GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:21:34

Sequence gi568815597f:149751114_149886974 : 135861 bp : 44.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   6287   6326   40                              -2.56
 1.01 Init +  14589  14690  102  2  0   74   43    72 0.406   1.54
 1.02 Term +  24977  25144  168  1  0   87   38   127 0.813   5.48
 1.03 PlyA +  26082  26087    6                              -0.45

 2.00 Prom +  26391  26430   40                              -3.66
 2.01 Init +  31631  31661   31  1  1   80   98    21 0.464   1.01
 2.02 Intr +  37253  37504  252  0  0   60   67   183 0.708  10.81
 2.03 Intr +  38941  39225  285  2  0   69   97   129 0.930   9.21
 2.04 Term +  40175  40404  230  0  2   86   43   153 0.593   7.39
 2.05 PlyA +  40537  40542    6                               1.05

 3.04 PlyA -  40689  40684    6                               1.05
 3.03 Term -  42350  42219  132  2  0   82   49    59 0.002  -0.51
 3.02 Intr -  54009  53964   46  2  1  112   43    43 0.095   0.61
 3.01 Init -  61210  60834  377  1  2   90   63   951 0.380  89.21
 3.00 Prom -  61339  61300   40                             -10.84

 4.02 PlyA -  61606  61601    6                               1.05
 4.01 Sngl -  62568  62158  411  0  0   97   48   999 0.998  93.09
 4.00 Prom -  67740  67701   40                              -4.76

 5.00 Prom +  69263  69302   40                              -5.56
 5.01 Init +  72426  72497   72  2  0   24  105    53 0.439   1.67
 5.02 Term +  81521  81883  363  1  0   45   47   680 0.940  54.17
 5.03 PlyA +  82598  82603    6                               1.05

 6.03 PlyA -  83100  83095    6                               1.05
 6.02 Term -  90186  89634  553  2  1   -5   48  1085 0.930  88.99
 6.01 Init -  91585  91197  389  1  2   62   61   701 0.090  61.08
 6.00 Prom -  91673  91634   40                              -5.66

 7.00 Prom +  91837  91876   40                             -16.58
 7.01 Init +  91926  92301  376  2  1   78   89   675 0.962  63.70
 7.02 Term +  95168  95244   77  0  2   47   29    64 0.121  -5.60
 7.03 PlyA +  95346  95351    6                               1.05

 8.03 PlyA -  95420  95415    6                               1.05
 8.02 Term -  99147  99113   35  1  2   66   32    44 0.520  -5.65
 8.01 Init -  99660  99285  376  0  1   78   89   675 0.970  63.70
 8.00 Prom -  99749  99710   40                             -16.58

 9.00 Prom +  99913  99952   40                              -5.66
 9.01 Init + 100001 100389  389  1  2   62   61   701 0.090  61.08
 9.02 Term + 101400 101952  553  0  1   -5   48  1085 0.930  88.99
 9.03 PlyA + 103138 103143    6                               1.05

10.06 PlyA - 104855 104850    6                               1.05
10.05 Term - 110069 109707  363  2  0   45   47   680 0.924  54.17
10.04 Intr - 114325 114253   73  0  1   66   66    31 0.243  -1.89
10.03 Intr - 119554 119433  122  1  2  120   68    50 0.309   5.49
10.02 Intr - 127817 127652  166  1  1   20   21   119 0.089  -1.64
10.01 Init - 135527 135151  377  2  2   69   89   997 0.482  94.31

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  90328  90273   56  1  2   62  119    73 0.841   8.56
S.002 Sngl -  91585  91193  393  1  0   62   54   715 0.909  61.74
S.003 Sngl + 100001 100393  393  1  0   62   54   715 0.909  61.74
S.004 Init + 101258 101313   56  1  2   62  119    73 0.841   8.56


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_1|89_aa
MTEGDANTSLFTWQQQGEMQSKSGEKSLIKPSDLDSNCNAKDFCLSQTKELVWRLPVAME
TRTKRKKAVGFIEQSDSTKLFSVEGVSSG

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_1|270_bp
atgacagaaggagatgcaaatacatccctcttcacatggcagcagcaaggagaaatgcag
agcaaaagcggggaaaagtcccttataaaaccatcagatctcgactccaattgtaacgct
aaagatttttgccttagccagaccaaagaattggtgtggcggctgcccgtggcgatggaa
acacggaccaagagaaaaaaggctgtaggctttattgagcagagtgacagtacaaagctt
ttcagcgtggaaggggtttcgagcgggtag

