GENSCAN 1.0	Date run:  6-Nov-116	Time: 21:25:59

Sequence gi568815586r:110620137_110842707 : 222571 bp : 46.39% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   8631   8782  152  1  2   59   83   128 0.476   9.28
 1.02 Intr +  12336  12423   88  2  1   97  110    -7 0.449   1.94
 1.03 Intr +  14534  14643  110  0  2   18   90    86 0.397   1.80
 1.04 Intr +  16345  16365   21  0  0   95  116     5 0.396   1.74
 1.05 Intr +  20247  20381  135  2  0   74   92   127 0.278  12.46
 1.06 Intr +  20888  21013  126  1  0   71  110    29 0.943   4.28
 1.07 Intr +  24856  24993  138  0  0   35   98   149 0.810  11.26
 1.08 Intr +  27075  27200  126  2  0   78   80    40 0.807   3.08
 1.09 Term +  27613  27756  144  0  0   89   45    59 0.893  -0.39
 1.10 PlyA +  28444  28449    6                              -0.45

 2.15 PlyA -  28666  28661    6                               1.05
 2.14 Term -  29612  29466  147  2  0  104   42    29 0.517  -2.20
 2.13 Intr -  30144  30032  113  1  2   71  116    65 0.859   7.70
 2.12 Intr -  31312  31081  232  1  1  147   88   314 0.999  34.65
 2.11 Intr -  35202  35098  105  0  0  123   54   217 0.961  22.21
 2.10 Intr -  41312  41028  285  2  0   99   96   188 0.772  18.24
 2.09 Intr -  68572  68489   84  1  0  115   62     6 0.011   0.72
 2.08 Intr -  77199  77043  157  2  1  109   61    88 0.285   8.21
 2.07 Intr -  78378  78243  136  1  1   58   87   113 0.963   7.83
 2.06 Intr -  79182  79020  163  0  1   98   84    89 0.125   9.05
 2.05 Intr - 102133 101999  135  1  0   47   80    97 0.577   5.56
 2.04 Intr - 102559 102336  224  2  2   65   72   133 0.966   7.25
 2.03 Intr - 104628 104524  105  1  0  104   92    57 0.995   7.89
 2.02 Intr - 110623 110393  231  2  0   75  101   137 0.987  11.44
 2.01 Init - 122571 122517   55  0  1   82  116   129 0.966  16.55
 2.00 Prom - 127322 127283   40                              -4.06

 3.03 PlyA - 127345 127340    6                               1.05
 3.02 Term - 134632 134556   77  2  2   -7   47   168 0.793   1.20
 3.01 Init - 137857 137797   61  1  1   71   88   111 0.970   8.82
 3.00 Prom - 148540 148501   40                              -7.06

 4.10 PlyA - 149367 149362    6                               1.05
 4.09 Term - 149539 149459   81  1  0   92   38    66 0.279  -0.31
 4.08 Intr - 159141 158953  189  0  0  117   89    35 0.439   6.28
 4.07 Intr - 164267 164195   73  1  1   63   67    71 0.102   1.91
 4.06 Intr - 175026 174940   87  2  0   49   47   114 0.034   2.49
 4.05 Intr - 176929 176886   44  1  2   66   82    25 0.018  -3.26
 4.04 Intr - 191882 191640  243  2  0  117   76    84 0.611   7.79
 4.03 Intr - 196622 196580   43  1  1   79   68    29 0.010  -1.76
 4.02 Intr - 206749 206674   76  2  1   57   67    80 0.019   1.37
 4.01 Init - 221808 221577  232  0  1   77   69   357 0.489  31.12

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:110620137_110842707|GENSCAN_predicted_peptide_1|346_aa
XKPALSFINPEVPDENNFDTLMKTSDGFTLNAESYVSFTTKLDIPTAAKYEYGVPLQTSD
SFLRFPSSLTSSLCTDNNPAAFLVNQAVKCTRKINLEQCEEIEALSMAFYSSPEILRVPD
SRKKVPITVQSIVIQSLNKTLTRREDTDVLQPTLVNAGHFSLCVNVVLEVKYSLTYTDAG
EVTKADLSFVLGTVSSVVVPLQQKFEIHFLQLVAQKVKSLLWGQGFPDYVAPFGNSQAQD
MLDWVPIHFITQSFNRKDSCQLPGALVIEVKWTKYGSLLNPQAKIVNVTANLISSSFPEA
NSGNERTILISTAVTFVDVSAPAEAGFRAPPAINARLPFNFFFPFV

