GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:33:18

Sequence gi568815591f:74797652_75005671 : 208020 bp : 48.11% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 Intr -    614     22  593  0  2   38   57   546 0.943  38.82
 1.13 Intr -   4362   4319   44  2  2  108   94   -12 0.346  -0.72
 1.12 Intr -   5830   5647  184  2  1  108  111   147 0.997  17.85
 1.11 Intr -   7209   7126   84  1  0   72  111    43 0.965   4.79
 1.10 Intr -   9360   9283   78  1  0   76   80    73 0.962   4.82
 1.09 Intr -  11522  11457   66  0  0   64   96    73 0.866   4.58
 1.08 Intr -  13301  13245   57  0  0   98   72    44 0.859   2.66
 1.07 Intr -  21946  21903   44  0  2  128   68    45 0.971   4.38
 1.06 Intr -  22372  22318   55  2  1  103   93    16 0.577   1.64
 1.05 Intr -  24804  24776   29  2  2   87  106    -8 0.383  -1.34
 1.04 Intr -  25156  24973  184  2  1   73   29   120 0.503   3.45
 1.03 Intr -  35292  35154  139  0  1   91   43   156 0.894  11.44
 1.02 Intr -  38732  38629  104  0  2   95   81    70 0.621   6.89
 1.01 Init -  51941  51461  481  2  1   87  110   331 0.649  30.72
 1.00 Prom -  67209  67170   40                              -3.46

 2.07 PlyA -  67281  67276    6                               1.05
 2.06 Term -  85390  85235  156  1  0   81   47    95 0.705   2.63
 2.05 Intr -  85812  85698  115  2  1   84   56    66 0.691   3.45
 2.04 Intr -  86184  86131   54  2  0  108   -1   118 0.669   2.99
 2.03 Intr -  86572  86493   80  1  2  109   78    81 0.969   7.55
 2.02 Intr -  90148  90032  117  1  0   79   98   114 0.951  12.16
 2.01 Init -  90582  90553   30  0  0   59   47    68 0.933  -2.30
 2.00 Prom -  92135  92096   40                             -10.35

 3.00 Prom +  92142  92181   40                              -5.36
 3.01 Sngl +  92506  93186  681  0  0   67   54   324 0.976  21.09
 3.02 PlyA +  93976  93981    6                               1.05

 4.00 Prom +  94748  94787   40                              -7.56
 4.01 Init +  96138  96205   68  2  2   76   48    50 0.939   0.34
 4.02 Intr +  96467  96606  140  2  2   50  111    96 0.952   8.21
 4.03 Intr +  98495  98581   87  0  0   62   97    97 0.994   7.94
 4.04 Intr +  98758  98860  103  2  1   42   44    41 0.985  -5.67
 4.05 Intr + 100001 100184  184  2  1   81   87   156 0.924  14.59
 4.06 Term + 105187 105243   57  0  0   25   48    95 0.278  -3.11
 4.07 PlyA + 105480 105485    6                               1.05

 5.11 PlyA - 106676 106671    6                               1.05
 5.10 Term - 108120 108016  105  0  0  107   43    91 0.998   4.91
 5.09 Intr - 109444 109201  244  0  1   80   90   271 0.969  24.00
 5.08 Intr - 112197 112067  131  0  2   53   17    94 0.788  -1.71
 5.07 Intr - 113244 113186   59  1  2   86  116    35 0.946   4.70
 5.06 Intr - 114496 114278  219  2  0   42   54   265 0.578  16.77
 5.05 Intr - 115675 115500  176  0  2   42   94    97 0.288   5.28
 5.04 Intr - 116082 115941  142  1  1   76   31    40 0.335  -3.49
 5.03 Intr - 118891 118811   81  2  0   37   89    69 0.324   1.51
 5.02 Intr - 134402 134234  169  2  1   91   75   123 0.967  10.82
 5.01 Init - 135215 135207    9  2  0  100   62     3 0.487  -0.66
 5.00 Prom - 139409 139370   40                              -7.36

