GENSCAN 1.0	Date run:  3-Nov-116	Time: 18:40:06

Sequence gi568815594r:173288344_173491414 : 203071 bp : 38.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3765   3931  167  0  2  114   90    90 0.986  10.48
 1.02 Intr +   7053   7183  131  1  2   86   91   193 0.999  18.89
 1.03 Intr +   7421   7500   80  1  2   80   92    16 0.869  -1.37
 1.04 Intr +  13704  13821  118  0  1   94   87    74 0.176   7.45
 1.05 Intr +  15653  15775  123  1  0   92  113    77 0.999  10.46
 1.06 Intr +  25615  25833  219  0  0   85  100   193 0.988  17.78
 1.07 Intr +  29291  29389   99  1  0   88   97    29 0.889   3.19
 1.08 Intr +  30088  30216  129  0  0  130   61    76 0.995   9.07
 1.09 Term +  33237  33374  138  2  0   90   44    71 0.813  -0.12
 1.10 PlyA +  33384  33389    6                               1.05

 2.07 PlyA -  33660  33655    6                               1.05
 2.06 Term -  43895  43737  159  2  0   56   36   371 0.975  25.66
 2.05 Intr -  44652  44478  175  2  1  125   87   134 0.999  16.02
 2.04 Intr -  44871  44726  146  0  2   91  103   184 0.999  18.36
 2.03 Intr -  45326  45157  170  0  2   96  100   225 0.961  23.24
 2.02 Intr -  45870  45701  170  2  2   88   34   118 0.745   5.07
 2.01 Init -  54967  54882   86  1  2   50   34   111 0.324   0.24
 2.00 Prom -  64034  63995   40                              -5.15

 3.03 PlyA -  64910  64905    6                               1.05
 3.02 Term -  71252  71056  197  0  2   46   38   177 0.764   5.09
 3.01 Init -  71486  71333  154  2  1   60   73    88 0.862   4.70
 3.00 Prom -  75326  75287   40                              -4.05

 4.00 Prom +  80692  80731   40                              -9.35
 4.01 Init +  81775  81855   81  0  0   72   58    57 0.541   2.12
 4.02 Intr +  82223  82350  128  1  2   85   41    67 0.669   0.26
 4.03 Intr +  82665  82968  304  0  1   67   40   380 0.680  26.77
 4.04 Intr +  85047  85172  126  2  0   78   61    92 0.960   5.46
 4.05 Term +  88862  88984  123  1  0  111   49    65 0.963   2.30
 4.06 PlyA +  89170  89175    6                               1.05

 5.11 PlyA -  89211  89206    6                               1.05
 5.10 Term - 103085 102826  260  0  2  106   49   123 0.056   4.93
 5.09 Intr - 110900 110783  118  2  1  119   81     6 0.117   2.12
 5.08 Intr - 111983 111888   96  2  0   96   18   103 0.151   3.39
 5.07 Intr - 117119 117047   73  1  1   59   60    74 0.156   0.19
 5.06 Intr - 122050 121674  377  1  2   74  123    99 0.106   4.89
 5.05 Intr - 125701 125629   73  0  1   76   77    28 0.048  -1.01
 5.04 Intr - 131218 131002  217  2  1  -34   60   402 0.353  21.84
 5.03 Intr - 131645 131324  322  2  1   14   68   265 0.030  11.61
 5.02 Intr - 141397 141203  195  1  0   79   97    67 0.167   5.39
 5.01 Init - 148435 148403   33  1  0   79   97    33 0.150   3.22
 5.00 Prom - 156798 156759   40                              -3.65

 6.04 PlyA - 157725 157720    6                               1.05
 6.03 Term - 164001 163936   66  0  0  107   39    90 0.476   2.96
 6.02 Intr - 177743 177561  183  2  0   69  116    65 0.136   6.46
 6.01 Intr - 193771 193718   54  1  0   90  101    28 0.149   2.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 153906 154115  210  2  0   72   32   148 0.880   3.91


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:173288344_173491414|GENSCAN_predicted_peptide_1|401_aa
XCKYWHYDENLLTSSVVIVFHNEGWSTLMRTVHSVIKRTPRKYLAEIVLIDDFSNKEHLK
EKLDEYIKLWNGLVKVFRNERREGLIQARSIGAQKAKLGQVLIYLDAHCEVAVNWYAPLV
APISKDRSPAMAGGLFAIEREFFFELGLYDPGLQIWGGENFEISYKIWQCGGKLLFVPCS
RVGHIYRLEGWQGNPPPIYVGSSPTLKNYVRVVEVWWDEYKDYFYASRPESQALPYGDIS
ELKKFREDHNCKSFKWFMEEIAYDITSHYPLPPKNVDWGEIRGFETAYCIDSMGKTNGGF
VELGPCHRMGGNQLFRINEANQLMQYDQCLTKGADGSKVMITHCNLNEFKEWQYFKNLHR
FTHIPSGKCLDRSEVLHQVFISNCDSSKTTQKWEMNNIHSV

