GENSCAN 1.0	Date run:  3-Nov-116	Time: 17:53:32

Sequence gi568815595f:138272884_138502266 : 229383 bp : 45.77% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +     84    233  150  2  0   85   95     1 0.516   0.86
 1.02 Intr +   1566   1661   96  2  0   91   98    44 0.909   5.91
 1.03 Intr +  11548  11643   96  0  0  126   89    72 0.993  11.31
 1.04 Intr +  16165  16237   73  0  1   91  116   -14 0.849   0.68
 1.05 Intr +  17663  17756   94  0  1   66   89    98 0.674   6.72
 1.06 Term +  25803  25938  136  0  1  126   48    84 0.577   5.69
 1.07 PlyA +  27632  27637    6                               1.05

 2.12 PlyA -  28139  28134    6                               1.05
 2.11 Term -  30246  30137  110  1  2   13   48    63 0.259  -6.53
 2.10 Intr -  30760  30624  137  0  2   53  110   148 0.998  13.71
 2.09 Intr -  32144  31990  155  2  2   90   59   218 0.996  17.97
 2.08 Intr -  33597  33515   83  1  2   15  116    84 0.785   3.26
 2.07 Intr -  41524  41449   76  1  1   20   92   129 0.872   5.59
 2.06 Intr -  42760  42644  117  1  0   64   38   113 0.836   4.56
 2.05 Intr -  56523  56420  104  1  2   30  115   100 0.111   6.79
 2.04 Intr -  73553  73488   66  0  0  106   66    53 0.046   3.78
 2.03 Intr -  78533  78491   43  2  1  100   92    23 0.140   1.71
 2.02 Intr -  86265  86220   46  2  1  119   86    21 0.034   3.41
 2.01 Init -  96695  96571  125  2  2   80   72    79 0.148   3.31
 2.00 Prom -  97979  97940   40                             -11.14

 3.00 Prom +  98502  98541   40                              -6.66
 3.01 Init + 100001 100193  193  1  1   86   93   274 0.997  26.83
 3.02 Intr + 104884 105033  150  2  0   74   13   113 0.735   2.53
 3.03 Term + 105426 105547  122  1  2  111   44    56 0.819   2.14
 3.04 PlyA + 105974 105979    6                              -1.95

 4.00 Prom + 106804 106843   40                              -6.36
 4.01 Init + 111440 111506   67  1  1  101   69    57 0.535   6.34
 4.02 Intr + 124441 124594  154  2  1   69   99   340 0.744  32.33
 4.03 Intr + 125586 125689  104  0  2   78   75    87 0.964   6.22
 4.04 Intr + 126160 126305  146  2  2   35   51   115 0.928   2.50
 4.05 Intr + 127600 127730  131  0  2   14   71   150 0.774   5.39
 4.06 Intr + 130768 130855   88  1  1  121   77    14 0.544   3.57
 4.07 Intr + 137929 138024   96  0  0   62   47    90 0.130   2.51
 4.08 Term + 151280 151336   57  1  0  103   55    26 0.074  -1.51
 4.09 PlyA + 154022 154027    6                               1.05