>gi568815586r:110620137_110842707|GENSCAN_predicted_CDS_1|1041_bp
nataaacctgcattatcctttattaatccagaagtacctgatgaaaacaattttgataca
ttgatgaaaacatctgatggttttacattgaatgctgaatcatatgtttccttcacaacc
aaactggatattcctactgctgctaaatatgagtatggggttcctctgcagacttcagat
tcgtttctgagatttccttcgtccctgacatcatctctgtgcactgataataaccctgca
gcgtttctggtgaaccaggctgttaagtgcaccagaaaaataaatttagaacagtgtgaa
gaaattgaagccctcagcatggctttttacagcagcccggaaattctgagggtacctgat
tcaagaaaaaaggtccctatcactgttcagtccatcgtcattcagtctctaaataaaacg
ctcacccgacgggaggacactgatgtgctgcagccgactctcgtcaacgctggacacttt
agcctttgcgtgaatgttgttcttgaggtaaagtacagcctcacatacacagatgcaggt
gaagtcaccaaagctgatctctcattcgttctggggacagttagcagcgtagtggtccca
ctgcagcaaaagtttgaaattcattttcttcagctcgtagcacagaaggtgaagagcctg
ctgtggggccagggcttcccagattacgtggccccttttggaaattcccaggcccaggac
atgctggactgggtgcccatccacttcatcacccagtcattcaacaggaaggattcctgc
cagctcccaggggctttggttatagaagtgaagtggactaaatacggatccctgctgaat
ccacaggccaaaatagtcaatgtaactgcaaatctaatttcatcctcctttcctgaggcc
aactcaggaaatgaaaggacgattcttatttccactgcggttacttttgtggatgtgtct
gcacctgcagaggcaggcttcagagctccaccagccatcaatgccaggctgccctttaac
ttcttcttcccgtttgtttga

>gi568815586r:110620137_110842707|GENSCAN_predicted_peptide_2|723_aa
MADLDKLNIDSIIQRLLEGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETI
CLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAI
VDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVS
FTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMS
VDETLMCSFQAHPLAGRGGCLDEQFHQGPSECAENTKCALGCSQDPAKPSKAQQIPAKVK
SGQVLLQRLRKPLVGLEGGTEVWRALSTSNQQVEQGDAAKPLSVRLCSLNLFLTCPGPSL
VLNPFVNTLEGDHSPGLVVNTSCALMTPKPLCQIPDSDPTAQVKKPRRREAKPLALGHTA
KGGRARTHNQAVTRRAKVAPAERMSKFLRHFTVVGDDYHAWNINYKKWENEEEEEEEEQP
PPTPVSGEEGRAAAPDVAPAPGPAPRAPLDFRGMLRKLFSSHRFQVIIICLVVLDALLVL
AELILDLKIIQPDKNNYAAMVFHYMSITILVFFMMEIIFKLFVFRLEFFHHKFEILDAVV
VVVSFILDIVLLFQEHQFEALGLLILLRLWRVARIINGIIISVKTRSERQLLRLKQMNVQ
LAAKIQHLEFSCSEKIQPRRHILPEAVPTPTSQGSARSPTFVFSLLSLLLSEAYLIVAVS
SAD

>gi568815586r:110620137_110842707|GENSCAN_predicted_CDS_2|2172_bp
atggcggatttagataaactcaacatcgacagcattatccaacggctgctggaaggtgac
atccatggacaatactatgatttgctgcgactttttgagtacggtggtttcccaccagaa
agcaactacctgtttcttggggactatgtggacaggggaaagcagtcattggagacgatc
tgcctcttactggcctacaaaataaaatatcctgagaatttttttcttctcagagggaac
catgaatgtgccagcatcaacagaatttatggattttatgatgaatgtaaaagaagatac
aacattaaactatggaaaactttcacagactgttttaactgtttaccgatagcagccatc
gtggatgagaagatattctgctgtcatggaggtttatcaccagatcttcaatctatggag
cagattcggcgaattatgcgaccaactgatgtaccagatcaaggtcttctttgtgatctt
ttgtggtctgaccccgataaagatgtcttaggctggggtgaaaatgacagaggagtgtcc
ttcacatttggtgcagaagtggttgcaaaatttctccataagcatgatttggatcttata
tgtagagcccatcaggtggttgaagatggatatgaattttttgcaaagaggcagttggtc
actctgttttctgcgcccaattattgcggagagtttgacaatgcaggtgccatgatgagt
gtggatgaaacactaatgtgttcttttcaggcccaccccttggcaggaagagggggatgc
ctggatgagcagttccaccagggacccagcgagtgtgccgagaacacgaaatgtgccctg
ggctgcagccaagacccagcaaagcccagcaaagcccagcaaatcccagcaaaggtcaag
tctggccaagtcttgctgcagcggctgcggaagcctctagttggcctggagggcggaacc
gaggtgtggagagcactttccactagcaaccagcaggtggaacaaggagatgctgctaaa
cccttgagtgtaaggctctgctcactaaacctcttcctcacctgcccaggccctagcttg
gtcctgaacccctttgtcaacactctggaaggggatcacagcccaggccttgttgtcaat
accagttgtgcactgatgacgcccaagcctctctgccaaattcctgactcagatcctact
gcccaggtgaagaaaccaagacgcagagaggccaagccccttgccttgggtcacacagcc
aaaggaggcagagccagaactcacaaccaggcagtcacccgcagggccaaggtggctccc
gctgagaggatgagcaagttcttaaggcacttcacggtcgtgggagacgactaccatgcc
tggaacatcaactacaagaaatgggagaatgaagaggaggaggaggaggaggagcagcca
ccacccacaccagtctcaggcgaggaaggcagagctgcagcccctgacgttgcccctgcc
cctggccccgcacccagggccccccttgacttcaggggcatgttgaggaaactgttcagc
tcccacaggtttcaggtcatcatcatctgcttggtggttctggatgccctcctggtgctt
gctgagctcatcctggacctgaagatcatccagcccgacaagaataactatgctgccatg
gtattccactacatgagcatcaccatcttggtcttttttatgatggagatcatctttaaa
ttatttgtcttccgcctggagttctttcaccacaagtttgagatcctggatgccgtcgtg
gtggtggtctcattcatcctcgacattgtcctcctgttccaggagcaccagtttgaggct
ctgggcctgctgattctgctccggctgtggcgggtggcccggatcatcaatgggattatc
atctcagttaagacacgttcagaacggcaactcttaaggttaaaacagatgaatgtacaa
ttggccgccaagattcaacaccttgagttcagctgctctgagaagatccagcccaggcgt
cacatcctccctgaagctgtgcccacccccacatcccagggctctgccaggtcccccacg
tttgtcttctcactgctgtcactgctgctcagtgaagcctatctgattgtagcagtctcc
tcagcagactga