 6.00 Prom + 139537 139576   40                              -3.16
 6.01 Init + 155439 155523   85  2  1   79   77    47 0.773   3.68
 6.02 Intr + 166847 167447  601  0  1   75  115   301 0.039  23.07
 6.03 Intr + 169338 169365   28  0  1  120   60    -1 0.272  -1.58
 6.04 Term + 174826 174921   96  0  0   75   42   103 0.258   2.37
 6.05 PlyA + 175870 175875    6                               1.05

 7.03 PlyA - 176928 176923    6                              -0.45
 7.02 Term - 178948 178827  122  2  2   85   42    76 0.536   1.34
 7.01 Init - 179119 178990  130  1  1   67   97    35 0.450   2.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 132941 132859   83  0  2   77   50    74 0.909   0.36
S.002 Term + 156342 156388   47  1  2  100   54    47 0.850  -0.13


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:74797652_75005671|GENSCAN_predicted_peptide_1|714_aa
MAPKHKSSDAGNLDRPKRSRKVLPLSEKVKVLDLIRKDKKSYAEVAKIYGKNESSIREIV
KKEKEIRASFAVSPPTAKVTATVRDKCLVKMEQALHLWVEEMNRKRVPIDSNMLRQKALS
LYQDFCKGCSETDTKPFTASKGWLHRFRHRFSHHYKKKKKGIMAQVAVSTLPVEEESSSE
TRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAK
YCKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFI
INRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGSHPSSTSNEVIEME
LPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLS
SIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGY
LEISSMRRILEAAEFIKFTVIRPLPGLELSNGEYSTVGKRKIDQEGRVFQEKWERAYFFV
EVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYMERMRDEKLHELKKGLRKYLLG
SSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINN
TTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFSRVEKSLKNFCIDWSKL

>gi568815591f:74797652_75005671|GENSCAN_predicted_CDS_1|2142_bp
atggccccaaagcacaagagtagtgatgctgggaatttggataggccaaagagaagccgt
aaagtgcttcctctaagtgaaaaggtgaaagttctcgacttaatcaggaaagacaaaaaa
tcctatgctgaggttgctaagatctacgggaagaatgaatcttccatccgtgaaattgtg
aagaaggaaaaagaaattcgtgctagttttgctgtctcacctccaactgctaaagtgacg
gccacagtgcgtgataagtgcttagttaagatggaacaggcactgcatttgtgggtggaa
gagatgaacagaaaacgtgttcccattgacagcaacatgttgcgccagaaagctttgagc
ctataccaagacttctgcaagggatgctctgaaactgacaccaagccatttactgcgagt
aagggatggttacacagattcaggcatagattctcacatcattacaagaagaagaagaag
gggatcatggcccaggtagcagtgtccaccctgcctgttgaagaagagtcctcctcagag
accaggatggtggtgacattcctcgtgtctgccctcgaatccatgtgtaaagaactggcc
aagtccaaggcagaagtggcctgcatcgcagtgtacgaaacagacgtgtttgtcgtcgga
accgagagaggatgcgcttttgttaatgccaggacggattttcagaaagattttgcaaaa
tactgtaaagccttagggacaacagtgatggtgcctgttccctatgagaagatgctgcga
gaccagtcggctgtggtagtgcaggggcttccggaaggcgttgcctttcaacaccctgag
aattacgaccttgcaaccctgaaatggattttggagaacaaagcagggatttcattcatc
ataaatagacccttcctaggaccagagagtcagctgggtggccctgggatggtaacagat
gcggagagatccatagtatcaccaagtgaaagctgcggccccatcaatgtgaaaactgaa
cccatggaagattctggaagccacccttcttccacaagcaatgaagtaatagaaatggaa
ttaccaatggaagattccactccgctggtcccttcagaagaaccaaatgaggaccctgaa
gccgaggtgaaaatcgaaggaaacacaaattcatccagtgttacaaattctgcagcaggt
gttgaagatcttaacatcgttcaagtgactgttccagataatgagaaggaaagattatca
agcattgaaaagattaaacagctaagagaacaagttaatgacctctttagccgaaaattt
ggtgaagcaattggcgtggatttccctgtgaaagttccctacaggaagatcacattcaac
cctggctgtgtggtgattgatggcatgcccccgggggtggtattcaaggcccccggctat
ctggaaatcagttccatgaggaggatcttggaggcagctgagtttatcaaattcacagtc
atcaggccgcttccagggcttgagctcagtaatggtgagtattctacagtgggaaaacgc
aagatagaccaggagggccgtgtgtttcaagaaaagtgggagagagcgtatttcttcgtg
gaagtacagaatattccaacatgtctcatatgcaaacaaagcatgtctgtgtccaaagaa
tataacctaagacgccactatcaaaccaatcacagcaagcattatgaccagtatatggaa
agaatgcgtgacgagaagcttcacgagctgaaaaaagggctcaggaagtatctcttaggc
tcatcagacaccgagtgtcccgagcaaaaacaagtgtttgcaaacccaagtccaacccag
aaatcccccgtgcagcctgtagaggacctagctgggaacttatgggagaagttacgtgaa
aaaatcaggtcttttgtggcatattctatcgcaatcgatgagatcacggatataaataat
accacccagttggccatattcatccgtggtgtcgatgagaatttcgatgtgtccgaagaa
cttctggacacggtgcccatgacgggtacaaaatctggcaacgagatcttttcgcgtgtt
gagaaaagcctgaaaaacttctgtatcgactggtcgaaatta

