GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:50:09

Sequence gi568815578r:31365509_31573013 : 207505 bp : 46.31% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3143   3200   58  1  1   74   89    99 0.909   8.09
 1.02 Term +   7992   8011   20  1  2   86   42    31 0.237  -3.22
 1.03 PlyA +   8750   8755    6                               1.05

 2.04 PlyA -   9084   9079    6                               1.05
 2.03 Term -  11931  11738  194  1  2   97   48    98 0.461   4.28
 2.02 Intr -  24986  24915   72  0  0   94   97    53 0.243   6.18
 2.01 Init -  40644  40587   58  0  1   43   97   100 0.877   5.88
 2.00 Prom -  43161  43122   40                              -3.66

 3.00 Prom +  44589  44628   40                              -8.46
 3.01 Init +  48257  48387  131  1  2   70   68    78 0.717   3.62
 3.02 Intr +  54161  54315  155  2  2   45   74   120 0.869   6.02
 3.03 Term +  65720  65745   26  0  2  122   49     4 0.142  -1.71
 3.04 PlyA +  66364  66369    6                               1.05

 4.06 PlyA -  66420  66415    6                               1.05
 4.05 Term -  74667  74609   59  1  2   93   43    73 0.819   1.15
 4.04 Intr -  74966  74862  105  0  0   85   76    18 0.490   0.49
 4.03 Intr -  75487  75379  109  1  1   79   81    45 0.973   2.76
 4.02 Intr -  78315  78082  234  0  0   69   97    77 0.821   4.59
 4.01 Init -  83690  83469  222  2  0   63   98   108 0.759   7.86
 4.00 Prom -  91584  91545   40                              -5.46

 5.00 Prom +  98202  98241   40                              -3.86
 5.01 Init + 110938 111277  340  0  1   73   75   183 0.635  12.94
 5.02 Intr + 112320 112402   83  1  2   83   60   122 0.658   8.26
 5.03 Intr + 116779 116980  202  0  1   95  105   254 0.997  26.66
 5.04 Term + 118651 118922  272  2  2   69   48   355 0.999  25.25
 5.05 PlyA + 119225 119230    6                               1.05

 6.00 Prom + 122651 122690   40                              -3.26
 6.01 Init + 131641 131934  294  0  0   48   86   145 0.392   7.49
 6.02 Intr + 139887 139989  103  2  1   61   32   108 0.394   2.25
 6.03 Intr + 142383 142435   53  1  2  128   45    16 0.407  -0.07
 6.04 Intr + 148951 149226  276  0  0   63   97   426 0.801  38.71
 6.05 Intr + 161976 162074   99  2  0  115  106   137 0.920  18.51
 6.06 Intr + 172671 172753   83  2  2   95   71   106 0.899   8.04
 6.07 Intr + 176920 177075  156  1  0   98   70    43 0.809   2.63
 6.08 Intr + 179439 179527   89  0  2  134   86    65 0.993  10.51
 6.09 Intr + 181931 182184  254  0  2   68  103   111 0.502   7.75
 6.10 Intr + 183457 183606  150  0  0   81  113   108 0.128  12.96
 6.11 Intr + 183699 183824  126  2  0   63   92   207 0.999  19.48
 6.12 Intr + 184556 184613   58  1  1  146  101    98 0.999  15.36
 6.13 Intr + 188031 188048   18  1  0  102  111     1 0.566   0.38
 6.14 Intr + 189238 189321   84  2  0  104   99    91 0.977  11.59
 6.15 Intr + 194103 194139   37  1  1  113  109    92 0.998  11.12
 6.16 Intr + 196126 196228  103  1  1   88   80   200 0.991  19.38
 6.17 Intr + 200702 200787   86  1  2   76  110    73 0.771   6.92
 6.18 Term + 202570 202720  151  1  1  101   38    64 0.516   0.08
 6.19 PlyA + 206671 206676    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100155  99998  158  1  2  103   37    69 0.848   1.40