 5.00 Prom + 159688 159727   40                              -1.66
 5.01 Init + 161916 162242  327  2  0   64   80   505 0.994  42.62
 5.02 Intr + 166413 166610  198  2  0   32   43   125 0.725   1.95
 5.03 Intr + 167255 167341   87  1  0   73  105     6 0.447   0.97
 5.04 Intr + 179165 179206   42  1  0   85  116    71 0.976   8.04
 5.05 Intr + 182311 182445  135  0  0   94   98   160 0.858  18.36
 5.06 Intr + 184685 184761   77  1  2   75   93   118 0.991   9.31
 5.07 Intr + 185847 186005  159  0  0   74  105    54 0.910   4.80
 5.08 Intr + 186304 186370   67  1  1   96   94   169 0.999  17.21
 5.09 Intr + 187068 187151   84  2  0   89  117   128 0.533  15.82
 5.10 Intr + 187701 187783   83  2  2   72   58    86 0.942   2.44
 5.11 Intr + 189203 189323  121  2  1   63   56   188 0.794  13.60
 5.12 Intr + 191462 191632  171  1  0   40   94   210 0.995  16.94
 5.13 Intr + 192456 192538   83  2  2   94   94   162 0.999  15.84
 5.14 Intr + 194678 194726   49  2  1   94   77    53 0.928   3.48
 5.15 Intr + 195222 195311   90  2  0   98  105    70 0.779   9.89
 5.16 Intr + 195772 195834   63  0  0   97  117    58 0.976   8.51
 5.17 Intr + 195936 195998   63  2  0  108   70    81 0.989   7.21
 5.18 Intr + 196553 196621   69  1  0   66  116    13 0.704   1.28
 5.19 Intr + 197177 197263   87  1  0  122   42    68 0.973   5.77
 5.20 Intr + 197994 198143  150  2  0   34   66   176 0.926  10.36
 5.21 Intr + 199480 199976  497  0  2  106    1   395 0.315  24.39
 5.22 Intr + 200653 200751   99  1  0   38  103    83 0.374   4.03
 5.23 Intr + 201338 201469  132  2  0   22  105   112 0.424   6.06
 5.24 Intr + 206759 206889  131  2  2   -6   58    87 0.011  -3.36
 5.25 Intr + 211723 211886  164  2  2   60   95    28 0.080   0.39
 5.26 Term + 212006 212266  261  1  0   84   36   127 0.081   2.63
 5.27 PlyA + 212767 212772    6                               1.05

 6.04 PlyA - 213396 213391    6                               1.05
 6.03 Term - 217604 217515   90  2  0   55   43    71 0.592  -2.98
 6.02 Intr - 219811 219691  121  0  1   74   96    31 0.640   3.00
 6.01 Intr - 227341 227227  115  2  1  121   53    39 0.223   3.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:138272884_138502266|GENSCAN_predicted_peptide_1|214_aa
NMAFQAEQKIKADILRSLSTEQLFRLLSDSDLNVLMKTLGLLRNLLSTRPHIDKIMSTHG
KQIMQAVTLILEGEHNIEVKEQTLCILANIADGTTAKDLIMTNDDILQKIKYYMGHSHVK
LQLAAMFCISNLIWNEEEGSQERQDKLRDMGIVDILHKLSQSPDSNLCDKYAPSPLPPAC
ISTTTVCKSLLSLCKDTQVLFVYYALPPFPISEL

>gi568815595f:138272884_138502266|GENSCAN_predicted_CDS_1|645_bp
aatatggcatttcaggctgaacaaaaaataaaagcagatattttacgaagcttgagtact
gaacagctattccggttattatcagattcagatttgaatgtgctgatgaagacattggga
cttcttagaaatctcctctccactcgtcctcatatagataaaataatgagtactcatgga
aagcaaattatgcaagccgtcactcttattctagaaggggaacataacattgaggtcaaa
gagcagacactgtgcatcttagccaacatagcggatgggacaacagcaaaagatcttatt
atgaccaatgatgatatcctacagaaaatcaagtattacatgggccattcacatgttaaa
ctgcagcttgcagccatgttttgtatatcaaacctcatatggaatgaagaggaaggttca
caagaacgccaggataaattacgagacatgggcatcgtagatattctacacaaactgagt
cagtcaccagattcaaacctttgtgacaagtatgccccatctccactaccaccagcttgc
atctccactaccacagtatgcaagagcttgctatccctctgcaaggacacacaggtgctc
ttcgtctactacgcactgccaccttttcccatctctgaattgtag

