GENSCAN 1.0	Date run:  3-Nov-116	Time: 15:35:58

Sequence gi568815594r:163371857_163573734 : 201878 bp : 37.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1645   1811  167  1  2   90   58    72 0.053   3.08
 1.02 Term +  32904  33172  269  1  2   56   44   218 0.451   8.87
 1.03 PlyA +  34067  34072    6                               1.05

 2.00 Prom +  39760  39799   40                              -5.55
 2.01 Sngl +  42910  43434  525  0  0   33   43   230 0.632   8.83
 2.02 PlyA +  44475  44480    6                               1.05

 3.00 Prom +  44944  44983   40                              -7.15
 3.01 Init +  54001  54239  239  0  2   55   73   146 0.615   7.34
 3.02 Intr +  54554  54624   71  2  2   53   69    65 0.732  -0.99
 3.03 Intr +  55096  55182   87  2  0   48   92   100 0.923   5.42
 3.04 Intr +  56722  56856  135  2  0   58   52   110 0.083   4.02
 3.05 Intr +  57639  57881  243  1  0   62   88    66 0.040   0.55
 3.06 Term +  80131  80324  194  2  2   46   47   153 0.066   3.60
 3.07 PlyA +  80416  80421    6                               1.05

 4.00 Prom +  89289  89328   40                              -3.65
 4.01 Sngl +  91313  91501  189  1  0   42   39   180 0.527   3.36
 4.02 PlyA +  92234  92239    6                               1.05

 5.02 PlyA -  93293  93288    6                               1.05
 5.01 Sngl - 101875  99998 1878  1  0   80   37  1927 0.605 180.49
 5.00 Prom - 110981 110942   40                              -6.55

 6.10 PlyA - 111463 111458    6                               1.05
 6.09 Term - 122880 122729  152  1  2   26   43   178 0.989   4.19
 6.08 Intr - 123040 122900  141  2  0  112   89   197 0.999  21.60
 6.07 Intr - 126393 126281  113  2  2   46   97    70 0.444   2.80
 6.06 Intr - 150233 150125  109  0  1   57   94    80 0.122   3.92
 6.05 Intr - 151324 151100  225  2  0   81   87    89 0.030   5.13
 6.04 Intr - 157190 156948  243  0  0   84   56   129 0.044   5.85
 6.03 Intr - 165251 165180   72  0  0   60   98    79 0.478   4.56
 6.02 Intr - 172727 172580  148  2  1   76   50   175 0.873  11.39
 6.01 Init - 186641 186507  135  2  0   73   60    84 0.302   4.29

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 143457 143605  149  0  2  104   50   132 0.958   9.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:163371857_163573734|GENSCAN_predicted_peptide_1|145_aa
XYIQPVNFSGKAIDFEPAQAWISISPESFKRCITLAQRTHSSEPQYLHLLNRDKSNGSSG
ATIDFCLSFPVCGILLQQQPYQKEYAFPTPQYCQHSVALVLFPAISNKLSLFLMIAHASY
IGDASIQQEPAGFATLLKLSRRTFE

>gi568815594r:163371857_163573734|GENSCAN_predicted_CDS_1|438_bp
nngtacattcagccagtgaattttagtggaaaggccatcgactttgaaccagcacaggcc
tggattagtatttcaccagagtcattcaaaagatgtataaccttagcccaacggactcat
tcttccgaacctcagtatcttcacctattaaacagggataaaagcaatggaagttccggt
gcaacaatcgatttctgtttaagcttcccagtttgtggtattttgctacagcagcagccc
tatcagaaagaatacgccttccccactccacaatactgccagcattctgtggcattggtg
ctgtttcctgcaataagcaataaactcagccttttcttaatgatagctcatgctagttat
attggagatgccagcattcagcaagagcctgctggatttgccactcttttaaagctgtca
agaagaacttttgaataa

>gi568815594r:163371857_163573734|GENSCAN_predicted_peptide_2|174_aa
MPSQKFPAGAGHLWRAFARAVQKGNIGLEAPHRVPTEAPPIGAVRRGPLSSRPQNGRSTN
SLPRLPGKATDTQRQPMKAAREETVPCKATGAELPKTIGTHLLHQHDLDVRPGVKGDHFG
ALKFDYPPGFWTCMGTVTTSFCPISPIWNGCIYPMPVLPLYLGSNQFAFNFTGS

