GENSCAN 1.0	Date run:  3-Nov-116	Time: 22:20:45

Sequence gi568815593f:175392104_175626731 : 234628 bp : 43.47% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   6573   6902  330  2  0   88   44   245 0.933  16.12
 1.02 PlyA +   6986   6991    6                               1.05

 2.00 Prom +   7986   8025   40                              -4.96
 2.01 Init +   8079   9116 1038  2  0   44   41   360 0.744  20.90
 2.02 Term +   9406  10686 1281  0  0  -10   50   434 0.911  21.40
 2.03 PlyA +  11683  11688    6                               1.05

 3.00 Prom +  18633  18672   40                              -2.66
 3.01 Init +  42066  42140   75  2  0   74   76    41 0.350   2.59
 3.02 Term +  46350  46418   69  2  0   94   35    70 0.503   0.24
 3.03 PlyA +  47980  47985    6                               1.05

 4.05 PlyA -  48709  48704    6                               1.05
 4.04 Term -  51000  49656 1345  2  1   59   43  1123 0.097  95.88
 4.03 Intr -  52920  52614  307  1  1  110   64   128 0.087   8.11
 4.02 Intr -  61126  61103   24  2  0  135   87    13 0.090   3.90
 4.01 Init -  86788  86254  535  1  1   55   30   268 0.122  10.72
 4.00 Prom -  89531  89492   40                              -5.66

 5.00 Prom +  89962  90001   40                              -3.06
 5.01 Init +  92349  92455  107  2  2   67   17   139 0.250   2.46
 5.02 Intr +  93400  93499  100  1  1  123   56    35 0.238   3.91
 5.03 Intr +  99992 100164  173  1  2   76   92   106 0.219   8.54
 5.04 Intr + 116929 117099  171  1  0   66   91    92 0.553   6.36
 5.05 Intr + 118006 118104   99  1  0   51   80   118 0.987   6.53
 5.06 Intr + 119348 119423   76  2  1  107   73    45 0.756   4.42
 5.07 Intr + 120008 120093   86  1  2   89  116   -43 0.755  -2.78
 5.08 Intr + 121360 121487  128  1  2   99   28   182 0.648  13.62
 5.09 Intr + 130740 130921  182  1  2   71   84    33 0.276   0.79
 5.10 Term + 131138 131239  102  1  0   67   37    83 0.422  -0.62
 5.11 PlyA + 131554 131559    6                               1.05

 6.09 PlyA - 131578 131573    6                               1.05
 6.08 Term - 134293 134199   95  2  2   52   48    77 0.541  -1.91
 6.07 Intr - 139220 139104  117  0  0   57   81   120 0.035   8.64
 6.06 Intr - 150241 150175   67  1  1   92   79    45 0.030   2.48
 6.05 Intr - 171296 171156  141  2  0   70   84    60 0.116   4.35
 6.04 Intr - 200002 199942   61  0  1   60   66    51 0.022  -1.16
 6.03 Intr - 204556 204308  249  0  0   78   52   117 0.036   3.65
 6.02 Intr - 205128 205005  124  1  1   70   55   106 0.833   5.14
 6.01 Init - 214248 214161   88  0  1   73   57    53 0.170   1.50
 6.00 Prom - 216765 216726   40                              -5.76

 7.00 Prom + 221225 221264   40                              -4.96
 7.01 Sngl + 228419 228808  390  1  0   66   33   522 0.416  38.72
 7.02 PlyA + 229095 229100    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  50996  49656 1341  2  0   73   43  1131 0.849 103.24
S.002 Term - 178674 178647   28  2  1  118   40    44 0.803   0.15
S.003 Init - 180178 180120   59  1  2   93   85    90 0.894   7.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:175392104_175626731|GENSCAN_predicted_peptide_1|109_aa
MGKIQNRKTGNSKKQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELQEDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRS

>gi568815593f:175392104_175626731|GENSCAN_predicted_CDS_1|330_bp
atggggaaaatacagaacagaaaaactggaaactctaaaaagcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagctggatggagaatgactttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacaggaggacattcaa
accaaagggaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagctga

>gi568815593f:175392104_175626731|GENSCAN_predicted_peptide_2|772_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSVLHQADLIDIYRTLHPKSTECTFFSAPHHTYS
KIDHIVGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQNHSTTWKLNNLLLNDYWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEKQEQTHSKASRRQEITKIRPELKEIETQKTLQKINESRSWFFERINKIDRPLARLIK
KKREKNQIDAIKNDKGDITTNPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLN
QEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQKYKEELHINGAKDKNHMIIS
IDAEKAFDKIQQRFMLKTLNKLGIDGTYFKIIRAIYDKPTANIILNGQKLEAFPLKTGTR
QGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNL
LKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVK
DLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPMPFFT
ELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQ
WNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAIGRKLKLDPFLTPYTK
INSRWIKDLNIRPKTIKTLEENLGITIQDIGMGKDFVSKTPKAMATKDKIDK

>gi568815593f:175392104_175626731|GENSCAN_predicted_CDS_2|2319_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagttctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagagtgtacatttttttcagcaccacaccacacctattcc
aaaattgaccacatagttggaagtaaagcactcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctctcagaccatagtgcaatcaaactagaactcaggattaagaatctc
acgcaaaaccactcaactacatggaaactgaacaacttgctcctgaatgactactgggta
cataatgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacgcattcaaggcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagaccagaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatcc
aggagctggttttttgaaaggatcaacaaaattgatagaccgctagcaagactaataaag
aaaaaaagagagaagaatcaaatagatgcaataaaaaatgataaaggggatatcaccacc
aatcccacagaaatacaaactaccatcagagaatactacaaacacctctatgcaaataaa
ctagaaaatctagaagaaatggataaattcctcgacacatacactctcccaagactaaac
caggaagaagttgaatctctgaatagaccaataacaggatctgaaattgtggcaataatc
aatagcttaccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccag
aagtacaaggaggaactgcatataaacggagccaaagacaaaaaccacatgattatctca
atagatgcagaaaaagcctttgacaaaattcaacaacgcttcatgctaaaaactctcaat
aaattaggtattgatgggacatatttcaaaataataagagctatctatgacaaacccaca
gccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaactggcacaaga
cagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggca
attaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtcc
ctgtttgcagacgacatgattgtatatctagaaaaccccattgtctcagcccaaaatctc
cttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatca
caagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactccca
ttcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggatacaaacaaa
tggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaaatggccatactg
cccaaggtaatttacagattcaatgccatccccatcaagctaccaatgcctttcttcaca
gaattggaaaaaactactttaaaattcatatggaaccaaaaaagagcccgtatcgccaag
tcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatac
tacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaa
tggaacagaacagagccctcagaaataatgccacatatctacaactatctgatctttgac
aaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaa
aactggctagccataggtagaaagctgaaactggatcccttccttacaccttatacaaaa
atcaattcaagatggattaaagacttaaacattagacctaaaaccataaaaaccctagaa
gaaaacctaggcattaccattcaggacataggcatgggcaaggacttcgtgtctaaaaca
ccaaaagcaatggcaacaaaagacaaaattgacaaatga

>gi568815593f:175392104_175626731|GENSCAN_predicted_peptide_3|47_aa
MEKPNLAERISPYKLSRVNATTKIKALNCGLALGERVAEMLLVQAWR

>gi568815593f:175392104_175626731|GENSCAN_predicted_CDS_3|144_bp
atggagaaacctaatttagcagaaaggatcagcccttataaactcagcagagtcaatgcc
acaacaaaaattaaggccctcaactgtgggctggctctgggggaaagagtggctgaaatg
ctgctggtgcaggcctggagataa