>gi568815595f:138272884_138502266|GENSCAN_predicted_peptide_2|353_aa
MLRRKVQAPSQDIQCLSLAATADLSSHTRAAAPYTLLSPPTSNQLAAPFLRGKACPKIKV
TVPSMPAQGLAELGKAGRDLYILVACQPLVGSPSVCREAAGERPTAAVTGLRLLCRAMGS
RKKEIALQGGELVAVVRGANAPLLQKTILDQLEAEKKVLAEGRERKVIKDEALSDEDECV
SHGKNNGEDEDMVSSERTCTLAIIKPDAVAHGKTDEIIMKEAFEKLVHHMCSGPSHLLIL
TRTEGFEDVVTTWRTVMGPRDPNVARREQPESLRAQYGTEMPFNAVHGSRDREDADRELA
LLFPSLKFSDKDTEAPQAPKGSLRNAAIRKGPQPGACCDFISLNTTFQCMTVV

>gi568815595f:138272884_138502266|GENSCAN_predicted_CDS_2|1062_bp
atgctgaggaggaaagtccaggccccctcacaggacattcaatgcctgtcgctggctgcc
actgctgacctctccagccacacccgtgccgcagccccttatactctactgtcaccccca
accagtaaccagcttgctgctccattcctgcgaggcaaggcctgtccaaagataaaggtg
actgtaccttctatgcctgcccagggcctggcagaacttgggaaggcgggcagggatctg
tacatcctggtggcctgtcagcccctcgtgggctccccatcggtttgtcgcgaggctgcg
ggggaacggcccacggccgcggtaacagggcttcgtcttctttgcagagccatgggcagc
aggaagaaggaaattgccctgcagggaggagaactggtggctgtggttagaggagcaaat
gccccactgctgcagaaaaccatcctagaccagctggaggccgaaaagaaagtgctggct
gaaggcagagaacggaaagtgattaaagatgaggctctttctgatgaagatgaatgtgtt
tcccatggaaagaataatggtgaagatgaggacatggtttcatcagagaggacctgtacc
ttggccatcattaaaccagatgcagtggcccatggaaagactgatgagattatcatgaag
gaggcatttgagaagctggtacatcacatgtgcagtggaccaagccacctcctgatcctc
accaggactgagggcttcgaggacgtggtcactacctggcgaaccgtcatgggcccccgt
gaccccaatgtggccaggagggagcagccagaaagtctccgagctcagtacggcacagaa
atgcccttcaatgccgtccatggaagccgggacagagaagatgctgacagagaactggca
ttgctcttccccagtttgaaattttcagacaaagatacagaagcccctcaggcccctaag
ggctcactgagaaacgcagctatacggaagggccctcaacctggagcctgctgtgacttc
atctccctcaacaccacatttcaatgcatgaccgttgtttag

>gi568815595f:138272884_138502266|GENSCAN_predicted_peptide_3|154_aa
MATSAVPSDNLPTYKLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQW
AILDERIKTWQHDDEEKEENDNFDDGVLNGQKLCGRPVLSTLHLLSLNPYKCYRGSHIAC
VLPEPKRQELAGLRGQQPGSPVAVGPPGFGASLL

>gi568815595f:138272884_138502266|GENSCAN_predicted_CDS_3|465_bp
atggcaaccagcgccgtccccagtgacaacctccccacatacaagctggtggtggtgggg
gatgggggtgtgggcaaaagtgccctcaccatccagtttttccagaagatctttgtgcct
gactatgaccccaccattgaagactcctacctgaaacatacggagattgacaatcaatgg
gccatcttggacgaaagaataaaaacgtggcagcacgatgatgaggagaaggaagagaat
gataattttgatgacggggtattgaatgggcagaaactgtgtggaaggcccgtgctaagc
acattgcatttgctgtctttgaatccttacaaatgctatcgtggaagtcacattgcctgt
gtcctcccagaacctaagagacaagagctggctggcctcaggggccagcagccaggctct
cctgtggctgtgggacccccaggctttggagcaagcctgctctga

