GENSCAN 1.0	Date run:  3-Nov-116	Time: 23:14:00

Sequence gi568815596r:70197292_70402011 : 204720 bp : 43.61% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   3736   3775   40                              -2.16
 1.01 Init +   4682   4912  231  1  0   60  110   198 0.516  15.78
 1.02 Intr +   5339   5479  141  1  0   54   76    56 0.308   1.55
 1.03 Intr +   6056   6232  177  1  0   16   32   158 0.746   3.12
 1.04 Term +   6920   7321  402  1  0   16   51   212 0.982   5.45
 1.05 PlyA +   8416   8421    6                               1.05

 2.07 PlyA -   9520   9515    6                               1.05
 2.06 Term -  21710  21690   21  2  0  114   36     2 0.017  -4.09
 2.05 Intr -  27338  27263   76  1  1   73   80    60 0.155   3.22
 2.04 Intr -  30531  30444   88  1  1   62   97    60 0.311   3.33
 2.03 Intr -  32027  31973   55  2  1   65   92     2 0.395  -3.15
 2.02 Intr -  33563  33465   99  2  0  115  121    55 0.871  11.81
 2.01 Init -  51096  50941  156  0  0   91   57    95 0.415   4.61
 2.00 Prom -  55780  55741   40                              -6.76

 3.00 Prom +  59071  59110   40                              -7.66
 3.01 Init +  60874  60985  112  0  1   95   74   243 0.998  21.97
 3.02 Intr +  62069  62275  207  0  0   94   71   189 0.981  16.85
 3.03 Intr +  63921  64095  175  1  1  126   76    89 0.988  10.50
 3.04 Intr +  77668  77879  212  1  2   85   94   323 0.999  31.16
 3.05 Intr +  78223  78375  153  2  0   69  115    73 0.771   8.14
 3.06 Term +  79443  80101  659  1  2   94   45   465 0.999  36.92
 3.07 PlyA +  80214  80219    6                               1.05

 4.05 PlyA -  82025  82020    6                               1.05
 4.04 Term -  84393  84343   51  0  0  106   36    61 0.584   0.13
 4.03 Intr -  90901  90777  125  2  2   83  103    61 0.770   7.40
 4.02 Intr -  92081  92059   23  1  2  122  103    28 0.129   4.89
 4.01 Init -  96358  96327   32  1  2   78  106     0 0.092   0.06
 4.00 Prom -  97278  97239   40                              -2.86

 5.04 PlyA -  98711  98706    6                               1.05
 5.03 Term - 100186  99998  189  1  0  117   42   222 0.999  17.95
 5.02 Intr - 103689 103549  141  0  0  131   94   181 0.996  23.55
 5.01 Init - 104720 104634   87  2  0  108   74   146 0.735  15.87
 5.00 Prom - 138212 138173   40                              -3.26

 6.06 PlyA - 138231 138226    6                               1.05
 6.05 Term - 160586 160491   96  2  0   85   41    92 0.382   2.17
 6.04 Intr - 171052 170968   85  0  1   85   99    40 0.050   4.62
 6.03 Intr - 183205 183150   56  1  2   47   71    57 0.002  -2.32
 6.02 Intr - 188828 188728  101  0  2   79   54    60 0.015   1.53
 6.01 Init - 200152 200083   70  1  1   61   55    75 0.056   2.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  23175  23342  168  2  0   81   54   148 0.879   5.46
S.002 Term +  95941  96231  291  0  0   96   48   224 0.842  14.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:70197292_70402011|GENSCAN_predicted_peptide_1|316_aa
MWPQHGLRYLVAAVLSRWALVETWAEVDRSPMSMEKALKHLEAYNTEKEGAFASRVGWAF
LTMLWKVHAQSLRDTAQVSRQLAQGKGDHILTEWLMAAMWTGWNDARELSKTVSKWQSYA
ELVEDTRDQRPHVELAIHWYPTNVQQVLVLVGTDADYSLVYGKRDKFLGKAAYTDGYRGQ
SVKMTVDYQELNKVTAPLHAAVLSITDLMDHLTMELGQYHYAVDLANASLSDDIAPESQE
QFGFTWEGRQWTFTVLPQGYVHSPTICHGLVATDLATWKFPKGIRLFHYIDDIMLTSDSP
ADLEAVVPLLQQHLAA

