GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:33:14

Sequence gi568815591f:73077354_73205386 : 128033 bp : 47.52% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   1424   1181  244  1  1   80   90   268 0.924  23.70
 1.04 Intr -   3456   3326  131  0  2   53   17    89 0.767  -2.21
 1.03 Intr -   4501   4443   59  2  2   86  116    35 0.935   4.70
 1.02 Intr -   5753   5535  219  0  0   42   54   265 0.573  16.77
 1.01 Init -   6885   6756  130  0  1   63   94    83 0.232   6.72
 1.00 Prom -   7767   7728   40                              -5.16

 2.00 Prom +  13484  13523   40                              -7.56
 2.01 Init +  15975  16042   68  2  2   76   48    50 0.939   0.34
 2.02 Intr +  16304  16443  140  2  2   50  111   107 0.961   9.31
 2.03 Intr +  18329  18415   87  0  0   62   97   126 0.999  10.84
 2.04 Intr +  18592  18694  103  2  1   36   78    49 0.997  -2.07
 2.05 Intr +  20031  20214  184  0  1   81   87   156 0.938  14.59
 2.06 Term +  25216  25272   57  0  0   25   48    95 0.279  -3.11
 2.07 PlyA +  25509  25514    6                               1.05

 3.08 PlyA -  26693  26688    6                               1.05
 3.07 Term -  28133  28029  105  2  0  107   43    91 0.997   4.91
 3.06 Intr -  29457  29214  244  2  1   80   90   268 0.976  23.70
 3.05 Intr -  31490  31360  131  2  2   53   17    89 0.773  -2.21
 3.04 Intr -  32535  32477   59  1  2   86  116    35 0.935   4.70
 3.03 Intr -  33787  33569  219  2  0   42   54   265 0.577  16.77
 3.02 Intr -  34945  34770  176  0  2   42   94    97 0.291   5.28
 3.01 Init -  37020  36962   59  0  2   82   85    24 0.492   2.44
 3.00 Prom -  42260  42221   40                              -4.56

 4.04 PlyA -  42410  42405    6                              -0.45
 4.03 Term -  44418  44336   83  1  2   77   50    74 0.929   0.36
 4.02 Intr -  45879  45711  169  0  1   91   75   100 0.953   8.52
 4.01 Init -  46718  46710    9  2  0  100   62     3 0.463  -0.66
 4.00 Prom -  50913  50874   40                              -7.36

 5.00 Prom +  51041  51080   40                              -3.16
 5.01 Init +  71783  71790    8  1  2  104   91     0 0.265   2.40
 5.02 Intr +  77375  77795  421  2  1   75  -20   202 0.236   2.05
 5.03 Intr +  77806  77990  185  0  2   61  115   219 0.294  20.49
 5.04 Intr +  79943  79970   28  2  1  120   60    -1 0.465  -1.58
 5.05 Intr +  89662  89680   19  0  1   86  105    19 0.164  -0.42
 5.06 Intr +  98062  98172  111  2  0   65  123    71 0.801   8.65
 5.07 Intr +  99504  99569   66  1  0   60   80    76 0.778   2.88
 5.08 Intr + 105762 105945  184  1  1   36  116    73 0.043   3.75
 5.09 Intr + 107308 107366   59  1  2   76   97    -8 0.013  -2.57
 5.10 Intr + 112713 112784   72  1  0   84  111    42 0.761   5.48
 5.11 Intr + 114018 114201  184  1  1   88  106   155 0.812  16.15
 5.12 Intr + 115144 115202   59  1  2  116  116   -41 0.756   0.03
 5.13 Intr + 115598 115672   75  0  0   38  116    69 0.771   4.19
 5.14 Intr + 117273 117374  102  1  0  120  111    -6 0.967   5.05
 5.15 Intr + 118283 118348   66  0  0   62  103    97 0.952   7.48
 5.16 Intr + 118526 118709  184  0  1   81   78    94 0.769   6.55
 5.17 Intr + 120611 120666   56  2  2  102   81    29 0.974   2.22
 5.18 Intr + 121340 121420   81  0  0   74   80    39 0.705   1.31
 5.19 Intr + 122343 122426   84  1  0   42  111    52 0.865   2.69
 5.20 Intr + 123096 123279  184  1  1   94   97   167 0.979  17.05
 5.21 Intr + 123530 123584   55  2  1   59   79    44 0.122  -0.42
 5.22 Intr + 127158 127251   94  2  1   66   93    54 0.125   3.24