>gi568815591f:74797652_75005671|GENSCAN_predicted_peptide_2|183_aa
MARTLGAELAVAKYPKKGSQAVHRHSRKQSEPPANDIFNAAKAAKSDMQDWMVSMIVDRE
YSVAVEAVRLLILILKNMEGVLMDVDCESVYPIVLFYPECEIRTMGGREQRQSPGAQRTF
FQLLLSFFVESKLHDHAAYLVDNLWDCAGTQLKDWEGLTSLLLEKDQSTCHMEPGPGTFH
LLG

>gi568815591f:74797652_75005671|GENSCAN_predicted_CDS_2|552_bp
atggcacgaaccctgggggcagagctggcagtggcaaaatatccaaagaaagggtcccaa
gcggtacatcgtcatagccggaaacagtcagagccaccagccaatgatattttcaatgct
gcgaaagctgccaaaagtgacatgcaggactggatggtttccatgatcgtggacagagag
tacagtgtggcagtggaggccgtcagattactgatacttatccttaagaacatggaaggg
gtgctgatggacgtggactgtgagagcgtctaccccattgtacttttctaccctgagtgc
gagataagaacgatgggtggaagagagcaacgccagagcccaggcgcccagaggactttc
ttccagcttctgctgtccttctttgtggagagcaagctccacgaccacgctgcttactta
gtagacaacctgtgggactgtgcagggactcagctgaaggactgggagggtctgacaagc
ctgctgctggagaaggaccagagcacgtgccacatggagccagggccagggaccttccac
ctcctagggtga

>gi568815591f:74797652_75005671|GENSCAN_predicted_peptide_3|226_aa
MPGWGRESVGTHSIRPRGTRASTRPPRVRSGRGAPRSYLQVASAKCWAAAPAVHVGEPVH
AGGLHTERGADPVIGLYLVHRHGATKAREGGACQTPTVGNRQTPTVRNRQTPTLGNRQTP
TLGIHARPRRRATTSLLTLLRAFGKKKRSPVCSDWSRLFDVTDSTFDRATRRKGETGSIF
SAPPGKGGAQRRKQPMGAQEAGRLWEPWRALSQSPRRIRCCILGES

>gi568815591f:74797652_75005671|GENSCAN_predicted_CDS_3|681_bp
atgccggggtggggccgcgaatcggttgggacgcactctatccggcctaggggcacccgg
gccagcacccggccgccgcgcgtgcgcagtgggcggggggccccgcgctcctacctgcaa
gtggccagtgccaagtgctgggccgccgctcctgccgtgcatgttggggagccagtacat
gcaggtgggctccacacggagaggggcgcagaccccgtgatagggctttacctggtacat
cggcatggcgcaaccaaagcaagagagggtggcgcgtgccagacaccaacggtcggaaac
cgccagacaccaacggtcagaaaccgccagacaccaacgctcggaaaccgccagacacca
acgctcggaatacacgccagaccacgacggagggcgaccacctcccttctgaccctgctg
cgggcgttcggaaaaaaaaaacgcagtccggtgtgctctgattggtccaggctctttgac
gtcacggactcgacctttgacagagccactaggcgaaaaggagagacgggaagtattttt
tccgccccgcccggaaagggtggagcacaacgtcgaaagcagccaatgggagcccaggag
gcggggcgcctgtgggagccgtggagggcactttcccagtccccgaggcggatccggtgt
tgcatccttggagagagctga