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_2|265_aa
MWFLTTLLLWGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSN
LTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSC
ETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKR
SPELELQVLVGIMFLVNTVLWVTIRKELKRKKKWDLEISLDSGHEKKVISSLQEDRHLEE
ELKCQEQKEEQLQEGVHRKEPQGAT

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_2|798_bp
atgtggttcttgacaactctgctcctttggggctggctactactgcaggtctccagcaga
gtcttcacggaaggagaacctctggccttgaggtgtcatgcgtggaaggataagctggtg
tacaatgtgctttactatcgaaatggcaaagcctttaagtttttccactggaattctaac
ctcaccattctgaaaaccaacataagtcacaatggcacctaccattgctcaggcatggga
aagcatcgctacacatcagcaggaatatctgtcactgtgaaagagctatttccagctcca
gtgctgaatgcatctgtgacatccccactcctggaggggaatctggtcaccctgagctgt
gaaacaaagttgctcttgcagaggcctggtttgcagctttacttctccttctacatgggc
agcaagaccctgcgaggcaggaacacatcctctgaataccaaatactaactgctagaaga
gaagactctgggttatactggtgcgaggctgccacagaggatggaaatgtccttaagcgc
agccctgagttggagcttcaagtgcttgtgggaataatgtttttagtgaacactgttctc
tgggtgacaatacgtaaagaactgaaaagaaagaaaaagtgggatttagaaatctctttg
gattctggtcatgagaagaaggtaatttccagccttcaagaagacagacatttagaagaa
gagctgaaatgtcaggaacaaaaagaagaacagctgcaggaaggggtgcaccggaaggag
ccccagggggccacgtag

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_3|184_aa
MPDPAKSAPAPKKGSKKAVTKVQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
KYTSSKKNRKENYLQMDTEEVDGPWALVGEARRFPSPCGVAPAEPGAFLPAGLLIPPSQL
PSCF

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_3|555_bp
atgccggatccagcgaaatccgctcctgctcccaagaagggctccaaaaaggctgttacg
aaagtgcagaagaaggacggcaagaagcgcaagcgcagccgcaaggagagctactccgtt
tacgtgtacaaggtgctgaagcaggtccaccccgacaccggcatctcgtccaaggccatg
ggcatcatgaactccttcgtcaacgacatcttcgagcgcatcgcgggagaggcgtcccgc
ctggcgcactacaacaagcgctccaccatcacatcccgcgagatccagacggccgtgcgc
ctgctgctgcccggcgagctggccaagcacgccgtgtccgagggcaccaaggcggtcacc
aagtacaccagctcgaaaaaaaacagaaaagagaactatctccagatggatacagaagag
gtggatgggccgtgggcccttgtgggtgaagctcggcggttcccgagtccatgtggggtg
gcccctgcggagcctggagccttcttgcccgctggcttgctgatcccgccgagccagctc
ccttcctgcttttga

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_4|136_aa
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI
MPKDIQLARRIRGERA

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_4|411_bp
atggcccgtactaagcagactgcccgcaagtcgaccggcggcaaggccccgaggaagcag
ctggctaccaaagcggcccgcaagagcgcgccggccacgggcggggtgaagaagccgcac
cgctaccggcccggcaccgtggctctgcgggagatccggcgctaccagaagtctacggag
ctgctgatccgcaagctgcccttccagcggctggtacgcgagatcgcgcaggactttaag
acggacctgcgcttccagagctcggccgtgatggcgctgcaggaggccagcgaggcctac
ctggtggggctgttcgaagacacgaacctgtgcgccatccatgccaagcgcgtgaccatc
atgcccaaggacatccagttggcccgccgcatccgcggggagcgggcctaa

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_5|144_aa
MFPKVRVYPASQNVNAFGNWGFEDGKTVLALTEAVYRAPAVMSGRGKGGKGLGKGGAKRH
RKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKR
KTVTAMDVVYALKRQGRTLYGFGG