>gi568815593f:175392104_175626731|GENSCAN_predicted_peptide_4|736_aa
MLGLGMLEAWCCPAAGCQGSPGAGTPPPARGIPGPQRGFRPPSPGSPRSRPAGARPEPAQ
ACAPPPGPLRVSPPTWLGLPPATHRFPRAAARAARRSRSVQPPPPPETLLPPRRPRASPE
RVLARACERASGPGSYEAQGPALRVQARVQAPPRARDSASGLATAPRVQEELQAHPHGAD
QIELSDWCFKRRSPEWRRFRFPVFRFWQSWTGKSESGRGSLAVAGTLVSEVGAREGTAGA
REVAAAGRGRPGHTERAALGLGRSGGAGHRLESGVDRSRDAPATWAGKEKMRTLNTSAMD
GTGLVVERDFSVRILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSD
LLVAVLVMPWKAVAEIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFR
YERKMTPKAAFILISVAWTLSVLISFIPVQLSWHKAKPTSPSDGNATSLAETIDNCDSSL
SRTYAISSSVISFYIPVAIMIVTYTRIYRIAQKQIRRIAALERAAVHAKNCQTTTGNGKP
VECSQPESSFKMSFKRETKVLKTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDS
NTFDVFVWFGWANSSLNPIIYAFNADFRKAFSTLLGCYRLCPATNNAIETVSINNNGAAM
FSSHHEPRGSISKECNLVYLIPHAVGSSEDLKKEEAAGIARPLEKLSPALSVILDYDTDV
SLEKIQPITQNGQHPT

>gi568815593f:175392104_175626731|GENSCAN_predicted_CDS_4|2211_bp
atgctgggcctcgggatgctggaagcgtggtgttgtccggccgcaggatgccagggatcc
ccaggtgcagggaccccccccccggcccgaggcatccccggcccgcaaaggggcttccga
cctccgagcccggggtctccccgcagccggcccgcgggtgcacggcccgagcctgcccaa
gcctgcgcgcctccgccgggccccctgcgcgtttccccacccacctggctgggcctgccg
cccgcgactcaccgcttcccccgggctgccgcccgcgctgctcgcaggtcccgctcagtg
cagcctccgccgccaccggaaacgcttctcccgccacggcgtcctcgcgcgtccccggag
cgcgtcctcgcgcgcgcctgtgagcgcgcgtccgggcccgggagctacgaggcccaggga
cccgccctccgggtccaggcccgggtccaggccccgccccgcgcccgcgactccgcttct
ggcttagcgaccgcgccccgggtccaagaggaactccaagcccatcctcacggtgctgat
cagatagagctctctgattggtgtttcaagcggaggagtcctgagtggagaagattccgc
ttccctgttttcaggttctggcagtcatggaccgggaagagcgagtcggggcgcgggtcc
ctggcggtcgctggaacccttgtgagtgaggttggtgcccgcgagggcacagcgggcgct
cgggaagtcgcagccgccggcagagggcgccccgggcacacggagcgcgcggcgctgggg
ttggggcgctcgggaggtgcggggcaccggctggagtccggcgttgaccgcagccgggac
gcgcccgccacctgggcggggaaggagaagatgaggactctgaacacctctgccatggac
gggactgggctggtggtggagagggacttctctgttcgtatcctcactgcctgtttcctg
tcgctgctcatcctgtccacgctcctggggaacacgctggtctgtgctgccgttatcagg
ttccgacacctgcggtccaaggtgaccaacttctttgtcatctccttggctgtgtcagat
ctcttggtggccgtcctggtcatgccctggaaggcagtggctgagattgctggcttctgg
ccctttgggtccttctgtaacatctgggtggcctttgacatcatgtgctccactgcatcc
atcctcaacctctgtgtgatcagcgtggacaggtattgggctatctccagccctttccgg
tatgagagaaagatgacccccaaggcagccttcatcctgatcagtgtggcatggaccttg
tctgtactcatctccttcatcccagtgcagctcagctggcacaaggcaaaacccacaagc
ccctctgatggaaatgccacttccctggctgagaccatagacaactgtgactccagcctc
agcaggacatatgccatctcatcctctgtaataagcttttacatccctgtggccatcatg
attgtcacctacaccaggatctacaggattgctcagaaacaaatacggcgcattgcggcc
ttggagagggcagcagtccacgccaagaattgccagaccaccacaggtaatggaaagcct
gtcgaatgttctcaaccggaaagttcttttaagatgtccttcaaaagagaaactaaagtc
ctgaagactctgtcggtgatcatgggtgtgtttgtgtgctgttggctacctttcttcatc
ttgaactgcattttgcccttctgtgggtctggggagacgcagcccttctgcattgattcc
aacacctttgacgtgtttgtgtggtttgggtgggctaattcatccttgaaccccatcatt
tatgcctttaatgctgattttcggaaggcattttcaaccctcttaggatgctacagactt
tgccctgcgacgaataatgccatagagacggtgagtatcaataacaatggggccgcgatg
ttttccagccatcatgagccacgaggctccatctccaaggagtgcaatctggtttacctg
atcccacatgctgtgggctcctctgaggacctgaaaaaggaggaggcagctggcatcgcc
agacccttggagaagctgtccccagccctatcagtcatattggactatgacactgacgtc
tctctggagaagatccaacccatcacacaaaacggtcagcacccaacctga

