GENSCAN 1.0	Date run:  3-Nov-116	Time: 19:53:53

Sequence gi568815587r:63452967_63660194 : 207228 bp : 44.22% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   1952   1947    6                               1.05
 1.04 Term -  10629  10537   93  0  0   95   49    71 0.732   1.73
 1.03 Intr -  13406  13144  263  0  2  114   64   352 0.849  32.61
 1.02 Intr -  15499  15391  109  1  1   95   71   128 0.999  11.66
 1.01 Init -  21473  21465    9  2  0   57  106     0 0.306  -0.82
 1.00 Prom -  24515  24476   40                              -6.06

 2.00 Prom +  27518  27557   40                              -4.66
 2.01 Init +  28742  28874  133  1  1   78   47    67 0.500   1.90
 2.02 Term +  31596  31936  341  1  2   27   36   303 0.568  13.70
 2.03 PlyA +  32501  32506    6                               1.05

 3.03 PlyA -  34100  34095    6                               1.05
 3.02 Term -  35300  35290   11  0  2   94   40    10 0.050  -4.84
 3.01 Init -  38068  37921  148  1  1   85   76   120 0.893  10.94
 3.00 Prom -  44465  44426   40                              -3.56

 4.00 Prom +  49048  49087   40                              -2.86
 4.01 Init +  53493  53561   69  2  0   44  117    61 0.926   5.65
 4.02 Intr +  55587  55675   89  2  2   72  110    91 0.995   8.47
 4.03 Intr +  55812  56025  214  0  1   24   67   241 0.952  14.32
 4.04 Intr +  56812  56931  120  0  0  113  101   175 0.999  21.99
 4.05 Intr +  57497  57535   39  1  0   93   84    40 0.514   2.52
 4.06 Intr +  58113  58139   27  2  0  102  105    10 0.502   2.41
 4.07 Term +  63281  63427  147  1  0  104   55   197 0.813  15.90
 4.08 PlyA +  63784  63789    6                               1.05

 5.00 Prom +  65373  65412   40                              -6.16
 5.01 Init +  72744  73029  286  2  1   86   22   173 0.373   7.75
 5.02 Term +  75974  75987   14  0  2  148   42    11 0.346   0.86
 5.03 PlyA +  76400  76405    6                               1.05

 6.00 Prom +  82205  82244   40                              -4.66
 6.01 Init +  83903  83911    9  1  0   78  123     5 0.570   3.29
 6.02 Intr +  86550  86658  109  2  1   89   80   119 0.994  11.06
 6.03 Intr +  91634  91923  290  0  2   80  110   270 0.615  25.36
 6.04 Term +  93183  93290  108  2  0   88   48    20 0.322  -3.49
 6.05 PlyA +  93469  93474    6                               1.05

 7.06 PlyA -  95600  95595    6                               1.05
 7.05 Term - 100099  99998  102  1  0  130   35   107 0.963   7.88
 7.04 Intr - 105694 105426  269  2  2   75   57   329 0.992  25.75
 7.03 Intr - 107227 107119  109  1  1  131   80   107 0.911  14.06
 7.02 Intr - 109721 109650   72  2  0   74  119    50 0.987   6.30
 7.01 Init - 110358 110350    9  0  0   84  111    11 0.744   2.87
 7.00 Prom - 120217 120178   40                              -3.06

 8.05 PlyA - 120354 120349    6                               1.05
 8.04 Term - 122080 121979  102  1  0  140   36    84 0.897   6.68
 8.03 Intr - 137402 137134  269  0  2   73   96   468 0.705  43.35
 8.02 Intr - 145197 145095  103  0  1  102   71    65 0.754   5.95
 8.01 Init - 154323 154255   69  0  0   78   75   104 0.536   7.16
 8.00 Prom - 164149 164110   40                              -1.56

 9.11 PlyA - 164626 164621    6                               1.05
 9.10 Term - 169701 169633   69  0  0  109   35    22 0.158  -3.06
 9.09 Intr - 178505 178074  432  2  0  117  111   391 0.704  38.14
 9.08 Intr - 180131 180060   72  2  0   60   94    57 0.890   3.10
 9.07 Intr - 183368 183241  128  0  2   79   94    33 0.925   3.40
 9.06 Intr - 190529 190391  139  2  1   81   93    96 0.992   9.44
 9.05 Intr - 191295 191203   93  0  0   80  111    17 0.879   3.36
 9.04 Intr - 199020 198970   51  0  0   67   76    43 0.494   0.10
 9.03 Intr - 199609 199505  105  1  0  109   98    54 0.991   8.91
 9.02 Intr - 205938 205795  144  0  0   51  116    33 0.857   2.88
 9.01 Init - 206278 206072  207  1  0   85  110   210 0.517  21.72