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_5|435_bp
atgttccctaaagttcgtgtctatccagcatctcaaaatgtgaacgcatttggaaactgg
ggctttgaagacgggaagacggtgctcgccttgacagaagctgtctatcgggctccagcg
gtcatgtccggcagaggaaagggcggaaaaggcttaggcaaagggggcgctaagcgccac
cgcaaggtcttgagagacaacattcagggcatcaccaagcctgccattcggcgtctagct
cggcgtggcggcgttaagcggatctctggcctcatttacgaggagacccgcggtgtgctg
aaggtgttcctggagaatgtgattcgggacgcagtcacctacaccgagcacgccaagcgc
aagaccgtcacagccatggatgtggtgtacgcgctcaagcgccaggggcgcaccctgtac
ggcttcggaggctag

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_6|313_aa
MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
TESHHKAKGNQWTASAGFSIIVPPNREKTVLIKTAAAGLGARFSPRRCAGKPVFWFAMAR
TKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI
RKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPK
DIQLARRIRGERA

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_6|942_bp
atgtctggtcgtggcaagcaaggaggcaaggcccgcgccaaggccaagtcgcgctcgtcc
cgcgctggccttcagttcccggtagggcgagtgcatcgcttgctgcgcaaaggcaactac
gcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcctcgagtatctgacc
gccgagatcctggagctggcgggcaacgcggctcgggacaacaagaagacgcgcatcatc
cctcgtcacctccagctggccatccgcaacgacgaggaactgaacaagctgctgggcaaa
gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag
acggagagtcaccacaaggcaaagggcaaccaatggacagccagcgcgggattttcaatt
attgttccgcccaatcgggaaaagactgtgcttataaagacggctgcggcggggctagga
gctcgtttttctccccgccgctgcgctggtaagcctgtgttttggttcgctatggcccgt
actaagcagactgctcgcaagtcgaccggcggcaaggccccgaggaagcagctggccacc
aaggcggcccgcaagagcgcgccggccacgggcggggtgaagaagccgcaccgctaccgg
cccggcaccgtagccctgcgggagatccggcgctaccagaagtccacggagctgctgatc
cgcaagctgcccttccagcggctggtacgcgagatcgcgcaggactttaagacggacctg
cgcttccagagctcggccgtgatggcgctgcaggaggccagcgaggcctacctggtgggg
ctgttcgaagacacgaacctgtgcgccatccacgccaagcgcgtgaccattatgcccaag
gacatccagctggcccgccgcatccgtggagagcgggcttaa

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_7|150_aa
MPEPAKFAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKRVHPDTGIWCKAM
GIMNSFLNDIFERIAGEASRLAHYNKRSTITSRRSRRPCACCCPASWPSTPCPRAPRRSP
STPAPNLCNHKSHHYRYIVRIMTNGYHSEF

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_7|453_bp
atgcctgagcctgcaaagttcgcgccggctcccaagaagggctccaagaaagccgtcacc
aaagcccagaagaaagacggcaagaagcgcaagcgcagccgcaaggagagctactccatc
tacgtgtacaaggtgctgaagcgggtccaccccgacaccggcatctggtgcaaggccatg
ggcatcatgaactccttcctcaacgacatcttcgagcgcatcgcgggagaggcgtcccgc
ctggcgcactacaacaagcgctccaccatcacgtcccggagatccagacggccgtgcgcc
tgctgctgcccggcgagctggccaagcacgccgtgtccgagggcaccaaggcggtcacca
agtacgccagctccaaacttgtgcaatcacaaaagtcaccattaccgctacatagtacgt
attatgaccaatggatatcattcagagttctag

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_8|136_aa
MPEPAKFAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKRVHPDTGIWCKAM
GIMNSFLNDIFERIAGEASRLAHYNKRSTITSRRSRRPCACCCPASWPSTPCPRAPRRSP
STPAPIPVDVFGFTSG

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_8|411_bp
atgcctgagcctgcaaagttcgcgccggctcccaagaagggctccaagaaagccgtcacc
aaagcccagaagaaagacggcaagaagcgcaagcgcagccgcaaggagagctactccatc
tacgtgtacaaggtgctgaagcgggtccaccccgacaccggcatctggtgcaaggccatg
ggcatcatgaactccttcctcaacgacatcttcgagcgcatcgcgggagaggcgtcccgc
ctggcgcactacaacaagcgctccaccatcacgtcccggagatccagacggccgtgcgcc
tgctgctgcccggcgagctggccaagcacgccgtgtccgagggcaccaaggcggtcacca
agtacgccagctccaatcccagttgatgtttttggcttcacgtctggttaa