>gi568815586r:110620137_110842707|GENSCAN_predicted_peptide_3|45_aa
MITVHRILDFWAQAILLLRLQRTCKEEEEEEEEEEKARRKKEEEV

>gi568815586r:110620137_110842707|GENSCAN_predicted_CDS_3|138_bp
atgatcactgttcaccgcatccttgacttctgggctcaagcgatcctcctgcttcggctt
cagagaacttgcaaagaagaagaagaagaggaggaggaggaggagaaggcaaggaggaag
aaggaagaagaagtttga

>gi568815586r:110620137_110842707|GENSCAN_predicted_peptide_4|355_aa
MRFAKKHNKKSLKKMQANNAKAMGARAEAIKALAKPEEAKPKIPKGISHKLDRPACITHS
KLGKLHQPACITPLECSGNAIHVGAPGGATYTDNTVNAIPRVLVSNEFLVDFTWLSQATS
KEPHMEGFANQQRERFIQIFAKGRASSEPLTNSSLHDLKYNLLKTIFWEGRQRKKETKGQ
GGGSQDRIEEDPGNQKAPSLTIIHLLTDMSAGRECGHRPGGSDTAVEQLDACVGERSRTD
VGNHRKPSLRKDDIVERDVVRSNAETSLKIGARQQDSEYKVKSHLEISRPPDVQRIQTEQ
LDHLTASLFSPRTSAAGVSHTAYLHEDTQTVQGPAEKALGGNDLSANELETSTRS

>gi568815586r:110620137_110842707|GENSCAN_predicted_CDS_4|1068_bp
atgcgctttgccaagaagcacaacaaaaagagcctgaagaagatgcaggccaacaatgcc
aaggccatgggtgcacgtgccgaggctatcaaggccctggcaaagcccgaggaggctaag
cccaagatcccaaagggcatcagccacaagcttgatcgacctgcctgcatcacccactcc
aagcttgggaagctccatcaacctgcctgcatcaccccactggagtgcagtggaaacgcc
attcatgttggtgcaccagggggcgccacttacacagacaatacagtgaacgccatcccc
agggtccttgtcagcaacgaattcctagtggattttacctggctatctcaggcaacaagc
aaagagccacacatggagggctttgcaaaccaacagcgtgagaggttcatccagattttt
gccaagggcagagctagctctgagcctctaaccaactcatcattacatgacttaaaatac
aatttgctgaagacaatcttctgggaagggagacagagaaagaaagaaaccaagggtcaa
ggaggaggcagccaagacaggatagaggaggaccctggaaaccagaaggctccttccctg
accattatccacctgctaactgacatgtcagccggaagagaatgtggacacaggcctggg
ggctctgacacagctgtggaacagctggacgcctgcgtgggtgagaggtcgagaacggat
gtgggcaatcacagaaagcccagcttgcgaaaagatgacattgtggaaagggatgtagtg
cggtctaacgctgaaactagtctcaagattggggccaggcagcaagacagtgaatataaa
gtgaaaagtcacctggagatttccaggccaccagatgtgcaacgtattcagacagaacag
ctggatcatttaacagcttccttgttttcccccagaacatccgctgcgggggtgtctcac
acagcatatctacatgaagacacgcagacagtacaagggcctgcagaaaaggctcttgga
ggcaatgatctctctgcaaatgaattggagaccagcacaagatcctag