>gi568815591f:74797652_75005671|GENSCAN_predicted_peptide_4|212_aa
MLSVFKKEDTIIAKDFGNLRDTITEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKKIVEN
SLDAGATNIDLKLKDYGMDLIEVSGNGCGVEEENFKGLTLKHHTSKIQEFADLTRVETFG
FRGEALSSLCALSDVTISTCHVSAKVGTRLVFDHDGKIIQKTPYPHPRGTTVSVKQLFST
LPVRHKEFQRNIKKPVGEKYMRSVDTQACSCI

>gi568815591f:74797652_75005671|GENSCAN_predicted_CDS_4|639_bp
atgctttcagttttcaagaaagaagacaccattattgccaaagattttggtaatttgaga
gatacaattacagaacctgctaaggccatcaaacctattgatcggaagtcagtccatcag
atttgctctgggcaggtggtactgagtctaagcactgcggtgaagaagatagtagaaaac
agtctggatgctggtgccactaatattgatctaaagcttaaggactatggaatggatctc
attgaagtttcaggcaatggatgtggggtagaagaagaaaactttaaaggcttaactctg
aaacatcacacatctaagattcaagagtttgccgacctaactcgggttgaaacttttggc
tttcggggggaagctctgagctcactttgtgcactgagtgatgtcaccatttctacctgc
cacgtatcggcgaaggttgggactcgactggtgtttgatcacgatgggaaaatcatccag
aaaaccccctacccccaccccagagggaccacagtcagcgtgaagcagttattttctacg
ctacctgtgcgccataaggaatttcaaaggaatattaagaagccagttggtgagaagtac
atgcggtctgtggacacccaagcttgcagctgcatctga

>gi568815591f:74797652_75005671|GENSCAN_predicted_peptide_5|444_aa
MAQAQRLRQELQMLMTECLTWARNGSSKHPLSLAQKPEFLFHQLQSRDNAICPIAEQKAE
GKFSSRYRNHDSAENRRDGSMTRPRTDWTLKRACTEKRRPQHASSFEWRGHSLCWDREQR
DAETLKMLLDSGLSVQKKTKDRTETRFGEMGQILGKIMMSHQPQPQEEQSPQRSTSGYPL
QEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWVAETLCG
LKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKIPSEPTILGASPKTL
PPASRICIRPSNTPPPRNFHMSTVTPMLSYLANDMEEDDEAPKQNIFYFLYEETRSHIPL
LRELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEENTGPRGDVDF
QQELYSNANGRHQEGGEEPFVQII

>gi568815591f:74797652_75005671|GENSCAN_predicted_CDS_5|1335_bp
atggctcaggctcagaggctcaggcaagagctacagatgctcatgaccgaatgtctcacc
tgggcccggaatggcagcagcaagcaccctctcagcctagcccagaagccagagttccta
tttcatcagttgcaaagcagagacaatgccatctgcccgatagcagagcaaaaggcagag
gggaagttctcttcaaggtacagaaaccacgactccgcagagaaccgcagagatggcagc
atgaccagaccacggacagactggactctgaaacgggcatgtacagagaagaggagaccc
caacacgcttcaagctttgagtggagaggacacagcctctgctgggacagggaacagagg
gatgcggagaccctgaagatgcttttggacagtggtctgagtgtccagaagaagaccaag
gacagaacagagactaggtttggtgagatgggacagattttgggaaagatcatgatgagc
catcaaccgcagccccaggaagagcagagcccccagcggagcacctcagggtaccccctc
caggaggtggtggatgatgaagtgtcgggaccatcagcccctggggtagatcccagcccc
ccacgtaggtcccttggctggaaaaggaagagggaatgtttggatgaatctgatgatgag
ccagagaaggagctcgcccctgagcctgaggagacctgggtggcggagacgctgtgtggc
ctcaagatgaaggcgaagcgacggcgagtgtcgctcgtgctccctgagtactacgaggcc
ttcaacaggctgcttgaggatcctgtcattaaaagactcctggcctgggacaaagatctg
agggtgtcggacaagatcccatcggagcccaccatcctgggagcatcaccgaaaaccctt
cctccggcttctcggatttgcatccgaccttcgaatacccctccaccccgcaatttccac
atgagcacagtcaccccaatgctgagctatctggccaatgacatggaggaggacgatgag
gcccccaaacaaaacatcttctacttcctgtacgaggagacccgctctcatatacccttg
ctccgtgagctttggttccagttatgccgttacatgaacccgagggccaggaagaactgc
tctcagatagccttgttccggaagtatcggttccacttcttttgttccatgcgctgcagg
gcttgggtttccctggaggagttggaagagaacaccggacccaggggagatgtggatttt
cagcaggaactttattccaatgctaatggcagacatcaggaaggaggagaggaaccattt
gtgcagatcatctag

