GENSCAN 1.0	Date run:  4-Nov-116	Time: 00:08:51

Sequence gi568815587r:77969990_78179744 : 209755 bp : 45.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   9113   9007  107  0  2   80  116    59 0.886   7.83
 1.03 Intr -  11587  11470  118  1  1  110  106    77 0.980  11.74
 1.02 Intr -  21310  21119  192  1  0   96  116    19 0.942   5.19
 1.01 Init -  24654  24601   54  0  0   94  115    68 0.986  11.38
 1.00 Prom -  33071  33032   40                              -4.56

 2.03 PlyA -  33775  33770    6                               1.05
 2.02 Term -  47281  46604  678  1  0  102   42   810 0.964  71.49
 2.01 Init -  53221  53171   51  1  0   91  127    30 0.932   6.50
 2.00 Prom -  55141  55102   40                              -5.36

 3.00 Prom +  55155  55194   40                              -2.56
 3.01 Init +  56596  56598    3  0  0  108  101     0 0.346   3.30
 3.02 Intr +  64964  65083  120  1  0   38   41   129 0.229   3.89
 3.03 Intr +  74365  74443   79  0  1   66   48    61 0.000  -0.98
 3.04 Intr +  92164  92217   54  2  0  148   82    42 0.251   8.55
 3.05 Term +  93882  94333  452  1  2   29   41   685 0.233  53.25
 3.06 PlyA +  95812  95817    6                               1.05

 4.04 PlyA -  96347  96342    6                              -0.45
 4.03 Term -  97723  97659   65  2  2   30   49    99 0.196  -1.75
 4.02 Intr - 103152 103009  144  1  0   54   63    61 0.233   0.45
 4.01 Init - 109755 109590  166  0  1   94  105   288 0.972  29.19
 4.00 Prom - 120701 120662   40                              -4.06

 5.00 Prom + 132080 132119   40                              -4.96
 5.01 Init + 166724 166760   37  1  1   69  101    37 0.900   3.27
 5.02 Intr + 169481 169585  105  0  0   59   42    99 0.765   2.59
 5.03 Intr + 171606 171713  108  1  0   42   93   215 0.947  17.66
 5.04 Term + 177937 177947   11  2  2  106   54     0 0.213  -3.24
 5.05 PlyA + 183010 183015    6                               1.05

 6.04 PlyA - 183491 183486    6                               1.05
 6.03 Term - 199242 199104  139  2  1   93   43    43 0.215  -2.26
 6.02 Intr - 200624 200535   90  1  0   54  100    42 0.570   1.11
 6.01 Init - 204565 203787  779  1  2   68   98  1312 0.836 123.17
 6.00 Prom - 205496 205457   40                              -1.86

 7.00 Prom + 206106 206145   40                              -6.26
 7.01 Init + 206821 206882   62  0  2  116   37   105 0.448   8.92
 7.02 Intr + 208463 208562  100  2  1   55   67    60 0.121   0.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  82770  82676   95  0  2   71   80    53 0.938   2.65
S.002 Init + 113507 113543   37  1  1   92  110    49 0.861   7.70


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:77969990_78179744|GENSCAN_predicted_peptide_1|157_aa
MAAHLKKRVYEEFTKVVQPQEEIATKKLRLTKPSKSAALHIDLCKATSPADALQYLLQFA
RKPVEAESVEGVVRILLEHYYKENDPSVRLKIASLLGLLSKTAGFSPDCIMDDAINILQN
EKSHQVLAQLLDTLLAIGTKLPENQAIQMRLVDVACK

>gi568815587r:77969990_78179744|GENSCAN_predicted_CDS_1|471_bp
atggcggcgcaccttaagaagcgggtttatgaggaattcacgaaagtggttcagccacag
gaggaaattgctactaagaaactccgactaacaaaaccaagtaaatctgcagcactccac
atagatctgtgtaaagctacctccccagcagatgctttgcaatacttgctccagtttgcc
aggaagcctgtcgaggcggaaagcgtagagggagtagtcaggattctcttggaacattat
tacaaggagaatgatccatctgtgagactgaaaattgcatcattgttgggtttattatca
aagacagcaggattttcaccagactgcattatggatgatgccatcaacatcctgcagaat
gaaaagtctcatcaagtcctagctcaactgctggatactttgcttgcaattggcactaag
ctaccagagaatcaagctatccaaatgcgattagttgatgtggcctgcaag

