GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:16:58

Sequence gi568815586r:15521320_15782951 : 261632 bp : 37.00% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   5737   5776   40                              -2.65
 1.01 Init +  16039  16192  154  0  1   78   99    76 0.397   7.89
 1.02 Intr +  25250  25389  140  0  2   68   84    78 0.317   4.66
 1.03 Intr +  30195  30352  158  2  2    7   97   127 0.301   3.39
 1.04 Intr +  36136  36204   69  1  0   79  105    29 0.539   1.08
 1.05 Intr +  41243  41305   63  2  0   85   63    89 0.597   3.01
 1.06 Intr +  44274  44309   36  0  0   82  106    25 0.274   0.16
 1.07 Intr +  48098  48179   82  2  1   19  105    54 0.405  -1.08
 1.08 Intr +  57534  57624   91  2  1  109   66    95 0.982   8.05
 1.09 Intr +  58720  58796   77  2  2  106   95   105 0.999  11.32
 1.10 Intr +  59378  59512  135  1  0   89   83    58 0.967   5.24
 1.11 Intr +  60360  60482  123  2  0   91   92   193 0.994  19.86
 1.12 Intr +  65578  65732  155  0  2   75   91   131 0.989  10.05
 1.13 Intr +  68136  68271  136  0  1   57   75   155 0.872  10.75
 1.14 Intr +  68906  68984   79  1  1   49   57    90 0.085   0.21
 1.15 Intr +  82934  83020   87  0  0   66   82    49 0.034   1.12
 1.16 Intr +  86544  86689  146  1  2   33   84   125 0.024   5.68
 1.17 Term +  98051  98221  171  1  0   69   43    79 0.018  -1.66
 1.18 PlyA +  98320  98325    6                               1.05

 2.25 PlyA -  98844  98839    6                               1.05
 2.24 Term - 100111  99998  114  1  0   95   28   133 0.900   5.59
 2.23 Intr - 101968 101839  130  0  1  138   64    38 0.998   6.18
 2.22 Intr - 103088 102908  181  0  1   42   56   171 0.931   7.30
 2.21 Intr - 110345 110123  223  2  1   92  103   143 0.909  12.98
 2.20 Intr - 119527 119384  144  1  0   49   99   185 0.996  15.26
 2.19 Intr - 120511 120403  109  0  1   98   75   114 0.999  10.47
 2.18 Intr - 125941 125808  134  1  2   97   60   119 0.989   8.52
 2.17 Intr - 129687 129504  184  2  1   91   53   210 0.984  16.67
 2.16 Intr - 132974 132826  149  2  2   36  115   124 0.983   8.01
 2.15 Intr - 136834 136760   75  1  0  112   81     5 0.665   0.99
 2.14 Intr - 137266 137178   89  2  2   61  119    65 0.997   5.67
 2.13 Intr - 139421 139295  127  2  1   55  107    79 0.909   5.83
 2.12 Intr - 140780 140707   74  0  2   46  103   106 0.983   6.11
 2.11 Intr - 144573 144437  137  2  2   78   74   128 0.979   9.69
 2.10 Intr - 145203 145121   83  0  2   98   83    87 0.995   6.72
 2.09 Intr - 148217 148068  150  2  0   55   93    83 0.901   4.94
 2.08 Intr - 148506 148372  135  0  0   16   42   201 0.948   8.14
 2.07 Intr - 149604 149537   68  1  2   87   63    66 0.002   1.71
 2.06 Intr - 159983 159907   77  1  2   52   78    63 0.032  -0.06
 2.05 Intr - 161653 161574   80  1  2  117  100    33 0.106   4.83
 2.04 Intr - 167720 167642   79  1  1   73   40    87 0.023   1.03
 2.03 Intr - 185717 185633   85  0  1   58   71    55 0.023  -1.24
 2.02 Intr - 201914 201867   48  0  0   63   89    76 0.308   2.93
 2.01 Init - 208250 208187   64  2  1   70   97    48 0.298   5.26
 2.00 Prom - 214291 214252   40                              -6.85