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  65963  66047   85  1  1   79   77    47 0.816   3.68
S.002 Term +  66866  66912   47  0  2  100   54    47 0.853  -0.13


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:73077354_73205386|GENSCAN_predicted_peptide_1|261_aa
MGQILGKIMMSHQPQPQEERSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKR
KRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPV
IKRLLAWDKDLRVSDKIPSEPTILGASPKTLPPASRICIRPSNTPPPRNFHMSTVTPTLS
YLANDMEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKY
RFHFFCSMRCRAWVSLEELEE

>gi568815591f:73077354_73205386|GENSCAN_predicted_CDS_1|783_bp
atgggacagattttgggaaagatcatgatgagccatcaaccgcagccccaggaagagcgg
agcccccagcggagcacctcagggtaccccctccaggaggtggtggatgatgaagtgtcg
ggaccatcagcccctggggtagatcccagccccccacgtaggtcccttggctggaaaagg
aagagggaatgtttggatgaatctgatgatgagccagagaaggagctcgcccctgagcct
gaggagacctgggtggcggagacgctgtgtggcctcaagatgaaggcgaagcgacggcga
gtgtcgctcgtgctccctgagtactacgaggccttcaacaggctgcttgaggatcctgtc
attaaaagactcctggcctgggacaaagatctgagggtgtcggacaagatcccatcggag
cccaccatcctgggagcatcaccaaaaacccttcctccggcttctcggatttgcatccga
ccttcgaatacccctccaccccgcaatttccacatgagcacagtcaccccaacactgagc
tatctggccaatgacatggaggaggacgacgaggcccccaaacaaaacatcttctacttc
ctgtacgaggagacccgctctcatatacccttgctcagtgagctttggttccagttatgc
cgttacatgaacccgagggccaggaagaactgctctcagatagccttgttccggaagtat
cggttccacttcttttgttccatgcgctgcagggcttgggtttccctggaggagttggaa
gag

>gi568815591f:73077354_73205386|GENSCAN_predicted_peptide_2|212_aa
MLSVFKKEDTIIAKDFGNLRDTITEPAKAIKPIDRKSVHQICSGPVVLSLSTAVKKIVGN
SLDAGATNIDLKLKDYGMDLIEVSGNGCGVEEENFEGLTLKHHTSKIQEFADLTRVETFG
FRGKALSSLCALSDVTISTCHVSAKVGTRLVFDHDGKIIQKTPYPHPRGTTVSVKQLFST
LPVRHKEFQRNIKKPVGEKYMRSVDTQACSCI

>gi568815591f:73077354_73205386|GENSCAN_predicted_CDS_2|639_bp
atgctttcagttttcaagaaagaagacaccattattgccaaagattttggtaatttgaga
gatacaattacagaacctgctaaggccatcaaacctattgatcggaagtcagtccatcag
atttgctctgggccggtggtactgagtctaagcactgcggtgaagaagatagtaggaaac
agtctggatgctggtgccactaatattgatctaaagcttaaggactatggaatggatctc
attgaagtttcaggcaatggatgtggggtagaagaagaaaacttcgaaggcttaactctg
aaacatcacacatctaagattcaagagtttgccgacctaactcgggttgaaacttttggc
tttcgggggaaagctctgagctcactttgtgcactgagtgatgtcaccatttctacctgc
cacgtatcggcgaaggttgggactcgactggtgtttgatcacgatgggaaaatcatccag
aaaaccccctacccccaccccagagggaccacagtcagcgtgaagcagttattttctacg
ctacctgtgcgccataaggaatttcaaaggaatattaagaagccagttggtgagaagtac
atgcggtctgtggacacccaagcttgcagctgcatctga