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_9|313_aa
MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
TESHHKAKGNQWTASAGFSIIVPPNREKTVLIKTAAAGLGARFSPRRCAGKPVFWFAMAR
TKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLI
RKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPK
DIQLARRIRGERA

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_9|942_bp
atgtctggtcgtggcaagcaaggaggcaaggcccgcgccaaggccaagtcgcgctcgtcc
cgcgctggccttcagttcccggtagggcgagtgcatcgcttgctgcgcaaaggcaactac
gcggagcgagtgggggccggcgcgcccgtctacatggctgcggtcctcgagtatctgacc
gccgagatcctggagctggcgggcaacgcggctcgggacaacaagaagacgcgcatcatc
cctcgtcacctccagctggccatccgcaacgacgaggaactgaacaagctgctgggcaaa
gtcaccatcgcccagggcggcgtcttgcctaacatccaggccgtactgctccctaagaag
acggagagtcaccacaaggcaaagggcaaccaatggacagccagcgcgggattttcaatt
attgttccgcccaatcgggaaaagactgtgcttataaagacggctgcggcggggctagga
gctcgtttttctccccgccgctgcgctggtaagcctgtgttttggttcgctatggcccgt
actaagcagactgctcgcaagtcgaccggcggcaaggccccgaggaagcagctggccacc
aaggcggcccgcaagagcgcgccggccacgggcggggtgaagaagccgcaccgctaccgg
cccggcaccgtagccctgcgggagatccggcgctaccagaagtccacggagctgctgatc
cgcaagctgcccttccagcggctggtacgcgagatcgcgcaggactttaagacggacctg
cgcttccagagctcggccgtgatggcgctgcaggaggccagcgaggcctacctggtgggg
ctgttcgaagacacgaacctgtgcgccatccacgccaagcgcgtgaccattatgcccaag
gacatccagctggcccgccgcatccgtggagagcgggcttaa

>gi568815597f:149751114_149886974|GENSCAN_predicted_peptide_10|366_aa
MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
KYTSSNQLMKDLNYICKVFLINSKYRFCPYSKGGDLNNGYQGPGLTGAIAEFCLLQEYRG
TLFQASKCRPQSASCPTIQAFHYYRKHLAKDHHHLPVLPLKLTDLAEDIINSDQRTLSLS
NNTTFMGKTVLALTEAVYRAPAVMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRR
LARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRT
LYGFGG

>gi568815597f:149751114_149886974|GENSCAN_predicted_CDS_10|1101_bp
atgcctgaaccggcaaaatccgctccggcccctaaaaagggctccaagaaagccgtcacc
aaagcccagaagaaagacggcaagaagcgcaagcgcagccgcaaagagagctactccatc
tacgtgtacaaggtgctgaagcaggtccaccccgacaccggcatctcgtccaaggccatg
ggcatcatgaactccttcgtcaacgacatcttcgagcgcatcgcgggagaggcttcccgc
ctggcgcactacaacaagcgctccaccatcacatcccgcgagatccagacggccgtgcgc
ctgctgctgcccggcgagctggccaagcacgccgtgtccgagggcaccaaggcggtcacc
aagtacaccagctccaatcaactgatgaaggatcttaactacatctgcaaagttttcttg
attaacagcaagtacaggttctgcccatactcaaagggaggggatttaaacaacgggtac
caggggccaggactcacgggagccatcgcagaattttgcctactacaggaatatagagga
actcttttccaggcaagtaaatgcaggccacagtctgccagctgtccaaccattcaggct
tttcattattataggaagcatctggccaaggaccaccaccatcttcctgtcctgcccctg
aagctcactgacttagctgaggacatcatcaattctgatcaaaggaccctaagtctaagt
aacaataccactttcatggggaagacggtgctcgccttgacagaagctgtctatcgggct
ccagcggtcatgtccggcagaggaaagggcggaaaaggcttaggcaaagggggcgctaag
cgccaccgcaaggtcttgagagacaacattcagggcatcaccaagcctgccattcggcgt
ctagctcggcgtggcggcgttaagcggatctctggcctcatttacgaggagacccgcggt
gtgctgaaggtgttcctggagaatgtgattcgggacgcagtcacctacaccgagcacgcc
aagcgcaagaccgtcacagccatggatgtggtgtacgcgctcaagcgccaggggcgcacc
ctgtacggcttcggaggctag