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:31365509_31573013|GENSCAN_predicted_peptide_1|25_aa
MKLLLLALPMLVLLPQVIPAVFMAA

>gi568815578r:31365509_31573013|GENSCAN_predicted_CDS_1|78_bp
atgaaactcctgctgctggctcttcctatgcttgtgctcctaccccaagtgatcccagct
gtcttcatggcagcataa

>gi568815578r:31365509_31573013|GENSCAN_predicted_peptide_2|107_aa
MKLLLLLLTVTLLLAQVTPGLPAMKLLYLFLAILLAIEEPVISGKRHILRCMGNSGICRA
SCKKNEQPYLYCRNCQSCCLQSYMRISISGKEENTDWSYEKQWPRLP

>gi568815578r:31365509_31573013|GENSCAN_predicted_CDS_2|324_bp
atgaagctccttcttctgcttttgactgttactctgctcctggcccaggtcaccccaggt
ctgccagccatgaaacttctttacctgtttcttgccatccttctggccatagaagaacca
gtgatatcaggcaaacgccacatccttcgatgcatgggtaacagtggaatttgtagggcc
tcttgcaaaaagaacgaacagccctacctctattgcagaaattgtcagtcctgctgcctc
cagtcctacatgaggataagcatttctggcaaagaggaaaataccgactggtcttatgag
aagcagtggccaagactaccttga

>gi568815578r:31365509_31573013|GENSCAN_predicted_peptide_3|103_aa
MGLECRKPELSKQQKTIVGKAVEKMEPLHTLGGNVKWCGHYGKREFAQDLMVFESVWQFP
LVPSLSPAAVEDVPCFLFIFCPDYKFPEASPAMQNYVYGATRF

>gi568815578r:31365509_31573013|GENSCAN_predicted_CDS_3|312_bp
atgggcttagaatgcagaaagccagaattatccaaacaacaaaagacaattgtgggcaag
gctgtggagaaaatggaacccttgcacacgctgggtgggaatgtaaaatggtgtggccac
tatggaaaacgtgagttcgcacaagatctgatggtttttgaaagtgtttggcagttcccc
ctggtgccctctctctcacctgctgccgtggaagatgtgccttgcttcctcttcatcttc
tgccctgattataagtttcctgaggcctccccagccatgcagaactatgtttatggtgcc
actagattctga

>gi568815578r:31365509_31573013|GENSCAN_predicted_peptide_4|242_aa
MTHNQEKNKSTNTEMTMMMKLADKDDKTAMINMLQVVKKVEEAMSMMRRNKDVKNIHGRA
RWVKPMIPALWEAKEVEGKYSAHNFWGSWKFKSSSRSSSSGPESPARTHASFCQPDGGPT
NKLGTKAFRVSPASSLLVDLNTQEVEIINVRKATPTCSLELGRKRRDGAAERAALDVVVV
IYQLAPAAAPNCLNPVTSRRRHKHRLRKVREDGRVLKNKYKATGSSFRFLRDLRTNHSES
FF

>gi568815578r:31365509_31573013|GENSCAN_predicted_CDS_4|729_bp
atgacccataaccaggagaaaaacaaatcaaccaacacagaaatgacaatgatgatgaaa
ctagcagacaaggatgataaaacagctatgataaatatgctccaagtagtaaaaaaggtg
gaggaagccatgagcatgatgagaagaaataaagatgtaaaaaatattcatggccgggca
cgatgggtcaagcctatgatcccagcactttgggaggccaaggaagtagaggggaaatac
tctgcccataatttctggggaagctggaagtttaaatccagctcccgcagcagcagcagt
gggcctgagagccctgctagaacccatgcctcattctgccagcctgatggtggacccacc
aacaagctagggacaaaggcctttcgtgtgtctcctgctagcagtctactggttgacctg
aacactcaggaagtagagataattaatgtgagaaaggccacccccacatgctccctggag
ctgggcaggaagaggagggatggagccgctgagagagcagctctggatgttgtagttgtc
atctatcagctggcacctgctgctgctccaaactgcctgaacccagtgaccagcaggagg
cgccacaaacaccggctccggaaggtcagggaagacggcagagttttgaagaataaatac
aaagcaacagggtcatccttccgcttcctcagagatctgagaaccaaccactcagaatcc
ttcttctga