 3.00 Prom + 218735 218774   40                              -5.35
 3.01 Init + 221597 222022  426  1  0   68   86   223 0.622  16.45
 3.02 Term + 240932 241075  144  1  0   10   42   184 0.199   2.93
 3.03 PlyA + 241398 241403    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 155946 156254  309  2  0   23   31   254 0.833   8.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:15521320_15782951|GENSCAN_predicted_peptide_1|633_aa
MEMVSKNQQKRLRSIGQGSKKEHRKVSCPRSQGKRKPQRVEIVQVKPVNKSEPAPPKSLF
AVNKTQTSVTLLWVEEGVADFFEVFCQQVGSSQKTKLQRTYDENAQLISLVTEMNPNVVV
ISVLAILSTLLIGLLLVTLIILRKKHLQMARECGAGTFVNFASLERDGKLPYNCVARISS
WGGSRISVEHQYPVRSKNGLKKRKLTNPVQLDDFDAYIKDMAKDSDYKFSLQFEELKLIG
LDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEGADYINANYIPGYNSPQEYIA
TQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEEPIAYGDITVEMIS
EEEQDDWACRHFRINYADEMQDVMHFNYTAWPDHGVPTANAAESILQFVHMVRQQATKSK
GPMIIHCSAGVGRTGTFIALDRLLQHIRDHEFVDILGLVSEMRSYRMSMVQTEPEDALSL
ERQPKATPADSTACLRAAVVPRHLQSECAPLISQSHMGALSMSMPPTQEQQAIIQAEQDS
PTELKRQRPEFSSPEVPEISKKGHKGGRICAEWPQKSIPVTKPLRCLDPNSVVLLPQDSK
FQEPLLFVPTSLADVTAFCNYYLCDTFLWHLIA

>gi568815586r:15521320_15782951|GENSCAN_predicted_CDS_1|1902_bp
atggagatggtgagtaaaaaccagcaaaagagactgaggagcattggccagggaagcaag
aaagagcacagaaaagtgtcctgtcccaggagccaagggaagagaaagcctcagcgagtg
gagattgtccaggtcaaacctgtgaacaaatctgaaccagctccacccaaatcactcttc
gcagtgaacaaaacccagacttcagtgactttgctgtgggtggaagagggagtagctgat
ttctttgaagttttctgtcaacaagttggctccagtcagaaaaccaaacttcagagaacc
tatgatgaaaatgcacaacttatctctttagttacagagatgaatcccaatgtggtagtg
atctccgtgctggccatccttagcacacttttaattggactgttgcttgttaccctcatt
attcttaggaaaaagcatctgcagatggctagggagtgtggagctggtacatttgtcaat
tttgcatccttagagagggatggaaagcttccatacaactgtgttgctcgaatctcttcc
tggggtggtagcagaatcagtgtggagcaccagtacccagttaggagtaaaaatggttta
aagaagaggaaactgacaaacccggttcaactggatgactttgatgcctatattaaggat
atggccaaagactctgactataaattttctcttcagtttgaggagttgaaattgattgga
ctggatatcccacactttgctgcagatcttccactgaatcgatgtaaaaaccgttacaca
aacatcctaccatatgacttcagccgtgtgagattagtctccatgaatgaagaggaaggt
gcagactacatcaatgccaactatattcctggatacaactcaccccaggagtatattgcc
acccaggggccactgcctgaaaccagaaatgacttctggaagatggtcctgcaacaaaag
tctcagattattgtcatgctcactcagtgtaatgagaaaaggagggtgaaatgtgaccat
tactggccattcacggaagaacctatagcctatggagacatcactgtggagatgatttca
gaggaagagcaggacgactgggcctgtagacacttccggatcaactatgctgacgagatg
caggatgtgatgcattttaactacactgcatggcctgatcatggtgtgcccacagcaaat
gctgcagaaagtatcctgcagtttgtacacatggtccgacagcaagctaccaagagcaaa
ggtcccatgatcattcactgcagtgctggcgtgggacggacaggaacattcattgccctg
gacaggctcttgcagcacattcgggatcatgagtttgttgacatcttagggctggtgtca
gaaatgaggtcataccggatgtctatggtacagacagagcctgaggatgcacttagtctg
gagcgacaacccaaggcaacgccggcagacagcaccgcctgcctcagagcagccgtggta
ccaagacatctacagagtgagtgtgcccctttgatttctcagtcccacatgggcgccctt
agcatgagcatgccccctacacaagagcagcaagctataattcaagcagaacaagatagt
cccactgaactgaagaggcaaagaccagaattcagttcacctgaagtgcctgaaatttct
aaaaaggggcacaagggtggacggatttgtgcagagtggccacagaaatctataccagtg
accaaacccctcagatgtctggatccaaattctgtggtgctgctccctcaagattctaaa
ttccaggaacctcttctctttgtccccacatccttagctgatgtgactgctttctgcaat
tactacctctgtgatacattcctttggcatcttatagcataa