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_1|157_aa
MNWGKPRPRPGDLIEIFRIGYEHWAIYVEDDCVVHLAPPSEEFEVGSITSIFSNRAVVKY
SRLEDVLHGCSWKVNNKLDGTYLPLPVDKIIQRTKKMVNKIVQYSLIEGNCEHFVNGLRY
GVPRSQQVEHALMEGAKAAGAVISAVVDSIKPKPITA

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_1|474_bp
atgaattggggaaaaccaagacccagacctggagacctgattgagatttttcgaattggc
tatgagcactgggccatctatgtagaagatgattgcgtggtccatctggctcccccaagt
gaggagtttgaggtgggcagcattacttccatctttagcaatcgggccgtggtgaaatac
agtcgtctggaggatgtgctgcatggctgctcctggaaggtcaataacaagctagatggg
acgtacctgcccttgccggtggacaagatcatccagcgtacaaaaaagatggtcaacaag
atcgtgcagtacagcctgattgaagggaactgtgagcactttgtcaatggcctcagatat
ggcgtaccccggagccagcaggtagagcacgccctgatggaaggagcgaaggctgctgga
gcagttatttcagctgtagtggatagcataaagcccaaaccaataactgcctga

>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_2|157_aa
MEYYAAIKNDEFMSFVGTWMKLETIILSKLSQGQKTKHRMFSLIDTEIAFDKIQHPFMIK
NLNKISIKGTNLKAIKAIYDKPTANIIVIGEKLKAFPQITGKRRGCPLSPHLFDIVLEVL
ARAIRQEKEIKGIQISKKEVKLLLFADMIIDLENPKA

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_2|474_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcatagacacagaaatagcatttgacaagatccagcatccctttatgattaaa
aacctcaacaaaatcagcataaaagggacaaacctcaaggcaataaaagccatctacgac
aaacccacagccaacattatagtgattggggaaaagttgaaagcattcccccagataact
ggaaaaagacgaggatgcccactttcaccacatttattcgacatagtgctagaagtccta
gccagagcaatcagacaagagaaagaaataaagggcatccaaatcagtaaaaaggaagtc
aaactgttgctgtttgctgatatgatcatagacctggaaaaccctaaagcctaa

>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_3|52_aa
MGLSPGAEGEYALRLPRIPPPLPKPASRTASTGPKDQPPALRRSAVPHSGNN

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_3|159_bp
atgggcctgagcccgggcgccgagggggagtacgcgctccgcctccctaggattccccca
cccctccccaaacccgcctcgcgaaccgccagtaccgggcccaaggaccagccgcctgcg
ctcagacgttcagctgtgccccactcaggcaacaactga

>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_4|234_aa
MSPGEKLDPIPDSFILQPPVFHPVVPYVTTIFGGLHAGKMVMLQGVVPLDAHRFQVDFQC
GCSLCPRPDIAFHFNPRFHTTKPHVICNTLHGGRWQREARWPHLALRRGSSFLILFLFGN
EEVKVSVNGQHFLHFRYRLPLSHVDTLGIFGDILVEAVGFLNINPFVEGSREYPAGHPFL
LMSPRLVLLLFQEGGLKLALNGQGLGATSMNQQALEQLRELRISGSVQLYCVHS

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_4|705_bp
atgtcacctggagaaaaactggacccaattcctgacagcttcattctgcaaccaccagtc
ttccacccggtggttccttatgtcacgacgatttttggaggcctgcatgcaggcaagatg
gtcatgctgcaaggagtggtccctctagatgcacacaggtttcaggtggacttccagtgt
ggctgcagcctgtgtccccggccagatatcgccttccacttcaaccctcgcttccatacc
accaagccccatgtcatctgcaacaccctgcatggtggacgctggcaaagggaggcccgg
tggccccacctggccctgcgaagaggctccagcttcctcatcctctttctcttcgggaat
gaggaagtgaaggtgagtgtgaatggacagcactttctccacttccgctaccggctccca
ctgtctcatgtggacacgctgggtatatttggtgacatcctggtagaggctgttggattc
ctgaacatcaatccatttgtggagggcagcagagagtacccagctggacatcctttcctg
ctgatgagccccaggctggtgctgctcctgttccaggagggagggctgaagctggcgctc
aatgggcaggggctgggggccaccagcatgaaccagcaggccctggagcagctgcgggag
ctccggatcagtggaagtgtccagctctactgtgtccactcctga