>gi568815587r:77969990_78179744|GENSCAN_predicted_peptide_2|242_aa
MTSQTPLPQSPRPRRPTMSTVVELNVGGEFHTTTLGTLRKFPGSKLAEMFSSLAKASTDA
EGRFFIDRPSTYFRPILDYLRTGQVPTQHIPEVYREAQFYEIKPLVKLLEDMPQIFGEQV
SRKQFLLQVPGYSENLELMVRLARAEAITARKSSVLVCLVETEEQDAYYSEVLCFLQDKK
MFKSVVKFGPWKAVLDNSDLMHCLEMDIKAQGYKVFSKFYLTYPTKRNEFHFNIYSFTFT
WW

>gi568815587r:77969990_78179744|GENSCAN_predicted_CDS_2|729_bp
atgacgagccagacccctctgccccagtccccccggcccaggcggccaacgatgtctact
gttgtggagctgaacgtcgggggtgagttccacaccaccaccctgggtaccctgaggaag
tttccgggctcaaagctggcagagatgttctctagcttagccaaggcctccacggacgcg
gagggccgcttcttcatcgaccgccccagcacctatttcagacccatcctggactacctg
cgcactgggcaagtgcccacacagcacatccctgaagtgtaccgtgaggctcagttctac
gaaatcaagcctttggtcaagctgctggaggacatgccacagatctttggtgagcaggtg
tctcggaagcagtttttgctgcaagtgccgggctacagcgagaacctggagctcatggtg
cgcctggcacgtgcagaagccataacagcacggaagtccagcgtgcttgtgtgcctggtg
gaaactgaggagcaggatgcatattattcagaggtcctgtgttttctgcaggataagaag
atgttcaagtctgttgtcaagtttgggccctggaaggcggtcctagacaacagcgacctc
atgcactgcctggagatggacattaaggcccaggggtacaaggtattctccaagttctac
ctgacgtaccccaccaaaagaaacgaattccattttaacatttattcattcaccttcacc
tggtggtga

>gi568815587r:77969990_78179744|GENSCAN_predicted_peptide_3|235_aa
MPEIEVNLQRNIELRVDENLIAGYHLSTDEALPKALPLEFPKNLPEKDLVEESFYLGVRG
LRQNETGGVGGIIIQQISPEAVEEAEEATMQVLTKRYPKNCLLTVMDRYAAEVHNMEQVV
MIPSLLRDVQLSGPGGQAQAEAPDLYTYFTMLKAICVDVDHGLLPREEWQAKVAGSEENG
TAETEEVEDESASGELDLEAQFHLHFSSLHHILMHLTEKAQEVTRKYQEMTGQVW

>gi568815587r:77969990_78179744|GENSCAN_predicted_CDS_3|708_bp
atgcctgagattgaagttaacctacaaaggaacatagaactaagagttgatgagaacctg
attgccggctatcatttgagcactgatgaagctctgcctaaggccctacccctggagttt
ccgaaaaatcttcctgaaaaggacctggtggaagagagcttctatctaggggtgagggga
ctccggcagaatgagactggaggcgtgggaggtatcatcattcagcagatttcaccagag
gcagtggaggaggcagaggaagcaaccatgcaggtgctaaccaagcgttaccccaagaac
tgcctgctgaccgtcatggaccggtatgcagccgaggtgcacaacatggagcaggtggtg
atgatccccagccttctgcgggacgtgcagctgagtgggcctgggggccaggcccaggct
gaggcccctgatctctacacctacttcaccatgctcaaggccatctgtgtggatgtggac
catgggctgctgccgcgggaggagtggcaggccaaggtggcaggcagcgaagagaatgga
accgcagagacagaggaagtcgaggacgagagtgcctcaggagagctggacctggaagcc
cagttccacctgcacttctccagcctccatcacatcctcatgcacctcaccgagaaagcc
caggaggtgacaaggaaataccaggaaatgacgggacaagtttggtag

>gi568815587r:77969990_78179744|GENSCAN_predicted_peptide_4|124_aa
MIARRNPEPLRFLPDEARSLPPPKLTDPRLLYIGFLGYCSGLIDNLIRRRPIATAGLHRQ
LLYITAFFFAGYYLVKREDYLYAVRDREMFGYMKLHPEDFPEEVNCSADLIKESVFYHVK
GSVE