>gi568815591f:73077354_73205386|GENSCAN_predicted_peptide_3|330_aa
MDSATPHDPAAPLLVTVLESVQKKTKDRTETRFGEMGQILGKIMMSHQPQPQEERSPQRS
TSGYPLQEVVDDEVSGPSAPGVDPSPPRRSLGWKRKRECLDESDDEPEKELAPEPEETWV
AETLCGLKMKAKRRRVSLVLPEYYEAFNRLLEDPVIKRLLAWDKDLRVSDKIPSEPTILG
ASPKTLPPASRICIRPSNTPPPRNFHMSTVTPTLSYLANDMEEDDEAPKQNIFYFLYEET
RSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEENTGP
RGDVDFQQELYSNANGRHQEGGEEPFVQII

>gi568815591f:73077354_73205386|GENSCAN_predicted_CDS_3|993_bp
atggactcagccacaccccatgacccagcagctccgctcctggtgactgttctagagagt
gtccagaagaagaccaaggacagaacagagactaggtttggtgagatgggacagattttg
ggaaagatcatgatgagccatcaaccgcagccccaggaagagcggagcccccagcggagc
acctcagggtaccccctccaggaggtggtggatgatgaagtgtcgggaccatcagcccct
ggggtagatcccagccccccacgtaggtcccttggctggaaaaggaagagagaatgtttg
gatgaatctgatgatgagccagagaaggagctcgcccctgagcctgaggagacctgggtg
gcggagacgctgtgtggcctcaagatgaaggcgaagcgacggcgagtgtcgctcgtgctc
cctgagtactacgaggccttcaacaggctgcttgaggatcctgtcattaaaagactcctg
gcctgggacaaagatctgagggtgtcggacaagatcccatcggagcccaccatcctggga
gcatcaccaaaaacccttcctccggcttctcggatttgcatccgaccttcgaatacccct
ccaccccgcaatttccacatgagcacagtcaccccaacactgagctatctggccaatgac
atggaggaggacgacgaggcccccaaacaaaacatcttctacttcctgtacgaggagacc
cgctctcatatacccttgctcagtgagctttggttccagttatgccgttacatgaacccg
agggccaggaagaactgctctcagatagccttgttccggaagtatcggttccacttcttt
tgttccatgcgctgcagggcttgggtttccctggaggagttggaagagaacaccggaccc
aggggagatgtggattttcagcaggaactttattccaatgctaatggcagacatcaggaa
ggaggagaggaaccatttgtgcagatcatctag

>gi568815591f:73077354_73205386|GENSCAN_predicted_peptide_4|86_aa
MAQAQRLRQELQMLMTECLTWARNGSSKHPLSLAQKPEFLFHQLQSRDNAICPIAEQKAG
TANPVVQLLPQFPLVLQVPTVAVALL

>gi568815591f:73077354_73205386|GENSCAN_predicted_CDS_4|261_bp
atggctcaggctcagaggctcaggcaagagctacagatgctcatgaccgaatgtctcacc
tgggccaggaatggcagcagcaagcaccctctcagcctagcccagaagccagagttccta
tttcatcagttgcaaagcagagacaatgccatctgcccgatagcagagcaaaaggcaggt
accgccaaccctgtggtgcagctgctgccccagtttccccttgtgctccaggtccccact
gtggcagttgctcttctctga

>gi568815591f:73077354_73205386|GENSCAN_predicted_peptide_5|793_aa
MPSPEGARAPAFPVHRAAGSSGRPAPAAATAATAAAAAAPGEPPQADYKSRQAARGPRMR
SGDRRLSGKLFVTANTSCSPRAGRRAPLLRRSAPRLLLCRRCLPRPAAPPCNLAGLLPFV
RPGPAAAAPRARRRAPGSPGRLSGAEGAGAAARPPADEPPRTGRGRTMELHILEHRLQVA
SVAKESIPLFTYGLIKLAFLSSKTRKQPVLSQAQEATLVPDDDYSPPSKRPKANELPQPP
VPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAEALGSTEAKAVPYQKFEAHP
NDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTP
VKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFR
SPTWFGIPRLERIVHGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNS
KVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVEN
LFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKA
KIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERL
SKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPS
YLEISSMRRILDSAEFIKFTVIRVFLKHSYTRIIHGCFPVTYKAAVEQCGNQSLCFSLES
AEPSQLEVPATEX

