GENSCAN 1.0 Date run: 3-Nov-116 Time: 18:33:19 Sequence gi568815590r:81358386_81561523 : 203138 bp : 37.41% C+G : Isochore 1 ( 0 - 43 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.07 PlyA - 1564 1559 6 1.05 1.06 Term - 2892 2746 147 0 0 56 32 134 0.864 1.52 1.05 Intr - 5041 4888 154 0 1 56 77 79 0.458 2.75 1.04 Intr - 7452 7282 171 2 0 68 42 114 0.011 2.94 1.03 Intr - 28331 28060 272 2 2 34 71 149 0.001 3.22 1.02 Intr - 31975 31904 72 1 0 90 97 67 0.007 6.48 1.01 Init - 38362 38318 45 1 0 53 106 22 0.009 1.23 1.00 Prom - 58797 58758 40 -4.25 2.00 Prom + 63203 63242 40 -2.65 2.01 Sngl + 69829 70743 915 0 0 42 43 667 0.998 53.66 2.02 PlyA + 70971 70976 6 1.05 3.00 Prom + 71140 71179 40 -6.15 3.01 Init + 71233 72270 1038 0 0 44 41 511 0.894 36.03 3.02 Term + 72558 73424 867 2 0 -14 38 392 0.557 15.68 3.03 PlyA + 73600 73605 6 1.05 4.12 PlyA - 74397 74392 6 1.05 4.11 Term - 80303 79902 402 2 0 40 36 163 0.210 0.47 4.10 Intr - 86216 86115 102 2 0 70 95 75 0.876 5.85 4.09 Intr - 86604 86432 173 1 2 95 84 84 0.979 7.44 4.08 Intr - 89028 88929 100 0 1 52 86 66 0.137 1.56 4.07 Intr - 100048 100004 45 1 0 99 70 31 0.147 0.09 4.06 Intr - 100318 100217 102 1 0 73 103 50 0.940 4.45 4.05 Intr - 100952 100780 173 0 2 71 77 162 0.458 12.14 4.04 Intr - 111178 111121 58 1 1 105 68 -1 0.003 -2.86 4.03 Intr - 121130 121029 102 2 0 89 89 90 0.976 8.65 4.02 Intr - 122213 122041 173 0 2 75 100 144 0.917 13.04 4.01 Init - 124782 124710 73 0 1 46 82 64 0.522 2.88 4.00 Prom - 135839 135800 40 -5.05 5.06 PlyA - 136156 136151 6 1.05 5.05 Term - 163966 163295 672 1 0 32 41 575 0.494 39.96 5.04 Intr - 168736 168635 102 1 0 95 89 97 0.960 9.95 5.03 Intr - 171225 171053 173 1 2 84 100 116 0.966 11.14 5.02 Intr - 181358 181233 126 0 0 122 61 81 0.128 8.53 5.01 Init - 183984 183975 10 0 1 100 113 2 0.647 4.52 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Init - 172930 172858 73 1 1 56 80 74 0.975 4.68 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815590r:81358386_81561523|GENSCAN_predicted_peptide_1|286_aa MEHRNKKVHTEESRKTLKTDDVNITRIIARLLSTDAGDLLPTRTVSAERGTVLLGGRTAV QPPVPGSEDSASSLTSAYHSQCLNVLSGGLKARLPAQLHPLSTRACHSGNYPSQASLPSL APDYSYWSLRNMDAAGGHYPKRINARTENQILNVLTYKWELNIGYTWTQRRKQQTLVLAR GWRVEGDTESIPLSLTQLLSKLELLTPLADNSLSPGLLIDNIAPLVRVPRCMQQKLTVSV YHLMTERPFQRRGFTRKSFAVLKKPLDFPTYSCPNEDKRFQKYDLI >gi568815590r:81358386_81561523|GENSCAN_predicted_CDS_1|861_bp atggagcacagaaataagaaagtacacactgaagagagtagaaaaaccttgaagactgat gatgtcaatattactaggattattgcaagattgctaagtacagatgctggagatttgcta cctacccgcactgtttcagctgagaggggcactgtcctccttggtggcagaactgcagtg cagccaccagtgcctggatctgaggattctgccagcagcctcacttctgcctaccacagt cagtgcctgaatgtactatcagggggcctgaaagccagactaccagcccaattgcatccc ctcagtactagagcatgccattcggggaattacccatctcaggccagtctaccatcattg