>gi568815591f:74797652_75005671|GENSCAN_predicted_peptide_6|269_aa
MVPASAASEDRRKLPIIVEDEGGPTRSRVLRVPALLHFPCTGLPVAPAAQPPRQQQQQQH
RGSPPPGGLQVPAGRARAAHAQRGPAFEWQVVCYSEHQLLPAPGAARRCSAARPLGCCSA
GAASLAPRLPLATWRASSLLSGPARPPPPPAPGAELPGLRAGCRCRQGAEGAGAAARPPA
DEPPRTGRGRTMELHILEHRLQVASVAKESIPLFTYGLIKLAFLSSKTRKQPVLSQAQKV
HWIGKNYTGKYAVSMGPWKLPAAFLGRIC

>gi568815591f:74797652_75005671|GENSCAN_predicted_CDS_6|810_bp
atggtgccagcatctgctgctagtgaggaccgcaggaagcttcctatcatagtggaagat
gaaggggggccgacaagatcacgtgtcctgagggtgcccgcgctcctgcatttcccgtgc
accgggctgccggtagctccggccgcccagcccccgcggcagcaacagcagcaacagcac
cgggggagcccccccccaggcggactacaagtcccggcaggccgcgcgcgggccgcgcat
gcgcagcggggaccggcgtttgagtggcaagttgtttgttacagcgaacaccagctgctc
cccgcgccgggcgccgcgcgccgctgctccgccgctcggcccctcggctgctgctccgcc
ggcgctgcctccctcgccccgcggctcccccttgcaacttggcgggcctcctcccttttg
tccggcccggcccggccgccgccgccccccgcgcccggcgccgagctcccgggtctccgg
gccggctgtcggtgccggcagggcgcggagggggcgggggccgcggctcgtccccccgcg
gatgagccgccgcggacggggcgcgggcggacgatggaactccacatcctggagcaccgg
ctgcaagttgccagcgtcgccaaggagagtatcccgctgttcacctacggcctgatcaaa
cttgccttcctgtcctccaagaccagaaagcagcctgtcctgtcccaggcccagaaagtc
cactggattggcaaaaactacacaggcaagtatgcagtaagcatgggcccatggaaactt
cctgctgccttcctgggccggatctgctga

>gi568815591f:74797652_75005671|GENSCAN_predicted_peptide_7|83_aa
MGDPRKPLTRHQGGFLEERMLKPTSRSVCVRFKDSQDFSGWTKGCCCYYCDDGEEEEEEE
EEEEEETGSHYVVQAGVQWCNLG

>gi568815591f:74797652_75005671|GENSCAN_predicted_CDS_7|252_bp
atgggtgatcccaggaagccactcaccaggcaccagggtggcttcctggaggagaggatg
ctgaagccgacctcaagaagtgtctgtgttaggtttaaggactcacaagacttctctggc
tggactaaaggttgttgttgttattattgtgatgatggtgaggaggaggaggaggaggag
gaggaggaggaggaggagacagggtctcattatgttgtccaggctggagtacagtggtgc
aatctcggctga