>gi568815593f:175392104_175626731|GENSCAN_predicted_peptide_5|407_aa
MPSAHLCLARGQQVHAGMLRTNQVARPALTPAGGKGEPCDDIGPTKYSRIMPASLKILNL
IISAKSLHHSGTMSGELPPNINIKEPRWDQSTFIGRANHFFTVTDPRNILLTNEQLESAR
KIVHDYRQGIVPPGLTENELWRAKYIYDSAFHPDTGEKMILIGRMSAQVPMNMTITGCMM
TFYRTTPAVLFWQWINQSFNAVVNYTNRSGDAPLTVNELGTAYVSATTGAVATALGLNAL
TKHVSPLIGRFVPFAAVAAANCINIPLMRQRELKVGIPVTDENGNRLGESANAAKQAITQ
VVVSRILMAAPGMVFCLKSFLVHASHRKLPLNPAFDVRTGLTGVKSAFSTSGLQPALDLT
PTHKAAAFCCLSFSKFKPHGQEPFITLEPTEEPPLKRAGPSELALGA

>gi568815593f:175392104_175626731|GENSCAN_predicted_CDS_5|1224_bp
atgccctcagcgcatctctgccttgcccggggccagcaggtgcacgccggaatgctgcgg
accaaccaagtggcccggccagccctgacccctgcgggtggaaaaggggagccttgtgat
gacattgggccaaccaaatattccaggatcatgcctgcatctctcaagatccttaactta
atcatatcagcaaagtccctgcaccattccgggaccatgtctggagaactaccaccaaac
attaacatcaaggaacctcgatgggatcaaagcactttcattggacgagccaatcatttc
ttcactgtaactgaccccaggaacattctgttaaccaacgaacaactcgagagtgcgaga
aaaatagtacatgattacaggcaaggaattgttcctcctggtcttacagaaaatgaattg
tggagagcaaagtacatctatgattcagcttttcatcctgacactggtgagaagatgatt
ttgataggaagaatgtcagcccaggttcccatgaacatgaccatcacaggttgtatgatg
acgttttacaggactacgccggctgtgctgttctggcagtggattaaccagtccttcaat
gccgtcgtcaattacaccaacagaagtggagacgcacccctcactgtcaatgagttggga
acagcttacgtttctgcaacaactggtgccgtagcaacagctctaggactcaatgcattg
accaagcatgtctcaccactgataggacgttttgttccctttgctgccgtagctgctgct
aattgcattaatattccattaatgaggcaaagggaactcaaagttggcattcccgtcacg
gatgagaatgggaaccgcttgggggagtcggcgaacgctgcgaaacaagccatcacgcaa
gttgtcgtgtccaggattctcatggcagcccctggcatggttttttgccttaaaagcttt
cttgtgcacgcctctcatcgcaaactgcccttgaatcctgcctttgatgtgagaacagga
ctaactggcgttaaatcggcattttctacatcaggtctccagcctgctcttgacctgact
ccaacacacaaagcagcggcattttgttgtctgtcattttctaaatttaaacctcatgga
caggagcccttcatcaccttggagcctactgaagagccccccttgaagagggcaggacct
tcagaacttgctctgggagcctga