gcacctgattactcctactggagtctcaggaacatggatgcagctggaggccattatcct aaacgaattaatgcaagaacagaaaaccaaatactgaatgtcctcacttataagtgggag ctaaacattgggtacacatggacacaaagaaggaaacagcagacactggtgcttgcaaga gggtggagggtggaaggagatactgagagcattcctctatcacttactcagttattgtca aagcttgagttactgacacccctggctgacaacagtttaagtcctggcttactcattgat aacattgctcctctagtcagagttcctagatgcatgcaacagaaactgacagtgagtgtc tatcacttaatgacagaaaggccctttcagaggagaggatttacccgaaagagctttgct gttctgaagaagcccctggatttccccacatattcctgtccaaacgaggacaagagattc caaaagtatgatttaatataa >gi568815590r:81358386_81561523|GENSCAN_predicted_peptide_2|304_aa MENDFDELREEGFRRSNYSELQEDVQTKGKEVENFEKNLEECITRITNTEKCLKELMELK TKARELREECRSLRSRCNQLEERVSAMEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVK RPNLHLIGVPESDGENGTKLENTLQDIIQENFPNLARQAKIHIQEIQRTPQRYSSRRATP RHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADLSAETLQARREWGPIFNILKEK NFQPRISYPAKLSFISEGEIKYFTDKQMLRDFVTTRPALKELLKEALNMERNNRYQPLQN HAKM >gi568815590r:81358386_81561523|GENSCAN_predicted_CDS_2|915_bp atggagaatgactttgacgagctgagagaagaaggcttcagacgatcaaattactctgag ctacaggaggacgttcaaaccaaaggcaaagaagttgaaaactttgaaaaaaatttagaa gaatgtataactagaataaccaatacagagaagtgcttaaaggagctgatggagctgaag accaaggctcgagaactacgtgaagaatgcagaagcctcaggagccgatgcaatcaactg gaagaaagggtatcagcaatggaagatgaaatgaatgaaatgaagcgagaagggaagttt agagaaaaaagaataaaaagaaatgagcaaagcctccaagaaatatgggactatgtgaaa agaccaaatctacatctgattggtgtacctgaaagtgatggggagaatggaaccaagttg gaaaacactctgcaggatattatccaggagaacttccccaatctagcaaggcaggccaag attcacattcaggaaatacagagaacgccacaaagatactcctcgagaagagcaactcca agacacataattgtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagcc agggagaaaggtcgggttaccctcaaagggaagcccatcagactaacagcggatctctcg gcagaaaccctacaagccagaagagagtgggggccaatattcaacattcttaaagaaaag aattttcaacccagaatttcatatccagccaaactaagcttcataagtgaaggagaaata aaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaa gagctcctgaaggaagcgctaaacatggaaaggaacaaccggtaccagccgctgcaaaat catgccaaaatgtaa >gi568815590r:81358386_81561523|GENSCAN_predicted_peptide_3|634_aa MGDFNTPLSTLDRSMRQKVNKDTEELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS KIDHILGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWV HNKMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK ELEKQEQTHSKVSRSQEITKTRAELKEIETQKTLQKINESRSWFFERINKIDRLLAILIK KKREKNQIDVIKNDKGDITTDPTEIETTIREYYKHLHANKLENLEEMDKFLNTYTLPRLN QEEIESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELHINRAKDKNHMIIS IDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTR QGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNL LKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKPRNPTYKGREG PLQEELQTTAQGNKRGYKQMEEHSMLMGRKNQYRENGHTAQGNLQIQCHPHQGTNAFLHR IGKNYLKVDMEPKRSPHRQINPKPKEQSWRHHTT >gi568815590r:81358386_81561523|GENSCAN_predicted_CDS_3|1905_bp