>gi568815594r:163371857_163573734|GENSCAN_predicted_CDS_2|525_bp
atgcccagtcagaagttccctgcaggggcagggcacttatggagagcctttgctagggca
gtgcagaagggaaatatagggttggaggccccacacagagtccctactgaggcaccacct
attggagctgtgagaagagggccactgtcctccagaccccagaatggtagatccactaac
agcttgccccgtttgcctggaaaagccacagacactcaacgccagcccatgaaagcagcc
agggaggagactgtaccctgcaaagccacaggggcagagctgcccaagaccataggaacc
cacctcttgcatcagcatgatctggacgtgagacctggagtcaaaggagatcattttgga
gctttaaaatttgactaccctcctggattttggacttgcatgggaactgtaaccacttcg
ttttgtccaatttctcccatttggaatggctgtatttacccaatgcctgtactcccattg
tatttaggaagtaaccagtttgctttcaattttacaggctcatag

>gi568815594r:163371857_163573734|GENSCAN_predicted_peptide_3|322_aa
MRQSLEGAFPQRTKFLWTRSPQPDDPTTGLRVPGQAPAHVITLTQPRVHLTIEGQEIDFL
LDTGVAFSVLVSCPGQLSSRETGIALGVLTQTRGTTPQPVAYLRISAQLAELVILTRALT
LGKGRRINVYTDIALRAATFTARVCSFIPEVSKPTNPLGGTNNSGHANFKSCNIHCEDIP
DDIDGCFKAYKLHTFRTLVLVCFCIATKKYTRLGNLQRKRFNWLMVLQAIQEAWCQHLLS
FWEGLMELLLMAEGEAGAGNLEEMDKFLEIYNPPRLNQEEIETLNRPITSSKIEMVILKV
QDQMDSQLNSMRHSEKNWYQSY

>gi568815594r:163371857_163573734|GENSCAN_predicted_CDS_3|969_bp
atgaggcaatcactggaaggagcatttccccagaggacaaagtttctctggaccagaagc
ccccaaccagatgatccaacaacaggactgagggtgccagggcaagcgccagctcatgtc
atcaccctcactcagccccgggtacatttaaccattgagggccaggaaattgacttcctt
ctggacactggcgtggctttctcagtgttagtctcctgtcctggacagctgtcctcaaga
gagacaggaatagctcttggggtccttactcagactcgtgggacaaccccacaaccagtg
gcatatctaagaatcagtgcccagttagcagaactagtgatacttacccgagccttaaca
ctgggaaagggaagaagaataaatgtgtatacagatatagctttacgagctgcaacattc
actgcaagggtctgcagcttcattcctgaagtcagcaagcccacgaacccactgggagga
acaaacaactccggacatgccaactttaagagctgtaacattcactgcgaagacattcct
gatgacattgatggttgctttaaggcttacaaattgcacacttttaggactcttgtgtta
gtctgcttttgcattgctacaaagaaatacacaagactgggtaatttacaaagaaagagg
tttaattggctcatggttctgcaggctatacaggaagcatggtgccagcatctgctcagc
ttctgggaaggcctcatggagcttttactcatggcagaaggcgaagcaggagcaggaaac
ctagaggaaatggataaattcctggaaatatacaaccctcctagattaaaccaggaagaa
atagaaactctgaacagaccaataacaagcagcaagattgaaatggtaattttaaaagtc
caggaccagatggattcacagctgaattctatgagacattcagagaagaattggtaccaa
tcctattga

>gi568815594r:163371857_163573734|GENSCAN_predicted_peptide_4|62_aa
MKDNIGNDDRGIPKQISFRNKNMDFRTWKQTHLKSSMPTYQDPSKVGLPQFEDCELHSLE
AL

>gi568815594r:163371857_163573734|GENSCAN_predicted_CDS_4|189_bp
atgaaagacaatattggaaatgatgacaggggtattcccaaacagatcagttttagaaac
aaaaacatggacttcaggacctggaagcagacgcacttaaaatcttccatgccgacatac
caagatccttccaaagtaggcctacctcagtttgaagactgtgaacttcactcgctagaa
gcactttaa