>gi568815591f:73077354_73205386|GENSCAN_predicted_CDS_5|2379_bp
atgcccagtcctgagggtgcccgcgctcctgcatttcccgtgcaccgggctgccggtagc
tccggccgcccagcccccgcggcagcaacagcagcaacagcagcagcagcagcagcaccg
ggggagcccccccaggcggactacaagtcccggcaggccgcgcgcgggccgcgcatgcgc
agcggggaccggcgtttgagtggcaagttgtttgttacagcgaacaccagctgctccccc
cgcgccgggcgccgcgcgccgctgctccgccgctcggcccctcggctgctgctctgccgg
cgctgcctccctcgccccgcggctcccccttgcaacttggcgggcctcctcccttttgtc
cggcccggcccggccgccgccgccccccgcgcccggcgccgagctcccgggtctccgggc
cggctgtcgggcgcggagggggcgggggccgcggctcgtccccccgcggatgagccgccg
cggacggggcgcgggcggacgatggaactccacatcctggagcaccggctgcaagttgcc
agcgtcgccaaggagagtatcccgctgttcacctacggcctgatcaaacttgccttcctg
tcctccaagaccagaaagcagcctgtcctgtcccaggcccaggaagccaccctggtgcct
gatgatgattattctccaccgtctaagagaccaaaggccaatgagctaccgcagccacca
gtcccggaacccgccaatgctgggaagcggaaagtgagggagttcaacttcgagaaatgg
aatgctcgcatcactgatctacgtaaacaagttgaagaattgtttgaaaggaaatatgcg
gaagccttggggagcactgaagccaaggctgtaccgtaccaaaaatttgaggcacacccg
aatgatctgtacgtggaaggactgccagaaaacattcctttccgaagtccctcatggtat
ggaatcccaaggctggaaaaaatcattcaagtgggcaatcgaattaaatttgttattaaa
agaccagaacttctgactcacagtaccactgaagttactcagccaagaacgaatacacca
gtcaaagaagattggaatgtcagaattaccaagctacggaagcaagtggaagagattttt
aatttgaaatttgctcaagctcttggactcaccgaggcagtaaaagtaccatatcctgtg
tttgaatcaaacccggagttcttgtatgtggaaggcttgccagaggggattcccttccga
agccctacctggtttggaattccacgacttgaaaggatcgtccacgggagtaataaaatc
aagttcgttgttaaaaaacctgaactagttatttcctacttgcctcctgggatggctagt
aaaataaacactaaagctttgcagtcccccaaaagaccacgaagtcctgggagtaattca
aaggttcctgaaattgaggtcaccgtggaaggccctaataacaacaatcctcaaacctca
gctgttcgaaccccgacccagactaacggttctaacgttcccttcaagccacgagggaga
gagttttcctttgaggcctggaatgccaaaatcacggacctaaaacagaaagttgaaaat
ctcttcaatgagaaatgtggggaagctcttggccttaaacaagctgtgaaggtgccgttc
gcgttatttgagtctttcccggaagacttttatgtggaaggcttacctgagggtgtgcca
ttccgaagaccatcgacttttggcattccgaggctggagaagatactcagaaacaaagcc
aaaattaagttcatcattaaaaagcccgaaatgtttgagacggcgattaaggagagcacc
tcctctaagagccctcccagaaaaataaattcatcacccaatgttaatactactgcatca
ggtgttgaagaccttaacatcattcaggtgacaattccagatgatgataatgaaagactc
tcgaaagttgaaaaagctagacagctaagagaacaagtgaatgacctctttagtcggaaa
tttggtgaagctattggtatgggttttcctgtgaaagttccctacaggaaaatcacaatt
aaccctggctgtgtggtggttgatggcatgcccccgggggtgtccttcaaagcccccagc
tacctggaaatcagctccatgagaaggatcttagactctgccgagtttatcaaattcacg
gtcattagagtcttcctgaaacacagctacacccgtattatccatggctgctttcctgtc
acatataaagcagctgttgaacaatgtggaaatcagtctctgtgtttctctttagaatca
gctgaaccaagccagttggaagttccagccacagaagnn