>gi568815596r:70197292_70402011|GENSCAN_predicted_CDS_1|951_bp
atgtggccccaacatgggttgcggtacttggtggcagctgtgctgtccagatgggccctg
gtggaaacatgggcagaggtagacaggtcccccatgagcatggagaaggccctgaagcac
ctggaagcatacaacaccgagaaggagggtgcctttgccagcagagttggatgggcattt
ttgactatgctatggaaagtgcatgcccagtccctgcgggatacagcacaggtgagcagg
cagttggcacaagggaaaggtgaccatatcctgactgaatggctgatggcagccatgtgg
acagggtggaatgatgccagagaattatcaaaaactgtgagtaaatggcaatcatatgca
gagctggtggaggacaccagagatcagaggccacatgtggaattggcaatccactggtac
cccaccaatgtacagcaggtgttggtgctggtaggtactgatgcagattatagcctcgtc
tatgggaaacgggataagtttttaggcaaggctgcatacacagatggttatagaggccag
tcagtgaaaatgacagtggactatcaagaactaaataaagtaacagcccctttacatgca
gcagtcctgtctatcacggatttgatggaccacctgacgatggaattgggacagtaccat
tatgcagtggatttggctaatgcatccctttcagatgatatcgctccagagagccaggaa
cagtttggcttcacatgggaagggcgacaatggactttcacagtgttgccacagggctac
gtgcatagtcccaccatatgtcatggtctcgttgctacggatttagccacctggaaattt
ccaaaggggatccgcctattccattacattgatgatattatgttaacctctgattctcct
gcagatttagaagctgtggtgcccctcttgcaacaacatttggcagcatga

>gi568815596r:70197292_70402011|GENSCAN_predicted_peptide_2|164_aa
MREAGWWSSRREGLGPAPLPAYCSPWTPRYRGFCFLSMHLDAYNQDPICEDETAGNDPYC
FVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWSFSAFQ

>gi568815596r:70197292_70402011|GENSCAN_predicted_CDS_2|495_bp
atgagggaggcgggatggtggtcgtcccggagggaaggcctcggccctgcgccgctccca
gcctattgttctccgtggacaccgcgatatcgtggtttttgtttccttagcatgcacctg
gatgcttacaaccaagacccaatctgtgaggacgagacagctggaaatgatccctattgt
tttgtggagtttcatgagcatcgtcatgcagctgcagcattagctgctatgaatggacgg
aagataatgggtaaggaagtcaaagtgaattgggcaacaacccctagcagtcaaaagaaa
gatacaagcaatcatttccatgtctttgttggtgatctcagcccagaaattacaactgaa
gatataaaagctgcttttgcaccatttggaagaatatcagatgcccgagtggtaaaagac
atggcaacaggaaagtctaagggatatggctttgtctcctttttcaacaaatggtctttc
tccgcatttcaataa

>gi568815596r:70197292_70402011|GENSCAN_predicted_peptide_3|505_aa
MGRVVAELVSSLLGLWLLLCSCGCPEGAELRAPPDKIAIIGAGIGGTSAAYYLRQKFGKD
VKIDLFEREEVGGRLATMMVQGQEYEAGGSVIHPLNLHMKRFVKDLGLSAVQASGGLLGI
YNGETLVFEESNWFIINVIKLVWRYGFQSLRMHMWVEDVLDKFMRIYRYQSHDYAFSSVE
KLLHALGGDDFLGMLNRTLLETLQKAGFSEKFLNEMIAPVMRVNYGQSTDINAFVGAVSL
SCSDSGLWAVEGGNKLVCSGLLQASKSNLISGSVMYIEEKTKTKYTGNPTKMYEVVYQIG
TETRSDFYDIVLVATPLNRKMSNITFLNFDPPIEEFHQYYQHIVTTLVKGELNTSIFSSR
PIDKFGLNTVLTTDNSDLFINSIGIVPSVREKEDPEPSTDGTYVWKIFSQETLTKAQILK
LFLSYDYAVKKPWLAYPHYKPPEKCPSIILHDRLYYLNGIECAASAMEMSAIAAHNAALL
AYHRWNGHTDMIDQDGLYEKLKTEL