>gi568815594r:173288344_173491414|GENSCAN_predicted_CDS_1|1206_bp
nnatgcaagtattggcattatgatgaaaacttgctcacttcgagcgttgtcattgtcttc
cataatgaaggatggtcaaccctcatgagaacagtccacagtgtaattaaaaggactcca
aggaaatatttagcagaaattgtgttaattgacgatttcagtaataaagaacacttaaaa
gaaaaactggatgaatatattaagctgtggaatggcctagtgaaggtatttcgaaatgaa
agaagggaaggtttaattcaagcacgaagtattggtgctcagaaggctaaacttggacag
gttttgatataccttgatgcccactgtgaggtggcagttaactggtatgcaccacttgta
gctcccatatctaaggacaggtccccagccatggctgggggattatttgccattgaacga
gagttcttctttgaattgggtctctatgatccaggtctccagatttggggtggtgaaaac
tttgagatctcatacaagatatggcagtgtggtggcaaattattatttgttccttgttct
cgtgttggacatatctaccgtcttgagggctggcaaggaaatcctccgcccatttatgtt
gggtcttctccaactctgaagaattatgttagagttgtggaggtttggtgggatgaatat
aaagactacttctatgctagtcgtcctgaatcgcaggcattaccatatggggatatatcg
gagctgaaaaaatttcgagaagatcacaactgcaaaagttttaagtggttcatggaagaa
atagcttatgatatcacctcacactaccctttgccacccaaaaatgttgactggggagaa
atcagaggcttcgaaactgcttactgcattgatagcatgggaaaaacaaatggaggcttt
gttgaactaggaccctgccacaggatgggagggaatcagcttttcagaatcaatgaagca
aatcaactcatgcagtatgaccagtgtttgacaaagggagctgatggatcaaaagttatg
attacacactgtaatctaaatgaatttaaggaatggcagtacttcaagaacctgcacaga
tttactcatattccttcaggaaagtgtttagatcgctcagaggtcctgcatcaagtattc
atctccaattgtgactccagtaaaacgactcaaaaatgggaaatgaataacatccatagt
gtttag

>gi568815594r:173288344_173491414|GENSCAN_predicted_peptide_2|301_aa
MEGIFAFLLAPASAMLCSTTLTPGVARIGASTRSRRSGSRGLTRRAAFGVRAGEGWVCGG
PAGSRRRRKLPLTGPGSGSFQCRSRGGRGSVNMGKGDPNKPRGKMSSYAFFVQTCREEHK
KKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEDMAKSDKARYDREMKNYVPPKGDKKGK
KKDPNAPKRPPSAFFLFCSEHRPKIKSEHPGLSIGDTAKKLGEMWSEQSAKDKQPYEQKA
AKLKEKYEKDIAAYRAKGKSEAGKKGPGRPTGSKKKNEPEDEEEEEEEEDEDEEEEDEDE
E

>gi568815594r:173288344_173491414|GENSCAN_predicted_CDS_2|906_bp
atggaaggcatttttgcttttcttctggctccggcctctgcaatgctgtgctctactacc
ctgactccaggagtggcccgaataggagcctctactcggtctcggcgcagtggctctcgg
ggtctgacccggcgagcggcatttggggtgcgggccggcgagggctgggtctgtggaggg
ccggcgggcagtcggaggaggcggaaactgcccctgaccgggcccggttctgggagtttt
caatgtcggtcacgaggtggacgcggatctgtcaacatgggtaaaggagaccccaacaag
ccgcggggcaaaatgtcctcgtacgccttcttcgtgcagacctgccgggaagagcacaag
aagaaacacccggactcttccgtcaatttcgcggaattctccaagaagtgttcggagaga
tggaagaccatgtctgcaaaggagaagtcgaagtttgaagatatggcaaaaagtgacaaa
gctcgctatgacagggagatgaaaaattacgttcctcccaaaggtgataagaaggggaag
aaaaaggaccccaatgctcctaaaaggccaccatctgccttcttcctgttttgctctgaa
catcgcccaaagatcaaaagtgaacaccctggcctatccattggggatactgcaaagaaa
ttgggtgaaatgtggtctgagcagtcagccaaagataaacaaccatatgaacagaaagca
gctaagctaaaggagaaatatgaaaaggatattgctgcatatcgtgccaagggcaaaagt
gaagcaggaaagaagggccctggcaggccaacaggctcaaagaagaagaacgaaccagaa
gatgaggaggaggaggaggaagaagaagatgaagatgaggaggaagaggatgaagatgaa
gaataa