>gi568815586r:15521320_15782951|GENSCAN_predicted_peptide_2|912_aa
MQNAFDSFDAISRLERANERIGSSDSPTAAFRIAEATGVLHTSIVLNLERYYNHFTNEET
RLIEAKACNVGVACFFSAPLLRPLGEHADWQANTQVKDTMNGHISNHPSSFGMYPSQMNG
YGSSPTFSQTDREHGSKTSAKALYEQRKNYARDSVSSVSDISQYRVEHLTTFVLDRKDAM
ITVDDGIRKLKLLDAKGKVWTQDMILQVDDRANELENFPLNTIQHCQAVMHSCSYDSVLA
LVCKEPTQNKPDLHLFQCDEVKANLISEDIESAISDSKGGKQKRRPDALRMISNADPSIP
PPPRAPAPAPPGTVTQVDVRSRVAAWSAWAADQGDFEKPRQYHEQEETPEMMAARIDRDV
QILNHILDDIEFFITKLQKAAEAFSELSKRKKNKKGKRKGPGEGVLTLRAKPPPPDEFLD
CFQKFKHGFNLLAKLKSHIQNPSAADLVHFLFTPLNMVVQATGGPELASSVLSPLLNKDT
IDFLNYTVNGDERQLWMSLGGTWMKARAEWPKEQFIPPYVPRFRNGWEPPMLNFMGATME
QDLYQLAESVANVAEHQRKQEIKRLSTEHSSVSEYHPADGYAFSSNIYTRGSHLDQGEAA
VAFKPTSNRHIDRNYEPLKTQPKKYAKSKYDFVARNNSELSVLKDDILEILDDRKQWWKV
RNASGDSGFVPNNILDIVRPPESGLGRADPPYTHTIQKQRMEYGPRPADTPPAPSPPPTP
APVPVPLPPSTPAPVPVSKVPANITRQNSSSSDSGGSIVRDSQRHKQLPVDRRKSQMEEV
QDELIHRLTIGRSAAQKKFHVPRQNVPVINITYDSTPEDVKTWLQSKGFNPVTVNSLGVL
NGAQLFSLNKDELRTVCPEGARVYSQITVQKAALEDSSGSSELQEIMRRRQEKISAAASD
SGVESFDEGSSH