>gi568815594r:163371857_163573734|GENSCAN_predicted_peptide_5|625_aa
MANDAKPDVKTVQVLRDTANRLRIHSIRATCASGSGQLTSCCSAAEVVSVLFFHTMKYKQ
TDPEHPDNDRFILSRGHAAPILYAAWVEVGDISESDLLNLRKLHSDLERHPTPRLPFVDV
ATGSLGQGLGTACGMAYTGKYLDKASYRVFCLMGDGESSEGSVWEAFAFASHYNLDNLVA
VFDVNRLGQSGPAPLEHGADIYQNCCEAFGWNTYLVDGHDVEALCQAFWQASQVKNKPTA
IVAKTFKGRGIPNIEDAENWHGKPVPKERADAIVKLIESQIQTNENLIPKSPVEDSPQIS
ITDIKMTSPPAYKVGDKIATQKTYGLALAKLGRANERVIVLSGDTMNSTFSEIFRKEHPE
RFIECIIAEQNMVSVALGCATRGRTIAFAGAFAAFFTRAFDQLRMGAISQANINLIGSHC
GVSTGEDGVSQMALEDLAMFRSIPNCTVFYPSDAISTEHAIYLAANTKGMCFIRTSQPET
AVIYTPQENFEIGQAKVVRHGVNDKVTVIGAGVTLHEALEAADHLSQQGISVRVIDPFTI
KPLDAATIISSAKATGGRVITVEDHYREGGIGEAVCAAVSREPDILVHQLAVSGVPQRGK
TSELLDMFGISTRHIIAAVTLTLMK

>gi568815594r:163371857_163573734|GENSCAN_predicted_CDS_5|1878_bp
atggccaacgacgccaagcccgacgtgaagaccgtgcaggtgctgcgggacacagccaac
cgcctgcggatccattccatcagggccacgtgtgcctctggttctggccagctcacgtcg
tgctgcagtgcagcggaggtcgtgtctgtcctcttcttccacacgatgaagtataaacag
acagacccagaacacccggacaacgaccggttcatcctctccaggggacatgctgctcct
atcctctatgctgcttgggtggaggtgggtgacatcagtgaatctgacttgctgaacctg
aggaaacttcacagcgacttggagagacaccctaccccccgattgccgtttgttgacgtg
gcaacagggtccctaggtcagggattaggtactgcatgtggaatggcttatactggcaag
taccttgacaaggccagctaccgggtgttctgccttatgggagatggcgaatcctcagaa
ggctctgtgtgggaggcttttgcttttgcctcccactacaacttggacaatctcgtggcg
gtcttcgacgtgaaccgcttgggacaaagtggccctgcaccccttgagcatggcgcagac
atctaccagaattgctgtgaagcctttggatggaatacttacttagtggatggccatgat
gtggaggccttgtgccaagcattttggcaagcaagtcaagtgaagaacaagcctactgct
atagttgccaagaccttcaaaggtcggggtattccaaatattgaggatgcagaaaattgg
catggaaagccagtgccaaaagaaagagcagatgcaattgtcaaattaattgagagtcag
atacagaccaatgagaatctcataccaaaatcgcctgtggaagactcacctcaaataagc
atcacagatataaaaatgacctccccacctgcttacaaagttggtgacaagatagctact
cagaaaacatatggtttggctctggctaaactgggccgtgcaaatgaaagagttattgtt
ctgagtggtgacacgatgaactccaccttttctgagatattcaggaaagaacaccctgag
cgtttcatagagtgtattattgctgaacaaaacatggtaagtgtggcactaggctgtgct
acacgtggtcgaaccattgcttttgctggtgcttttgctgccttttttactagagcattc
gatcagctccgaatgggagccatttctcaagccaatatcaaccttattggttcccactgt
ggggtatccactggagaagatggagtctcccagatggccctggaggatctagccatgttc
cgaagcattcccaattgtactgttttctatccaagtgatgccatctcgacagagcatgct
atttatctagccgccaataccaagggaatgtgcttcattcgaaccagccaaccagaaact
gcagttatttataccccacaagaaaattttgagattggccaggccaaggtggtccgccac
ggtgtcaatgataaagtcacagtaattggagctggagttactctccatgaagccttagaa
gctgctgaccatctttctcaacaaggtatttctgtccgtgtcatcgacccatttaccatt
aaacccctggatgccgccaccatcatctccagtgcaaaagccacaggcggccgagttatc
acagtggaggatcactacagggaaggtggcattggagaagctgtttgtgcagctgtctcc
agggagcctgatatccttgttcatcaactggcagtgtcaggagtgcctcaacgtgggaaa
actagtgaattgctggatatgtttggaatcagtaccagacacattatagcagccgtaaca
cttactttaatgaagtaa