>gi568815594r:173288344_173491414|GENSCAN_predicted_peptide_3|116_aa
MKLQTLVVSVTVLKDGVSGVCSFRCSDVSRVSSFRWACGLADLRSEATDLCRMKPQTLAV
SVTAHKGGVDPKSEQQQDLLSRAKEQSFHGRGPKQVAAAGSGGQLLFPYVALPTSR

>gi568815594r:173288344_173491414|GENSCAN_predicted_CDS_3|351_bp
atgaagctgcagaccctcgtggtgagtgttacagttcttaaagatggtgtgtccggagtt
tgttccttcagatgttcagatgtgtccagagtttcttccttccggtgggcttgtggtctc
gctgacttaaggagtgaagccacagacctttgcagaatgaagccacagacactcgcagtg
agtgttacagctcataaaggtggtgtggacccaaagagtgagcagcagcaagatttattg
tcaagagcgaaagaacaaagcttccatggaaggggacctaagcaggttgccgctgctggc
tcaggtggccagcttttattcccttatgtggccctgcccacgtcccgctga

>gi568815594r:173288344_173491414|GENSCAN_predicted_peptide_4|253_aa
MEKVGRGGEKEPCCQLVRTPPQEAANLESRNFSENQFYDIPAAKHSPNSLETERARENTV
NPNHTLLFSRTVHCFGASRDQQARDSWCLAVPLSNLVCRVNCRCRSGERRSGQERGDFCQ
RRPRELGDMNGFTPDEMSRGGDAAAAVAAVVAAAAAAASAGNGTGAGTGAEARHLYICDY
HKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEIVGCHFRSIPVNEKDTLTYFIYSVKND
KNKSDLKVDSGVH

>gi568815594r:173288344_173491414|GENSCAN_predicted_CDS_4|762_bp
atggaaaaggttgggcgtggaggtgaaaaggagccctgttgtcaactggtccgtactcca
cctcaggaggcggccaacttggagtcgaggaacttctctgaaaaccaattctacgatatt
ccagcagctaaacacagcccgaattccctagaaacagagagagcgagagaaaacactgta
aaccccaatcacacgctcctgttttcccgcactgtccactgtttcggtgccagcagagac
cagcaggcccgggacagttggtgtttggccgtgccgctgtctaacttggtgtgcagagtg
aattgccgctgccggagcggagagaggcggagcggccaggagagaggggatttctgtcag
cgccggcctcgggagctcggagacatgaacggcttcacgcctgacgagatgagccgcggc
ggggatgcggccgccgcagtggccgcagtggtcgctgccgcggccgccgccgcctcggcg
gggaacgggaccggcgcgggcaccggggctgaggcaaggcatctttacatatgtgattat
cataaaaacttaattcagagtgttcgaaacagaagaaagagaaaagggagtgatgatgat
ggaggtgattcacctgttcaagatattgataccccagagatagttggttgccactttagg
tctattccagtgaatgaaaaagacaccttaacatatttcatctactcagtgaagaatgac
aagaacaaatcagatctcaaggttgatagtggtgttcactag

>gi568815594r:173288344_173491414|GENSCAN_predicted_peptide_5|587_aa
MKVSYSLTEKQTYIENVFLGKVKRKFVQLCACLNRQYNPYGESSSSFCSPLTNKVQNFLR
MGSVAHSYNHKLWEAKDDRDIICQVAYARIEGAMIVCTKYGVKAGLTNYAAAYCTGLLLA
RRLLNRLGMDKIYEGQVEVTGNEYNVESIDGQPGAFTCYLVADLARTTTGNKVFGAPKGA
VDGEVHRKHIMGQKFADDLRYLIEEDENASKKQFSQYTKNSVTPDLMEEMYKKAHAAVRE
NPVYEKKPKKEIKKKRYTISLSKDLQTCSLNLGHILPIIKEWPCCYGTLHRQQGSTVHMD
AQDNSLLGLHSHNQPLFPKHDSFAKVAGYNWASNHSYTQDLEQAVPTNLYALVLNLSLSQ
TLSSWETSVRAILALQKVLLRLNLKWDGDPFPRSSSLSSWRIFSTRVYYGKGEKKSKCAV
EPHNENDLSQMINSIIVQRPKPLKVNKISYLYAKHKHLSGHQSWLEQRVCRSQARDKADK
GSFVKKLLPAPPLFSFCPNSPRPKAKMKLMVLVFTIGLTLLLGVQAMPANRLSCYRKILK
DHNCHNLPEGVADLTQIDVNVQDHFWDGKGCEMICYCNFSELLCCPK