atgggagactttaacaccccactgtcaacattagacagatcaatgagacagaaagtcaac aaggataccgaggaattgaactcagctctgcaccaagcggacctaatagacatctacaga actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt ataacaaactatctctcagaccacagtgcaatcaaactagaactcaggattaagaatctc actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta cataacaaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa gaactagaaaagcaagagcaaacacattcaaaagttagcagaagccaagaaataactaaa accagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatcc aggagctggttttttgaaaggatcaacaaaattgatagactgctagcaatactaataaag aaaaaaagagagaagaatcaaatagacgtaataaaaaatgataagggggatatcaccacc gatcccacagaaatagaaactaccatcagagaatactacaaacacctccacgcaaataaa ctagaaaatctagaagaaatggataaattcctcaacacatacactctcccaagactaaac caggaagaaattgaatctctgaatagaccaataacaggatctgaaattgtggcaataatc aatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccag aggtacaaggaggaactgcatataaacagagccaaagacaaaaaccacatgattatctca atagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaat aaattaggtattgatgggatgtatctcaaaataataagagctatctatgacaaacccaca gccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggtacaaga cagggatgcccgctctcaccactcctattcaacatagtattggaagttctggccagggca attaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtcc ttgtttgcagacgacatgattgtatatctagaaaaccccattgtctcagcccaaaatctc cttaagctgataagcaactttagcaaagtctcaggatacaaaatcaatgtacaaaaatca caagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactccca ttcacaattgcttcaaagagaataaaacctaggaatccaacttacaagggacgtgaagga cctcttcaagaagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaatg gaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcc caaggtaatttacagattcaatgccatccccatcaaggtaccaatgcctttcttcacaga attggaaaaaactacttgaaagttgatatggaaccaaaaaggagcccgcatcgccaaatc aatcctaagccaaaagaacaaagctggaggcatcacactacctga >gi568815590r:81358386_81561523|GENSCAN_predicted_peptide_4|500_aa MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVVIII KNLTTKIISGPLGVTGVNFAARNMAGLVKPTVTISVDGKMMTIRTESSFQDTKISFKLGE EFDETTADNRKVKSTITLENGSMIHVQKWLGKETTIKRKIVDEKMVVECKMNNIVSTRIY EKNCVELSPITMSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDI ITIRTESTFKNTEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKL VNGKMVASTQMRGSQKNNSSNITKLVSLTLPKDHTSSPAMDSSQDEISELPEKEFRTLIL KLIREAPEKSELQLKEIKDVIQDMKGKFCEIGSINKKQSHLLEIKDTLREMQNALETLSN RIKQAEERSSELEDKAFELI >gi568815590r:81358386_81561523|GENSCAN_predicted_CDS_4|1503_bp atgtgtgatgcttttgtaggtacctggaaacttgtctccagtgaaaactttgatgattat atgaaagaagtaggagtgggctttgccaccaggaaagtggctggcatggccaaacctaac atgatcatcagtgtgaatggggatgtgatcaccattaaatctgaaagtacctttaaaaat actgagatttccttcatactgggccaggaatttgacgaagtcactgcagatgacaggaaa gtcaagagcaccataaccttagatgggggtgtcctggtacatgtgcagaaatgggatgga aaatcaaccaccataaagagaaaacgagaggatgataaactggtggtggtcatcataata