>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_5|99_aa
MAIRPKVIYRFNAIPIMLPMTFFTELEKTTLKFIRNQKGAHIAKSILSQKNKAGGIMLPD
FKLYYKTTVTKTAWYWYQNRDIDQWNRTEPSEIMPRKCK

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_5|300_bp
atggccatacggcccaaggtaatttatagattcaatgccatccccatcatgctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatacggaaccaaaaaggagcc
cacatcgccaagtcaatcctaagccaaaagaacaaagccggaggcatcatgctacctgac
ttcaaactatactacaagactacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataatgccacgtaagtgtaagtaa

>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_6|171_aa
MASPHQEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPPMRVPLIAGEYPGAGSSSVFSV
LSNSAEVKRERLEDVVGGCCYRVNNSLDHEYQPRPVEVIISSAKEMVGQKMKYSIVSRNC
EHFVTQLRYGKSRCKQVEKAKVEVGVATALGILVVAGCSFAIRRYQKKATA

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_6|516_bp
atggcttcgccacaccaagagcccaaacctggagacctgattgagattttccgccttggc
tatgagcactgggccctgtatataggagatggctacgtgatccatctggctcctccaatg
agagtgcctctgattgcaggtgagtaccccggggctggctcctccagtgtcttctcagtc
ctgagcaacagtgcagaggtgaaacgggagcgcctggaagatgtggtgggaggctgttgc
tatcgggtcaacaacagcttggaccatgagtaccaaccacggcccgtggaggtgatcatc
agttctgcgaaggagatggttggtcagaagatgaagtacagtattgtgagcaggaactgt
gagcactttgtcacccagctgagatatggcaagtcccgctgtaaacaggtggaaaaggcc
aaggttgaagtcggtgtggccacggcgcttggaatcctggttgttgctggatgctctttt
gcgattaggagataccaaaaaaaagcgacagcctga

>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_7|186_aa
MALVVNKQSYEVGIITANFMDRRNDILARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHL
APASEIAGAGAASVLSALTNKAIVKKELLSVVAGGDNYRVNNKHDDRYTPLPSNKIVKRA
EELVGQELPYSLTSDNCEHFVNHLRYGVSRSDQVTGAVTTVGVAAGLLAAASLVGILLAR
SKRERQ

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_7|561_bp
atggctttggtagttaataagcaatcctatgaagtaggcataattactgccaacttcatg
gataggaggaatgatatactggccagaccaagaccgagacttggagacctgattgagatt
tctcgctttggctatgcacactgggccatctacgtgggagatggctatgtggtccatctg
gctccggcaagtgaaattgctggagctggtgcggccagtgtcctgtctgccctgaccaac
aaagccatagtgaagaaggaactgctgtctgtggtggctgggggagacaactacagggtc
aataacaagcacgatgacagatacacaccactgccttccaacaaaatcgtcaagcgggca
gaggagttggtggggcaggagttgccttattcgctgaccagtgacaactgcgagcacttc
gtgaaccatctgcgctatggcgtctcccgcagtgaccaggtcactggtgcagtcacgaca
gtaggtgtggcagcaggcctgctggctgccgcaagccttgtggggatcctgctggccaga
agcaagcgggaaaggcaataa

>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_8|180_aa
MTPSSILMCALCPRLSLGYPLPSPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLAPPSEV
AGAGAASVMSALTDKAIVKKELLYDVAGSDKYQVNNKHDDKYSPLPCSKIIQRAEELVGQ
EVLYKLTSENCEHFVNELRYGVARSDQVRDVIIAASVAGMGLAAMSLIGVMFSRNKRQKQ