>gi568815586r:15521320_15782951|GENSCAN_predicted_CDS_2|2739_bp
atgcagaatgcctttgattcctttgatgccatcagtagattggagagggctaatgaaaga
atcggctcaagtgattctcccacagcagccttccggatagctgaagctacaggggttttg
catacttcgattgttcttaaccttgagagatactataaccactttacaaatgaagaaact
aggctcatagaggctaaggcatgcaatgtcggtgtggcttgtttcttcagtgccccgctg
ctcagacctctaggggagcatgcagactggcaggctaacacacaagtgaaagacacaatg
aatggtcatatttctaatcatcccagtagttttggaatgtacccatctcagatgaatggc
tacggatcatcacctaccttttcccagacggacagagaacatggttcaaaaacaagtgca
aaggccctttatgaacaaaggaagaattatgcacgggacagtgtcagcagtgtgtcagat
atatctcaataccgtgttgaacacttgactacctttgtcctggatcggaaagatgctatg
atcactgttgatgatggaataaggaaattgaaattgcttgatgccaagggcaaagtgtgg
actcaagatatgattcttcaagtggatgacagagctaatgaactggagaattttccttta
aacacaatccagcactgccaagctgtgatgcattcatgcagctatgattcagttcttgca
ctggtgtgcaaagagccaacccagaacaagccagatcttcatctcttccagtgtgatgag
gttaaggcaaacctaattagtgaagatattgaaagtgcaatcagtgacagtaaaggaggg
aaacagaagaggcggcccgacgccctgaggatgatttccaatgcagaccctagtataccg
cctccacccagagctcctgcccctgcgccccctgggaccgtcacccaggtggatgttaga
agtcgagtggcagcctggtctgcatgggcagccgaccaaggggactttgagaaaccaagg
cagtatcatgagcaggaagaaacacctgagatgatggcagcccgcattgacagagatgtg
caaatcttaaaccacattttggatgacattgaattttttatcacaaaactccaaaaagca
gcagaagcattttctgagctttctaaaaggaagaaaaacaagaaaggtaaaaggaaagga
ccaggagagggtgttttaacgctgcgggcaaaacctccacctcctgatgaatttcttgac
tgtttccaaaagtttaaacacggatttaaccttctggccaaactgaagtctcatattcag
aatcctagtgctgcagatttggttcactttttgtttactccattaaatatggtggtgcag
gcaacaggaggtcctgaactagccagttcagtacttagtcccctattgaataaggacaca
attgatttcttaaattatactgtcaatggtgatgaacggcagctgtggatgtcattggga
ggaacttggatgaaagccagagcagagtggccaaaagaacagtttattccaccatatgtt
ccacgattccgcaatggctgggagcccccaatgctgaactttatgggagccacaatggaa
caagatctttatcaactggcagaatctgtggcaaatgtagcagaacatcagcgcaaacag
gaaataaaaagattatccacagagcattccagtgtatcagagtatcatccagccgatggc
tatgcgttcagtagcaacatttacacaagaggatcccacctggaccaaggggaagctgct
gttgcttttaagccaacttctaatcgccatatagatagaaattatgaaccactcaaaaca
caacccaagaaatatgccaaatccaagtatgactttgtagcaaggaacaacagtgagctc
tcggttctaaaggatgatattttagagatacttgatgatcggaagcaatggtggaaagtt
cgaaatgcaagtggagactctggatttgtgccaaataacattttggatattgtgagacct
ccagaatctggattggggcgtgctgatccaccttatactcatactatacagaaacaaagg
atggagtatggcccaagaccagctgatactccccctgctccatcacctcctccaacacca
gctcctgttcctgttccccttcccccttccactccagcacctgttcctgtgtcaaaggtc
ccagcaaatataacacgtcaaaacagcagctccagtgacagtggtggcagtatcgtgcga
gacagccagagacacaaacaacttccggtggaccgaaggaaatctcagatggaggaagtg
caagatgaactcatccacagactgaccattggtcggagtgccgctcagaagaaattccat
gtgccacggcagaacgtgccagttatcaatatcacttacgactccacaccagaggatgtg
aagacgtggttacagtcaaagggattcaaccctgtgactgtcaatagtcttggagtatta
aatggtgcacaacttttctctctcaataaggatgaactgaggacagtctgccctgaaggg
gcgagagtctatagccaaatcactgtacaaaaagctgcattggaggatagcagtggcagc
tccgagttacaagaaattatgagaagacgacaggaaaaaatcagtgctgccgctagtgat
tcaggagtggaatcttttgatgaaggaagcagtcactaa

>gi568815586r:15521320_15782951|GENSCAN_predicted_peptide_3|189_aa
MRHEKEIKGIQLGKQEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSEVSGYKINVQKS
QAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQFTRDVKDLFKENYKPLLNEIKEDTNK
WKNIPCSWIGRINIVKMAILPKLRWLLSKRQTITNADKDVEKREPSYTVGGDVNYCNRYA
EQFGGASKN

>gi568815586r:15521320_15782951|GENSCAN_predicted_CDS_3|570_bp
atgaggcacgagaaagaaataaaaggtattcaactaggaaaacaggaagtcaaattgtcc
ctgtttgcagatgacatgattgtctatctagaaaaccccatcgtctcagcccaaaatctc
cttaagctgataagcaacttcagcgaagtctcaggatacaaaatcaatgtgcaaaaatca
caagcattcctatacaccaataacagacaaacagagagtcaaatcatgagtgaactccca
ttcacaattgcttcaaagagaataaaatacctaggaatccaatttacaagggatgtgaag
gacctcttcaaggagaactacaaaccactactcaatgaaataaaagaggacacaaacaaa
tggaagaacattccatgctcatggataggaagaatcaatatcgtgaaaatggccatactg
cccaagttaagatggcttttatccaaaagacagacaataacaaatgccgacaaggatgta
gagaaaagggaaccctcatacactgttggtggcgatgtaaattactgcaaccgctatgca
gaacagtttggcggtgcctcaaaaaactaa