aaaaatctcacaacaaagataatctctggacctcttggcgtcacaggagtgaatttcgca gcccggaacatggcagggttagtgaaaccgacagtaactattagtgttgatgggaaaatg atgaccataagaacagaaagttctttccaggacactaagatctccttcaagctgggggaa gaatttgatgaaactacagcagacaaccggaaagtaaagagcaccataacattagagaat ggctcaatgattcacgtccaaaaatggcttggcaaagagacaacaatcaaaagaaaaatt gtggatgaaaaaatggtagtggaatgtaaaatgaataatattgtcagcaccagaatctac gaaaagaactgtgttgagctctcacccatcacgatgagcaacaaattcctgggcacctgg aaacttgtctctagtgagaactttgacgattacatgaaagctctgggtgtggggttagcc accagaaaactgggaaatttggccaaacccactgtgatcatcagcaagaaaggagatatt ataactatacgaactgaaagtacctttaaaaatacagaaatctccttcaagctaggccag gaatttgaagaaaccacagctgacaatagaaagaccaagagcatcgtaaccctgcagaga ggatcactgaatcaagtgcagagatgggatggcaaagagacaaccataaagagaaagcta gtgaatgggaaaatggtagcgtccacccaaatgagagggagccagaaaaacaattctagt aatataacaaaacttgtttctttaacactcccaaaagatcataccagctcaccagcaatg gattcaagccaagatgaaatctctgaattgccagaaaaagaattcagaacgttgattctt aagctaatcagggaggcaccagagaaaagtgaactccaacttaaagaaatcaaagacgtg atacaagatatgaaaggaaaattctgtgaaataggtagcataaataaaaaacaatcacat cttctggaaataaaggacacacttagagaaatgcaaaatgcactggaaactctcagcaat agaatcaaacaagcagaagaaagaagttcagagcttgaagacaaggcttttgaattaatc taa >gi568815590r:81358386_81561523|GENSCAN_predicted_peptide_5|360_aa MPQGIPCIILICLNHMIAQKQTAPASQHSTLRAAFSEQSAEILKQSIGRASRKLGRLAKP TVTISTDGDVITIKTKSIFKNNEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWD GKETTITRKLVDGKMVVPGRPPIASRPSPLHRPLRPPQGPPAAAPAPPLQPPLFSRRHGD PVHLAGAPGLQPGLRGRHQPPHQPGALRLLLLPVHVLYFDRDDVALKNFAKYFLYQSHEE REHAEKLMKLQNQRGGRIFLQDIKKPDCDDWESGLNAMECALYLEKNVNQSLLELYKLAT DKNDPHLCDFIETHYLNEQVKAIKELSDHVTNLRKMGAPESGSAEYLFDKHTLGDSDNES >gi568815590r:81358386_81561523|GENSCAN_predicted_CDS_5|1083_bp atgccccaaggaattccgtgtattattttgatttgtctgaatcacatgattgctcagaag cagacagcaccagcaagccagcactcaaccctaagagcagccttcagtgagcagtctgct gaaattctaaaacagagtataggaagagccagcaggaaactgggccgtttggcaaaaccc actgtgaccatcagtacagatggagatgtcatcacaataaaaaccaaaagcatctttaaa aataatgagatctcctttaagctgggagaagagtttgaggaaatcacgccaggtggccac aaaacaaagagtaaagtaaccttagataaggagtccctgattcaagttcaggactgggat ggcaaagaaaccaccataacgagaaagctggtggatgggaaaatggtggtgcccggccgg ccgcccatagccagccgtccgtcacctcttcaccgccccctcagaccgccccaaggtccc cccgccgccgctccagcgccgccgctgcagccgcctctctttagtcgccgccatggcgac cccgtccacctcgcaggagcgccaggactacaaccaggactcagaggccgccatcaaccg ccacatcaacctggagctctgcgcctcctacttttacctgtccatgtcttatactttgac cgcgatgatgtggctttgaagaactttgccaaatactttctttaccaatctcatgaggag agggaacatgctgagaaactgatgaagctgcagaaccaacgaggtggccgaatcttcctt caggatatcaagaaaccagactgtgatgactgggagagcgggctgaatgcgatggagtgt gcattatatttggaaaaaaatgtgaatcagtcactactggaactgtacaaactggccact gacaaaaatgacccccatttgtgtgacttcattgagacacattacctgaatgagcaggtg aaagccatcaaagaattgagtgaccacgtgaccaacttgcgcaagatgggagcgcccgaa tctggctcggcagaatatctcttcgacaagcacaccctgggagacagtgataatgaaagc taa