>gi568815587r:77969990_78179744|GENSCAN_predicted_CDS_4|375_bp
atgatcgcacggcggaacccagaacccttacggtttctgccggatgaggcccggagcctg
cccccgcccaagctgaccgacccgcggctcctctacatcggcttcttgggctactgctcc
ggcctgattgataacctaatccggcggaggccgatcgcgacggctggtttgcatcgccag
cttctatatattacggcctttttttttgctggatattatcttgtaaaacgtgaagactac
ctgtatgctgtgagggaccgtgaaatgtttggatatatgaaattacatccagaggatttt
cctgaagaagtgaactgctccgccgacctcatcaaagagtctgtcttctatcatgtgaag
ggatctgtggagtga

>gi568815587r:77969990_78179744|GENSCAN_predicted_peptide_5|86_aa
MAQLDVIDGIFQSPGRASPLLCGDEKAFEKSHPERQSRKPIASTRGNSTVKWAAEDDDDD
DLDTEKQKTNEDDQTAKKDKLKEGEK

>gi568815587r:77969990_78179744|GENSCAN_predicted_CDS_5|261_bp
atggctcaactagatgtcatagatggcatcttccaatcccctggccgtgcgagtccctta
ctatgtggggatgagaaggcatttgagaagagtcaccccgagcgccaaagccgaaaacca
attgccagtacccgtggcaattctacagtcaaatgggcagctgaagatgatgatgatgat
gatcttgacaccgagaagcagaagaccaatgaagatgaccagacagcaaaaaaggataag
ttaaaagaaggtgaaaaatga

>gi568815587r:77969990_78179744|GENSCAN_predicted_peptide_6|335_aa
MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDRDGKVFRYIL
NFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEKEVELSKAEKNAMLNITLNQRV
QTVHFTVREAPQIYSLSSSSMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQD
PNHLTLDWVANVEGLPEEEYTKQNLKRLWVVPANKQINSFQVFVEEVLKIALSDGFCIDS
SHPHALDFMNNKIIRLIRYRLGELSLLLGKSMRKTENKRSAVMAAPSTDGGLWADGGGWL
GNVACDQLQEQNNPDNRPIKGRDESLAALSAQTAW

>gi568815587r:77969990_78179744|GENSCAN_predicted_CDS_6|1008_bp
atgtccgaccccatcacgctgaacgtcggggggaagctctatacaacctcactggcgacc
ctgaccagcttccctgactccatgctaggcgccatgttcagcgggaagatgcccaccaag
agggacagccagggcaactgcttcattgaccgtgacggcaaagtgttccgctatatcctc
aacttcctgcggacctcccaccttgacctgcctgaggacttccaggagatggggctgctc
cgcagggaggccgacttctaccaggtgcagcccctgattgaggccctgcaggagaaggaa
gtggagctctccaaggccgagaagaatgccatgctcaacatcacactgaaccagcgtgtg
cagacggtccacttcactgtgcgcgaggcaccccagatctacagcctctcctcttccagc
atggaggtcttcaacgccaacatcttcagcacctcctgcctcttcctcaagctccttggc
tctaagctcttctactgctccaatggcaatctctcctccatcaccagccacttgcaggac
cccaaccacctgactctggactgggtggccaatgtggagggcctgccagaggaggagtac
accaagcagaacctcaagaggctctgggtggtgcccgccaacaagcagatcaacagcttc
caggtcttcgtggaagaggtactgaaaatcgctctgagcgatggcttctgcatcgattct
tctcacccacatgctctggattttatgaacaataagattattcgattaatacggtacagg
ttaggtgaactcagccttctgcttggcaaaagcatgagaaagacggagaacaaacgttca
gcagtgatggcagcaccatcgacagacggggggctctgggctgatgggggtggctggctg
ggaaacgtggcctgtgatcagctccaggagcaaaacaaccctgataacaggcccatcaaa
gggagggacgagagtctggcagctctgtctgcccagacagcctggtga

>gi568815587r:77969990_78179744|GENSCAN_predicted_peptide_7|54_aa
MTKSCLYNNNNNNNNNNNKAGATVSIITNPRPCYKRQNDMTRGEFHESAEVCSQ

>gi568815587r:77969990_78179744|GENSCAN_predicted_CDS_7|162_bp
atgacgaaatcctgtctctacaacaacaacaacaacaacaacaacaacaacaacaaagca
ggggccacagtgtccatcatcacaaatccacggccctgctacaaaaggcaaaatgacatg
acacgaggggagtttcatgagtcggcggaggtttgcagtcag