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_8|543_bp
atgacccctagctccatactgatgtgtgcgctgtgtccccgcctctcgttgggatacccg
ctgcccagcccagagcctaagcctggagacctgattgagatttttcgccctttctacaga
cactgggccatctatgttggcgatggatatgtggttcatctggcccctccaagtgaggtc
gcaggagctggtgcagccagtgtcatgtccgccctgactgacaaggccatcgtgaagaag
gaattgctgtatgatgtggccgggagtgacaagtaccaggtcaacaacaaacatgatgac
aagtactcgccgctgccctgcagcaaaatcatccagcgggcggaggagctggtggggcag
gaggtgctctacaagctgaccagtgagaactgcgagcactttgtgaatgagctgcgctat
ggagtcgcccgcagtgaccaggtcagagatgtcatcatcgctgcaagcgttgcaggaatg
ggcttggcagccatgagccttattggagtcatgttctcaagaaacaagcgacaaaagcaa
taa

>gi568815587r:63452967_63660194|GENSCAN_predicted_peptide_9|479_aa
MESSKPGPVQVVLVQKDQHSFELDEKALASILLQDHIRDLDVVVVSVAGAFRKGKSFILD
FMLRYLYSQKESGHSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPGGKKVAV
VLMDTQGAFDSQSTVKDCATIFALSTMTSSVQIYNLSQNIQEDDLQQLQTLMFLVRDWSF
PYEYSYGLQGGMAFLDKRLQVKEHQHEEIQNVRNHIHSCFSDVTCFLLPHPGLQVATSPD
FDGKLKDIAGEFKEQLQALIPYVLNPSKLMEKEINGSKVTCRGLLEYFKATAEANNLAAA
ASAKDIYYNNMEEVCGGEKPYLSPDILEEKHCEFKQLALDHFKKTKKMGGKDFSFRYQQE
LEEEIKELYENFCKHNGSKNVFSTFRTPAVLFTGIVALYIASGLTGFIGLEVVAQLFNCM
VGLLLIALLTWGYIRYSGQYRELGGAIDFGAAYVLEQIGFLHAPGEDRHQWFQVYVIPL

>gi568815587r:63452967_63660194|GENSCAN_predicted_CDS_9|1440_bp
atggagagcagcaagcctggtccagtgcaggttgttttggttcagaaagatcaacattcc
tttgagctagatgagaaagccttggccagcatcctcttgcaggaccacatccgagatctt
gatgtggtggtggtttcagtggctggtgccttccgaaagggcaagtccttcattctggat
tttatgctacgatacttatattctcagaaggaaagtggccattcaaattggttgggtgac
ccagaagaaccgttaacaggattttcctggagagggggatctgatccagaaaccactggg
attcaaatctggagtgaagttttcactgtggagaagccaggtgggaagaaggttgcagtt
gttctgatggatacccagggggcatttgacagccagtcaactgtgaaagactgtgctacc
atctttgctctaagcactatgactagttctgttcagatttataatttatctcagaacatt
caagaagatgatcttcaacagctgcagacactgatgtttttggttagagattggagtttc
ccttatgaatatagctatggactccaaggaggaatggcatttttggataagcgtttacag
gtgaaggaacatcaacatgaagaaattcagaatgttcgaaatcacattcactcatgtttc
tccgatgtcacctgctttctcttaccacatccaggactccaggtggccacaagccctgac
tttgatgggaaattaaaagatattgctggtgaattcaaagagcagttacaggcactgata
ccgtatgtattaaacccatctaagttaatggaaaaggagatcaatggctcaaaggtcacc
tgtcggggactactggagtattttaaggccactgctgaagccaacaacttagcagctgca
gcctctgccaaggacatttattataacaacatggaagaggtttgtgggggagagaaacct
tatttgtctccagacattctagaggagaagcactgtgaattcaaacaacttgctctggac
cattttaagaagaccaagaagatgggtgggaaggatttcagctttcgttaccagcaggag
ctggaggaggaaatcaaggaattatatgagaacttctgcaagcacaatggtagcaagaac
gtcttcagcaccttccgaacccctgcagtgctgttcacgggcattgtagctttgtacata
gcctcaggcctcactggcttcataggtcttgaggttgtagcccagttgttcaactgtatg
gttggactactgttaatagcactcctcacctggggctacatcaggtattctggtcaatat
cgtgagctgggcggagctattgattttggtgccgcatatgtgttggagcagataggtttc
ctccatgccccaggggaggacaggcaccagtggttccaggtttatgtcatcccactttaa