>gi568815596r:70197292_70402011|GENSCAN_predicted_CDS_3|1518_bp
atggggcgcgtcgtcgcggagctcgtctcctcgctgctggggttgtggctgttgctgtgc
agctgcggatgccccgagggcgccgagctgcgtgctccgccagataaaatcgcgattatt
ggagccggaattggtggcacttcagcagcctattacctgcggcagaaatttgggaaagat
gtgaagatagacctgtttgaaagagaagaggtcgggggccgcctggctaccatgatggtg
caggggcaagaatacgaggcaggaggttctgtcatccatcctttaaatctgcacatgaaa
cgttttgtcaaagacctgggtctctctgctgttcaggcctctggtggcctactggggata
tataatggagagactctggtatttgaggagagcaactggttcataattaacgtgattaaa
ttagtttggcgctatggatttcaatccctccgtatgcacatgtgggtagaggacgtgtta
gacaagttcatgaggatctaccgctaccagtctcatgactatgccttcagtagtgtcgaa
aaattacttcatgctctaggaggagatgacttccttggaatgcttaatcgaacacttctt
gaaaccttgcaaaaggccggcttttctgagaagttcctcaatgaaatgattgctcctgtt
atgagggtcaattatggccaaagcacggacatcaatgcctttgtgggggcggtgtcactg
tcctgttctgattctggcctttgggcagtagaaggtggcaataaacttgtttgctcaggg
cttctgcaggcatccaaaagcaatcttatatctggctcagtaatgtacatcgaggagaaa
acaaagaccaagtacacaggaaatccaacaaagatgtatgaagtggtctaccaaattgga
actgagactcgttcagacttctatgacatcgtcttggtggccactccgttgaatcgaaaa
atgtcgaatattacttttctcaactttgatcctccaattgaggaattccatcaatattat
caacatatagtgacaactttagttaagggggaattgaatacatctatctttagctctaga
cccatagataaatttggccttaatacagttttaaccactgataattcagatttgttcatt
aacagtattgggattgtgccctctgtgagagaaaaggaagatcctgagccatcaacagat
ggaacatatgtttggaagatcttttcccaagaaactcttactaaagcacaaattttaaag
ctctttctgtcctatgattatgctgtgaagaagccatggcttgcatatcctcactataag
cccccggagaaatgcccctctatcattctccatgatcgactttattacctcaatggcata
gagtgtgcagcaagtgccatggagatgagtgccattgcagcccacaacgctgcactcctt
gcctatcaccgctggaacgggcacacagacatgattgatcaggatggcttatatgagaaa
cttaaaactgaactatga

>gi568815596r:70197292_70402011|GENSCAN_predicted_peptide_4|76_aa
MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV
VIRGNSIIMLEALERV

>gi568815596r:70197292_70402011|GENSCAN_predicted_CDS_4|231_bp
atgagcaaagctcaccctcccgagttgaaaaaatttatggacaagaagttatcattgaaa
ttaaatggtggcagacatgtccaaggaatattgcggggatttgatccctttatgaacctt
gtgatagatgaatgtgtggagatggcgactagtggacaacagaacaatattggaatggtg
gtaatacgaggaaatagtatcatcatgttagaagccttggaacgagtataa

>gi568815596r:70197292_70402011|GENSCAN_predicted_peptide_5|138_aa
MAELQQLRVQEAVESMVKSLERENIRKMQGLMFRCSASCCEDSQASMKQVHQCIERCHVP
LAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVKQQLDSCVTKCVDDHMH
LIPTMTKKMKEALLSIGK

>gi568815596r:70197292_70402011|GENSCAN_predicted_CDS_5|417_bp
atggctgagctgcagcagctccgggtgcaggaggcggtggagtccatggtgaagagtctg
gaaagagagaacatccggaagatgcagggtctcatgttccggtgcagcgccagctgttgt
gaggacagccaggcctccatgaagcaggtgcaccagtgcatcgagcgctgccatgtgcct
ctggctcaagcccaggctttggtcaccagtgagctggagaagttccaggaccgcctggcc
cggtgcaccatgcattgcaacgacaaagccaaagattcaatagatgctgggagtaaggag
cttcaggtgaagcagcagctggacagttgtgtgaccaagtgtgtggatgaccacatgcac
ctcatcccaactatgaccaagaagatgaaggaggctctcttatcaattggaaaataa

>gi568815596r:70197292_70402011|GENSCAN_predicted_peptide_6|135_aa
MPLDFVANDDKGRDGEEDSAKVVNSSHICSSFLKIEIGWCLPVWKPTKAKSKTASKLKIS
IDEDVEELELSCITGGEKRLSTGINCDPPVNNLSDSFLTFDAGQHLEQEGQKAALVTTNE
LILLREAIRKRNFTP

>gi568815596r:70197292_70402011|GENSCAN_predicted_CDS_6|408_bp
atgccattagattttgttgccaatgatgacaaaggcagagatggagaggaagacagtgct
aaagttgttaattcttcgcacatctgcagcagcttcctgaagatagaaatcggttggtgc
ctacctgtttggaaacccaccaaagcaaagagtaaaacagcatccaaattgaagataagt
attgatgaggatgtggaggaattagaactctcatgcattactggtggggagaagagactc
agcactggaatcaactgtgatccacctgtgaacaatttaagtgactccttccttactttt
gatgcagggcagcatttggagcaggaaggacagaaggctgctcttgtcaccaccaatgag
ctcatccttctccgagaggcaataagaaagcgaaatttcaccccatga