>gi568815578r:31365509_31573013|GENSCAN_predicted_peptide_5|298_aa
MTLNTEQEAKTPLHRRASTPLPLSPRGHQPGRLSTVPSTQSQHPRLGQSASLNPPTQKPS
PAPDDWSSESSDSEGSWEALYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERT
LTVDGEDTTLVVVDTWEAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLR
RTHQADHVPIILVGNKADLARCREVSVEEGRACAVVFDCKFIETSATLQHNVAELFEGVV
RQLRLRRRDSAAKEPPAPRRPASLAQRARRFLARLTARSARRRALKARSKSCHNLAVL

>gi568815578r:31365509_31573013|GENSCAN_predicted_CDS_5|897_bp
atgacactcaacaccgagcaggaagcaaagacccctctgcaccggcgagccagcacccca
ctgcccctgtccccacggggccaccagcctggccgcctgagcacagtgccttccactcaa
tcccagcatccccggctgggccaatcagcctccctcaaccctcccacccagaaaccttca
cctgccccagatgattggtcttctgaatccagcgactctgaaggctcctgggaggctctc
taccgtgtggtgctacttggagatcctggagtggggaagaccagcttggccagcctcttt
gcagggaagcaagagagggacctccatgaacagctgggagaagatgtatatgagaggacc
ctcacggtggatggagaagacaccacactggtggtcgtggacacctgggaggccgagaaa
ctggataaaagctggagccaggagtcatgcctgcaggggggcagtgcctatgtcatcgta
tactccatcgcagaccgaggcagctttgagagtgcctctgagctccgcatccagctgcgg
cgcacacatcaggcagaccatgtgcccatcatcctcgtgggcaacaaggcagacttggcc
cgctgccgagaagtctctgtggaagagggccgcgcctgcgctgtggtgttcgactgtaaa
ttcatcgagacatccgccacgctgcagcacaatgtggccgagctcttcgagggcgtggtg
cgccaactgcgcttgcgccgccgggacagtgcggccaaggaacccccagcaccccgacgg
ccggccagcctagcccagcgcgctcgtcgcttcctggcacgcctgacagcccgcagcgca
cgccgccgggcactcaaggcccgctccaagtcctgccacaatctggccgtgctctga

>gi568815578r:31365509_31573013|GENSCAN_predicted_peptide_6|739_aa
MNLGINHSWNGDAGKLDSLGMRTADSGRVRWPGRRIDPILRDLRQGWLRSESHQPHQMHP
DLYDISAVPLPGKSPLATHNAHNSTIMDTTKALVQYTKQAWFSVKENEDKADKNRKEMQR
EDPGSMDILASRDYNLNKVSRALASFLDHEGNVAFPAEPVSPPASLLQQPELESDPERTL
AMDSALSDPHNGSAEAGGPTNSTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCAR
GKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSH
TIRGEGHQDVACQWEAMTFTFDMSHQGPGRISACYKSLHSESFSKHFSRCLAGTSPFMNK
FFPASFPNRQYQLLFTQGSGENKEGDSTGALPIPFVSLLSPASPWIMFKKFDEKESVSNC
IQLKTSVIKGIKSQLVEQFPGIEPWLNQIMPKKDPVKIVRCHEHTEILTGLTGGRGSPAS
GSGLTWPLCSEIINYEFDTKDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLH
LNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPIKCDKTKAVVFPQDLLEKGLEA
NNFAMLGLGDVVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHA
QPALLYLVPACIGFPVLVALAKGEVTEMFSYESSAEILPHTPRLTHFPTVSGSPASLADS
MQQKLAGPRRRRPQNPSAM