>gi568815595f:138272884_138502266|GENSCAN_predicted_peptide_4|280_aa
MAESERPVKKLLMMGLGIGGGGVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEH
VDRFHQLILRVKDRESFPMILVANKVDLMHLRKITREQGKEMATKHNVGASAMAGFGVQP
GRGSKADLSTPYQGQEKVESVPSSNPDSLPAGVDLEQGFEDLCATLIKLSFAFQIPYIET
SAKDPPLNVDKAFHDLVRVIRCCWCEPKTGVFPAGVGVERQQEQRCTKEKFPSVTKRVTH
MTPSSPPLLWLTPPASRALNTLVNTPKAKNKSQLVKSSHS

>gi568815595f:138272884_138502266|GENSCAN_predicted_CDS_4|843_bp
atggcagaatcggaaagaccagttaagaagctcctgatgatgggcttgggcattggtgga
ggaggtgttctggacacagctgggcaggaggaattcagcgccatgcgggagcaatacatg
cgcacgggggatggcttcctcatcgtctactccgtcactgacaaggccagctttgagcac
gtggaccgcttccaccagcttatcctgcgcgtcaaagacagggagtcattcccgatgatc
ctcgtggccaacaaggtcgatttgatgcacttgaggaagatcaccagggagcaaggaaaa
gaaatggcgaccaaacacaatgtaggggcatctgccatggccggatttggtgtccaacct
ggaagaggctccaaagcagacctcagcaccccttaccagggccaggagaaagtggaaagt
gtgcccagttcaaaccctgattctctgccagccggtgttgaccttgagcaaggctttgag
gatctctgtgccactttgatcaagttgagctttgccttccagattccgtacatagaaacc
agtgccaaggacccacctctcaatgtcgacaaagccttccatgacctcgttagagtaatt
aggtgctgctggtgtgagccaaagactggagtttttccagctggggtgggagtggagaga
caacaggaacaacgctgcaccaaagaaaagttccccagcgtgactaagcgtgtaacgcac
atgactccctcatctccacccctgctgtggttaacaccccctgcctctcgggccctcaac
accctggtcaacaccccaaaggccaagaacaagagccagcttgtcaagtcctcccattct
tga

>gi568815595f:138272884_138502266|GENSCAN_predicted_peptide_5|1162_aa
MRAEEPCAPGAPSALGAQRTPGPELRLSSQLLPELCTFVVRVLFYLGPVYLAGYLGLSIT
WLLLGALLWMWWRRNRRGKLGRLAAAFEFLDNEREFISRELRGQHLPAWHLDDCQGVERV
EGTRRALLWNPLHPGFSWSLLLWVLGVPAVLPALELPSDLQSPSFVLWAPKTLLGDPTRC
LSCLSPSNWVRTGAAGRSKHQGKKIHFPDVERVEWANKIISQTWPYLSMIMESKFREKLE
PKIREKSIHLRTFTFTKLYFGQKCPRVNGVKAHTNTCNRRRVTVDLQICPSSTWDVSSGG
CFCVPMKDTWAEMGQGDSRGGKVGSVFTKSPSFSSSGYRGVSYIGDCEISVELQKIQAGV
NGIQGTLRVILEPLLVDKPFVGAVTVFFLQKPPNSFPLPLKHLQINWTGLTNLLDAPGIN
DVSDSLLEDLIATHLVLPNRVTVPVKKGLDLTNLRFPLPCGVIRVHLLEAEQLAQKDNFL
GLRGKSDPYAKVSIGLQHFRSRTIYRNLNPTWNEVFEFMVYEVPGQDLEVDLYDEDTDRD
DFLGSLQICLGDVMTNRVVDEWFVLNDTTSGRLHLRLEWLSLLTDQEVLTEDHGGLSTAI
LVVFLESACNLPRNPFDYLNGEYRAKKLSRFARNKVSKDPSSYVKLSVGKKTHTSKTCPH
NKDPVWSQVFSFFVHNVATERLHLKVLDDDQECALGMLEVPLCQILPYADLTLEQRFQLD
HSGLDSLISMRLVLRFLQVEERELGSPYTGPEALKKGPLLIKKVATNQGPKAQPQEEGPT
DLPCPPDPASDTKDVSRSTTTTTSATTVATEPTSQETGPEPKGKDSAKRFCEPIGEKKSP
ATIFLTVPGPHSPGPIKSPRPMKCPASPFAWPPKRLAPSMSSLNSLASSCFDLADISLNI
EGGDLRRRQLGEIQLTVRYVCLRRCLSVLINGCRNLTPCTSSGADPYVRVYLLPERKWAC
RKKTSVKRKTLEPLFDETTPTVYPWLMAFMFYQQATPFGKFLSHKWVAWSYGCQRKSKSQ
PGLAKAGAGSLSLQRGVEGEARAGTGPVLAGQLEFWVGVGLAGPTLGAAGRPCQPQGRAR
DLQPTMPEPPTPSMGSCVARASPTSTAPCSTAPSPIDHPRAEECRHTAWDWQAAPPAALV
WDPLGEASCAPESGGALEKLYV

