatgagcacatgcgtttatatccattacggttgttgagg
gacacagtaagaaggtcctcaccagataccggtccttctatcttggacttcttagtcttc
cgaattcaacctgcaccagcagaaactcctacttctacaaggtctaagacgaaacgggaa
aacaaccaccaaagcccacaaggtgaagagaaaagctaccagtgggatgcatgctgcacg
gctaacatgacaaggtggaagcaggaagaaaatgacaagcaggaagaaaaaggtgatgat
gtccttcaggaaagtgctgctcatgagaagtcatctgtgttatcttctaaaatttgcgat
catcccctgaaatatatttcttacaattcctctcagaggaagctgcttctttttgtccaa
atagatagtattactttgtgtgattaa

>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_6|207_aa
MVLSCDECGLHEEKDITRQRTLVVRIQAKTPTEGETKETHFIRGPKTPAPVTDWEGSLPL
VFNHCRDTSLIIHPCFRGVRPRRDACLGPSCLAASPTFLGEGQVPQPLLCLYPFSAFLGG
KKPPTTSPSPLAASPTFLGEEQELATSARNLATRPRNACSPGFLLSRVPSVRDPTGNRTV
PLTLAATPRAPGTLAQGSLTPSQTFLA

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_6|624_bp
atggtcctctcttgtgacgaatgtggacttcatgaagaaaaagacataacaaggcagaga
acattagttgtcagaattcaagctaagactcctacagaaggagagacaaaggagacacat
tttatccgtggacccaaaactccggcaccggtcacggactgggaaggcagccttcccttg
gtgtttaatcattgcagggacacctctctgattattcacccatgtttcagaggtgtcaga
ccacgcagggatgcctgccttggtccttcatgcttagcggcaagtcccacttttctgggg
gaggggcaagtaccccaaccccttctgtgtctctaccccttctccgcctttctggggggc
aagaaacccccgaccacttctccttcacccttagcggcaagtcccacttttctaggggag
gagcaagagcttgctacaagtgccagaaatctggccaccaggccaaggaatgcctgcagc
ccaggattcctcctaagccgcgtcccatctgtgcgggaccccactggaaatcggactgtc
ccactcaccttggcagccactcccagagcccctggaactctggcccaaggctctctgact
ccttcccagaccttcttggcttag

>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_7|67_aa
MHSDFQLVLTFLKCSCDPDASETPAGWYPLLRGVISKAFLITILNTKLPQADFMENPTCN
ASSAAYF

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_7|204_bp
atgcattctgatttccagttggttcttacattcctgaaatgcagctgtgatccagatgcc
tcagaaacaccagctggttggtatcctctcctcagaggtgtgatctcaaaggccttccta
ataaccatcctgaatactaagctgccccaagcagacttcatggagaacccaacctgtaac
gccagctcagcggcttacttctga

>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_8|56_aa
MVPDLKNKYVYLNVIDGGAQGMSESSREGDIREEKLEKEGKEPVVLQLVSLECELD

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_8|171_bp
atggtgcctgacctgaagaacaaatatgtgtacctaaatgtcatagatggaggtgcacag
ggaatgagtgaatcttccagagagggagatatcagggaggaaaagcttgaaaaggaaggc
aaggagccagttgtactacagctggtgtctcttgagtgtgagctagattga

>gi568815596f:203836815_204057883|GENSCAN_predicted_peptide_9|196_aa
XHNELDGLGEQVVETTQIGTPRGDVHMIGSEKKHKAAQRYYFSVWHPHLKQLQNKPQLGN
VARFQQRGGERQELHGQILCKVLSKVADMPGLECIVSRGRAQRRKRPTIISSSTRAITPS
PRVTASPSKLRSTGRLLGRQGPNLFSHHRIPSAYHGAWELKLQNKLPPRNLDSQGIQRDI
TKICFSGTEAAEALNW

>gi568815596f:203836815_204057883|GENSCAN_predicted_CDS_9|591_bp
ngacataatgagctggatggattgggagagcaggtcgttgaaactacacagattgggaca
cccaggggggatgtccacatgatcgggtcagagaaaaagcacaaggcagctcagaggtat
tacttctcagtatggcatccccatttgaaacagctgcaaaacaagccacagcttgggaat
gtggcaaggtttcagcagcgtggaggtgaaaggcaagagttgcatggacagattctctgc
aaggtgctgagcaaggtagcagacatgccaggtcttgagtgcattgtgtctagaggtaga
gcacagaggaggaaaaggcctaccataatcagttcttccactagggctataaccccaagc
cccagagttactgcttctccatcaaaattgagatccacaggaagattattaggaaggcaa
ggaccaaatctgttttctcaccatcgaatccccagtgcctatcacggtgcatgggaactg
aagttgcagaacaaactgccaccaagaaatctggacagtcagggcatccagagagacata
accaagatctgcttctctggaacagaagctgctgaagccctgaattggtag