>gi568815578r:31365509_31573013|GENSCAN_predicted_CDS_6|2220_bp
atgaatctgggcatcaaccactcctggaatggagatgctggcaaactcgactctctgggg
atgcgcacagctgactcagggagggtgcggtggccaggaagaaggatcgatcctattctc
agagatcttcgccagggctggttaagatctgagagccatcagccacatcaaatgcatcct
gatctctatgacatcagtgcggtccctctgcctggtaaatctcctcttgctactcacaat
gcccataattccaccattatggatacaaccaaggctcttgttcagtatacaaagcaagcc
tggttttctgtgaaagagaatgaagacaaagcagataaaaacagaaaggagatgcagaga
gaggatcctggcagcatggacatcctggcttccagggactacaatttgaacaaggtgtcc
agagctttagcatccttcttagatcatgaggggaacgtggctttccctgcagagccggtg
tctccgcctgcgtccctgctgcagcaaccggagctggagtcggatcccgaacgcaccctc
gccatggactcggccctcagcgatccgcataacggcagtgccgaggcaggcggccccacc
aacagcactacgcggccgccttccacgcccgagggcatcgcgctggcctacggcagcctc
ctgctcatggcgctgctgcccatcttcttcggcgccctgcgctccgtacgctgcgcccgc
ggcaagaatgcttcagacatgcctgaaacaatcaccagccgggatgccgcccgcttcccc
atcatcgccagctgcacactcttggggctctacctctttttcaaaatattctcccaggag
tacatcaacctcctgctgtccatgtatttcttcgtgctgggaatcctggccctgtcccac
accatcaggggagaagggcaccaggatgtggcttgtcagtgggaagcaatgacctttacg
tttgacatgagccatcaagggccaggaagaatctctgcctgctacaaaagtctgcattca
gagtcattcagcaagcattttagcagatgtctagcaggcaccagccccttcatgaataag
ttttttccagccagctttccaaatcgacagtaccagctgctcttcacacagggttctggg
gaaaacaaggaaggggactccaccggagccttgccaattccgtttgtttccctgttgtcg
cccgcttcaccctggatcatgttcaagaagtttgatgaaaaggaaagtgtgtccaactgc
atccagttgaaaacgtcagttattaagggcattaagagccaactggtagagcaatttcca
ggtattgaaccatggcttaatcaaatcatgcctaagaaagatcctgtcaaaatagtccga
tgccacgaacatacagaaatccttaccgggctgacaggtgggaggggtagccctgcctca
gggagtggacttacctggcctctctgctcagagatcatcaattatgaatttgacaccaag
gacctggtgtgcctgggcctgagcagcatcgttggcgtctggtacctgctgaggaagcac
tggattgccaacaacctttttggcctggccttctcccttaatggagtagagctcctgcac
ctcaacaatgtcagcactggctgcatcctgctgggcggactcttcatctacgatgtcttc
tgggtatttggcaccaatgtgatggtgacagtggccaagtccttcgaggcaccaataaaa
tgtgacaaaactaaggcagtggtgtttccccaggatctgctggagaaaggcctcgaagca
aacaactttgccatgctgggacttggagatgtcgtcattccagggatcttcattgccttg
ctgctgcgctttgacatcagcttgaagaagaatacccacacctacttctacaccagcttt
gcagcctacatcttcggcctgggccttaccatcttcatcatgcacatcttcaagcatgct
cagcctgccctcctatacctggtccccgcctgcatcggttttcctgtcctggtggcgctg
gccaagggagaagtgacagagatgttcagctacgagtcctcggcggaaatcctgcctcat
accccgaggctcacccacttccccacagtctcgggctccccagccagcctggccgactcc
atgcagcagaagctagctggccctcgccgccggcgcccgcagaatcccagcgccatgtaa