>gi568815595f:138272884_138502266|GENSCAN_predicted_CDS_5|3489_bp
atgcgagcagaggagccctgcgcccccggggcccccagcgccctgggagcccagcgcacg
ccgggccccgagctgcgcctgtccagccagctgctgcccgagctctgtaccttcgtggtg
cgcgtgctgttctacctggggcctgtctacctagctggctacctggggctcagcataacc
tggttgctgctcggcgccctgctgtggatgtggtggcgcaggaaccgccgcgggaagctt
gggcgcctggccgccgccttcgaattccttgacaatgaacgcgagttcatcagccgcgag
ctgcggggccagcacctgccagcctggcatctggatgactgtcaaggggtggagcgagtg
gaagggacgcgcagagcacttctgtggaaccccctgcaccctggcttttcctggagcctg
ctcctgtgggttctcggagtcccggctgtgctgcccgcgctagagctgccttctgatctt
cagagcccatccttcgtgctctgggctcctaagacccttcttggggaccccactcgctgc
ctttcatgcctgtccccatctaactgggtgcgcactggggctgccggcagaagcaagcac
caggggaaaaagatccacttcccggacgtggagcgggtcgagtgggccaacaagatcatc
tctcagacctggccctacctaagcatgatcatggaaagcaagttccgggagaaacttgag
cccaagatccgagagaagagcatccacctgaggacctttacctttaccaagctctacttt
ggacagaagtgtcccagggtcaacggtgtcaaggcacacactaatacgtgcaaccgaaga
cgtgtgactgtggacctgcagatctgccccagcagcacctgggatgtaagcagtgggggc
tgcttctgtgtccccatgaaagacacctgggcagagatgggacagggggacagcaggggt
ggaaaagtgggcagcgtgtttaccaagagcccctccttttcatcttcagggtatcgtggg
gtgagctacatcggggactgtgagatcagtgtggagctgcagaagattcaggctggtgtg
aacgggatccagggcaccctgcgggtcatcctggagcccctcctagtggacaagcccttt
gtgggagccgtgactgtgttcttccttcagaagccgcctaatagcttccctctgcccctg
aagcacctacagatcaactggactggcctgaccaacctgctggatgcgccgggaatcaat
gatgtgtcagacagcttactggaggacctcattgccacccacctggtgctgcccaaccgt
gtgactgtgcctgtgaagaaggggctggatctgaccaacctgcgcttccctctgccctgt
ggggtgatcagagtgcacttgctggaggcagagcagctggcccagaaggacaactttctg
gggctccgaggcaagtcagatccctacgccaaggtgagcatcggcctacagcatttccgg
agtaggaccatctacaggaacctgaaccccacctggaacgaagtgtttgagttcatggtg
tacgaagtccctggacaggacctggaggtagacctgtatgatgaggataccgacagggat
gacttcctgggcagcctgcagatctgccttggagatgtcatgaccaacagagtggtggat
gagtggtttgtcctgaatgacacaaccagcgggcggctgcacctgcggctggagtggctt
tcattgcttactgaccaagaagttctgactgaggaccatggtggcctttccactgccatt
ctcgtggtcttcttggagagtgcctgcaacttgccgagaaacccttttgactacctgaat
ggtgaatatcgagccaaaaaactctccaggtttgccagaaacaaggtcagcaaagaccct
tcttcctatgtcaaactatctgtaggcaagaagacacatacaagtaagacctgtccccac