>gi568815593f:175392104_175626731|GENSCAN_predicted_peptide_6|313_aa
MQPEATRFLTSSIASVDNIIIVIPEIGVRERKAHVGIPSVPGPGGAGTAEYFTDLTIEEP
ESQVLSKTLRRGNGTLALLVTAFWWLSTTYTRGSQNKTPRPAAAAAPENLLEKQILGPTP
DLLTQNLRDGAQISVFHKPPGGPDAGSTQDCSFKRQEGGRKEGHTSSFEEEDFQKSQAVT
SVATYTSLPEHACFFSKIPESGGLWYGDLPVSQLPKTTLLSVFAFQGLLILGKPKQLFPC
YLHSAGDMAMDRTEIQILAVMSLLLCAPKYVNDDPSHGFLESGEISYCRQECMVMTLSGP
AGVGKTICGNATS

>gi568815593f:175392104_175626731|GENSCAN_predicted_CDS_6|942_bp
atgcagccagaggccacaagattcctaacctcctcaattgcttctgtagataacatcatt
attgtaatacctgagattggtgttcgagaaagaaaggctcatgtgggaatccccagcgtc
ccaggccccgggggagcaggcactgctgagtacttcaccgatttgacaattgaggaacct
gagtcccaggtcttgtccaagacactgagaaggggaaatgggactctggctctcctggtc
acagccttttggtggctttccacgacctacaccagggggtctcaaaataagacccccaga
ccagctgcagcagcagcacctgagaacctgttagaaaagcaaattcttggccccacccca
gacctactgacccagaacctcagagatggtgcccagatatctgtatttcacaagcccccg
ggtggtcctgatgctggctccacacaggattgttcatttaagcgtcaggaaggaggaagg
aaagaaggacatacttcctcctttgaagaagaagacttccagaaatcgcaggctgtgaca
tctgtagccacctacacgtcccttccggagcatgcatgctttttctccaagatacctgag
tccgggggattgtggtatggagatctacctgtctcacagctgcccaaaaccacacttctg
tctgtctttgcctttcagggcctgttgatcttggggaagccaaagcagctcttcccgtgc
tatctgcacagtgctggggatatggcaatggacagaacagaaatccaaatccttgccgtc
atgagcttattgttatgtgcccccaagtacgtcaacgatgacccttcccatggtttcttg
gaatctggtgaaatctcttattgccggcaagagtgtatggtgatgacactctcaggccct
gctggtgttggaaaaaccatttgtggcaatgccacttcctaa

>gi568815593f:175392104_175626731|GENSCAN_predicted_peptide_7|129_aa
MMIMVMVMVVTVMVMVRMMMMMVMVVMVRMTMVMVRMMIAMVNDDNYYCGDYNYGDDGED
DDGEDDDGKDDDGDGDNVGNGDDGDGDDKDNDGGTDYGDDDDAEDEDDDDDSDCYVLNVF
VLAKIHVET

>gi568815593f:175392104_175626731|GENSCAN_predicted_CDS_7|390_bp
atgatgatcatggtgatggtgatggtggtgacagtgatggtgatggtgagaatgatgatg
atgatggtgatggtggtgatggtgaggatgacaatggtgatggtgaggatgatgatagcg
atggtgaatgatgataattattactgtggtgattataattatggtgatgatggtgaggat
gatgatggtgaggatgatgatggtaaggatgatgatggtgatggtgataatgttggtaat
ggtgatgatggtgatggtgatgataaggataatgatggtggtactgattatggtgatgat
gatgatgctgaggatgaggatgatgatgatgatagtgattgctatgttttaaatgttttt
gtccttgccaaaattcatgttgaaacttaa