>gi568815594r:173288344_173491414|GENSCAN_predicted_CDS_5|1764_bp
atgaaggtgtcttactcccttactgaaaaacagacttacattgaaaatgtcttcttaggc
aaagtgaaaagaaaatttgtgcaattatgtgcctgtctcaatcgacaatacaatccatat
ggagagagcagctcctccttctgctcacccctcacgaacaaggttcaaaattttctcagg
atgggttcagtggctcattcctataatcacaagctttgggaagctaaggatgatagagat
atcatttgtcaggttgcttatgcccgtatagagggggctatgatagtctgcacaaaatat
ggtgtgaaggccggcctgacaaattatgctgcagcgtattgtactggcctgctgctggcc
cgcaggcttctcaataggttaggcatggacaagatctatgaaggccaagtggaggtgact
ggcaatgaatacaatgtggaaagcattgatggtcagccaggtgcctttacctgctatttg
gtcgcagaccttgccagaactaccactggcaataaagtgtttggtgccccgaagggagct
gtggatggagaagtacaccggaagcacatcatgggccagaagtttgcagatgacctgcgc
tacttaatagaagaagatgaaaatgcttccaaaaaacagttctctcaatacacaaagaac
agcgtaactccagacttgatggaggagatgtataagaaagctcatgctgctgtacgagag
aatccagtctatgaaaagaagcccaagaaagaaattaaaaagaagaggtacacaataagc
ctttccaaggatctccaaacttgttccctcaatcttggacacattctgcccattatcaag
gaatggccttgctgctatggaacactgcacaggcagcagggtagcactgtgcatatggac
gcccaagacaacagcttattgggtttacactcacacaatcagccactgttccctaaacat
gacagctttgccaaagtggctgggtataattgggcttctaaccacagctacacacaggat
ctagaacaagctgtccccacaaacctctacgctctggtgttgaacctgtcactgagccag
actctctcttcttgggagacctcagtcagagctatcttagcccttcagaaagttttactt
aggttgaatctcaaatgggacggagatcccttccccaggtcttcatccctttcctcctgg
aggatctttagcactcgagtgtactatggaaagggggagaaaaagagtaaatgtgcagtg
gagccacataacgaaaacgacttgagccagatgattaacagtatcatcgtccaaaggccc
aagcctttgaaagttaataaaatttcctatctctatgctaaacataaacacttaagtggt
catcagtcctggctggagcagcgagtctgtcgatcccaggccagagacaaggcagacaaa
ggttcatttgtaaagaagctccttccagcacctcctctcttctccttttgcccaaactca
cccaggccaaaagccaaaatgaaactgatggtacttgttttcaccattgggctaactttg
ctgctaggagttcaagccatgcctgcaaatcgcctctcttgctacagaaagatactaaaa
gatcacaactgtcacaaccttccggaaggagtagctgacctgacacagattgatgtcaat
gtccaggatcatttctgggatgggaagggatgtgagatgatctgttactgcaacttcagc
gaattgctctgctgcccaaagtaa

>gi568815594r:173288344_173491414|GENSCAN_predicted_peptide_6|100_aa
EMNSSNFIMITQPPNQDNTGHFVHKWSLNQGEGDLVPNLCQVSFIAGNYPLCLKGSFGEK
EMTLPSYLGRRTTCPMCTKPTQHENKEDEDLSDDPPPFNE

>gi568815594r:173288344_173491414|GENSCAN_predicted_CDS_6|303_bp
gaaatgaattccagcaattttataatgatcactcaaccaccaaatcaagataatactggc
cattttgtacacaaatggtctttaaaccaaggggaaggggatttggttccaaatttgtgc
caagtatcctttattgctggtaattatcctctctgtttgaaaggaagttttggagaaaag
gaaatgacactcccttcatacctgggaagacgaaccacttgcccgatgtgcacaaagccc
actcaacatgaaaataaagaggatgaagacctctctgatgatccacctccattcaatgaa
tag