aacaaggaccctgtgtggagccaggtgttctccttctttgtgcacaatgtggccactgag
cggctccatctgaaggtgcttgatgatgaccaggagtgtgctctgggaatgctggaggtc
cccctgtgccagatcctcccctatgctgacctcactcttgagcagcgctttcagctggac
cactcaggcctggacagcctcatctccatgaggctggtgcttcggttcctgcaagtggag
gaacgagagctggggagcccatacacaggacctgaagccctaaagaaaggccctctgctc
atcaagaaagtggctaccaaccagggtcccaaagcccaacctcaggaagaaggccctaca
gatttgccatgtcccccagaccctgcttctgatactaaggacgtatccaggagtaccaca
accaccaccagtgctaccaccgttgccactgagcccacatcccaagagacaggcccagag
cctaaaggcaaggacagtgccaaaaggttctgtgagcccatcggggagaagaagagtcca
gccaccatcttcctgactgtcccaggtccccactctccagggcccatcaagtcacccaga
cccatgaaatgccctgcctccccattcgcatggccgcccaagaggctggctcccagcatg
tcctcgctcaactccttggcctcttcttgctttgacctggcagatatcagcctcaacatt
gaaggtggggacctcaggcgacggcagctgggtgagattcagctcacagtgcgctatgtg
tgtctgcggcgctgcctcagcgtgctaatcaatggctgcagaaacctaacaccatgtacc
agcagtggagctgatccctacgtccgtgtctacttgttgccagaaaggaagtgggcatgt
cgtaagaagacttcagtgaagcggaagaccttggaacccctgtttgatgagactaccccc
acagtttacccttggctcatggccttcatgttttatcagcaggcaacaccttttggcaag
tttcttagccacaagtgggttgcatggtcctatggctgccagcggaaatctaaatctcag
cctgggctggccaaggccggagccggctccctcagcttgcagagaggtgtggagggagag
gcgcgagcaggaactgggccggtgcttgcgggccagctggagttctgggtgggtgtgggc
ttggcgggccccacactcggagcagccggccggccctgccagccccagggcagggctcgg
gacctgcagcccaccatgcctgagcctcccaccccctccatgggctcctgtgtggcccga
gcctccccgacgagcaccgccccctgctccacagcacccagtcccatcgaccacccaagg
gctgaggagtgcaggcacacggcgtgggactggcaggcagctccacctgcagccctggtg
tgggacccactgggtgaagccagctgtgctcctgagtctggtggggccttagagaagctt
tatgtctag

>gi568815595f:138272884_138502266|GENSCAN_predicted_peptide_6|108_aa
XSSSSLCVLVSTVGKLCRLINEDVNEQVMQVLGPEDLQRYQLSHNRAFGVPEAFGVPESK
PSLLDSISGPCPGCPLPFRVLAEDSFDESDFSEIDDSYDSNDSDVSFV

>gi568815595f:138272884_138502266|GENSCAN_predicted_CDS_6|327_bp
natagttcatcctcattgtgtgtgctagtaagcactgttggaaaactctgtaggctgatt
aatgaagatgtgaatgagcaggttatgcaggtattaggacctgaagacctccagaggtac
cagctcagccacaatagagcttttggggtccctgaggcttttggggtccctgaatccaag
cctagtctcttggacagcatttctggaccctgccctgggtgcccactgcccttcagggtg
ttggctgaagattcatttgacgaatctgatttttctgaaatagatgattcttatgattcc
aatgattctgacgttagttttgtttag