>gi568815594r:163371857_163573734|GENSCAN_predicted_peptide_6|445_aa
MTKLSSRRPILKPENLLSSPKHLLHLLKHLLRTTEKLFLLPHSEEVAAAHASVHRPEHFK
KPKGAAGIKGRPGPTIGIVDGVSVRQRGDGDSVPEKNRVHLFEGKKKSWLSVKDGHLDSV
LEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLKAYNRVIFVQNCPDTAKKLEKNF
SCNVNTDIKDAVVVPVPQTEDQEANDILHIPMLWEDYRTVFQGSVRSSAAKPCPAVDQVD
THKAIRVLATGARTVARRPVKKLLHIGQARHGDFATICYPQGITKMIAAGEKKTRPRAKV
FYEWAEGSSGRHIYTCTKGGINNQCSSIAMSVVAKECKQFKGLSQIGLSSRNRTLPLCLL
NKSLPGNQPSGSGEQEGAHHGDVLVATEQLRTLDPGAAAHKSTRAESHVAPEKPAPTQPE
QERRVRFSKASPLTETASFSPVLGF

>gi568815594r:163371857_163573734|GENSCAN_predicted_CDS_6|1338_bp
atgaccaagttgagtagcagaagacccatcctgaagccagagaaccttctatcttctccg
aagcatctcctccacttgctcaagcatctcctcagaacaacagaaaaactcttcctactg
cctcactcagaagaggtggcagcagcacacgccagcgtgcaccgccctgagcatttcaaa
aagccgaaaggggctgcggggataaagggaaggccaggacccacgataggaattgtggat
ggggtttctgtgcgtcaaagaggggatggtgacagcgttccagaaaaaaatcgtgtccac
ttatttgaaggcaagaaaaagagctggctgtctgttaaagatggtcatttggacagtgtc
cttgaatggccattttggacaaaactggttgtggtagccattggcttcacaggaggtctt
gtcttcatgtacgtacagtgtaaagtctatgttcagttgtggcgcaggctgaaggcctac
aaccgtgtgatctttgtacaaaattgcccagacactgccaaaaaactggagaagaacttc
tcatgtaatgtaaacacagacatcaaagatgctgtggtagtgcctgtaccacaaacagaa
gatcaggaggcaaatgatatcctccatatccccatgctctgggaagattataggacagtc
ttccaaggctcagtcaggtcatccgcagcaaaaccctgcccagctgtggatcaagtggac
acacacaaggccatcagggtgctggcaacaggagcaagaacagtggcaagaaggccagtt
aagaagctactgcacataggacaggcaagacatggcgactttgccactatttgttatcca
caaggaatcactaaaatgattgctgcaggggagaagaaaactaggccacgagctaaagta
ttctatgaatgggcagaaggttcttctgggagacatatttacacgtgtaccaaagggggg
ataaataatcaatgcagcagtattgcaatgtctgtggtagcaaaagaatgtaaacaattt
aaaggtctatcacagatcgggttaagttcccgaaaccgcaccctccctctctgcctgctc
aacaagagccttccggggaaccaaccgagcggttcgggggagcaggagggggcccaccat
ggtgacgtcctcgtggccacggagcagctccgcactctagacccaggagcagcagctcac
aagagcacccgggccgaatcccacgtggcgcctgagaagcccgcgccgacccaaccggaa
caggagaggcgagtgcgtttctctaaagcgtccccgttaactgagaccgcgtctttttcg
cccgtgttgggcttttaa