Result of FASTA (ccds) for pF1KB7274
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7274, 745 aa
  1>>>pF1KB7274 745 - 745 aa - 745 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.6606+/-0.00111; mu= -5.3490+/- 0.066
 mean_var=232.8262+/-47.450, 0's: 0 Z-trim(110.0): 17  B-trim: 4 in 1/51
 Lambda= 0.084054
 statistics sampled from 11278 (11285) to 11278 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.347), width:  16
 Scan time:  2.560

The best scores are:                                      opt bits E(32554)
CCDS9946.1 PAPOLA gene_id:10914|Hs108|chr14        ( 745) 4839 600.3 3.4e-171
CCDS78202.1 PAPOLB gene_id:56903|Hs108|chr7        ( 637) 3527 441.2 2.3e-123
CCDS1863.1 PAPOLG gene_id:64895|Hs108|chr2         ( 736) 2817 355.1 2.2e-97
CCDS58334.1 PAPOLA gene_id:10914|Hs108|chr14       ( 285) 1847 237.4 2.4e-62
CCDS58335.1 PAPOLA gene_id:10914|Hs108|chr14       ( 238) 1343 176.2 5.1e-44


>>CCDS9946.1 PAPOLA gene_id:10914|Hs108|chr14             (745 aa)
 initn: 4839 init1: 4839 opt: 4839  Z-score: 3186.9  bits: 600.3 E(32554): 3.4e-171
Smith-Waterman score: 4839; 100.0% identity (100.0% similar) in 745 aa overlap (1-745:1-745)

               10        20        30        40        50        60
pF1KB7 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB7 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB7 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB7 ATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 ATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTAT
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB7 QPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 QPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEES
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KB7 PKKTKTEEDETSEDANCLALSGHDKTEAKEQLDTETSTTQSETIQTAASLLASQKTSSTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS99 PKKTKTEEDETSEDANCLALSGHDKTEAKEQLDTETSTTQSETIQTAASLLASQKTSSTD
              670       680       690       700       710       720

              730       740     
pF1KB7 LSDIPALPANPIPVIKNSIKLRLNR
       :::::::::::::::::::::::::
CCDS99 LSDIPALPANPIPVIKNSIKLRLNR
              730       740     

>>CCDS78202.1 PAPOLB gene_id:56903|Hs108|chr7             (637 aa)
 initn: 3533 init1: 3253 opt: 3527  Z-score: 2328.1  bits: 441.2 E(32554): 2.3e-123
Smith-Waterman score: 3527; 86.1% identity (93.6% similar) in 625 aa overlap (1-625:2-624)

                10        20        30        40        50         
pF1KB7  MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQ
        :::::::::  :  :: ..::..::::::.::::::.:::.:::::.::::::::::::
CCDS78 MMPFPVTTQGPPQPAPPPNRYGVSSPISLAVPKETDCLLTQRLIETLRPFGVFEEEEELQ
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB7 RRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCV
       ::::.: :::::::::::::::::.:::::::::::::::::::::::::::::::::::
CCDS78 RRILVLEKLNNLVKEWIREISESKSLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCV
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KB7 APRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
       :: :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::
CCDS78 APSHVDRSDFFTSFYAKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB7 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
CCDS78 EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSN
              190       200       210       220       230       240

     240       250       260       270       280       290         
pF1KB7 ILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPV
       ::::::::::::::::::::::::.:::::.:::::::.::::::::::.::: ::::::
CCDS78 ILGFLGGVSWAMLVARTCQLYPNAVASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KB7 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWS
       :::::::::::::::::::::::::::::::.::::::.:::::::::: ::::::::::
CCDS78 WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSISTRMVMIEEFKQGLAITHEILLSKAEWS
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB7 KLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
       ::::::.::::::::::::::: ::::.::::::::::::::::::::::::::::::::
CCDS78 KLFEAPSFFQKYKHYIVLLASASTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB7 SFPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEV
       :::::::::: ::::::::::: .:: .::: ::.:::::::::::::::::.::::::.
CCDS78 SFPAPKENPDMEEFRTMWVIGLGLKKPDNSEILSIDLTYDIQSFTDTVYRQAVNSKMFEM
              430       440       450       460       470       480

     480       490       500       510       520       530         
pF1KB7 DMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPT
        :::.:::..::.::::::.:::: :: ::::: .:: :::::.:::   .::::::: :
CCDS78 GMKITAMHLRRKELHQLLPHHVLQDKKAHSTEGRRLTDLNDSSFDLSAGCENSMSVPSST
              490       500       510       520       530       540

     540       550       560       570       580       590         
pF1KB7 SATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSVPQVNSSESSGGTSSESIPQTA
       :. ::.:: ::  :::::::: :: .:::.:::::: :. :::..:::: . .::::...
CCDS78 STMKTGPLISS--SQGRNSPALAVMTASVANIQATEFSLQQVNTNESSGVALNESIPHAV
              550         560       570       580       590        

     600       610       620       630       640       650         
pF1KB7 TQPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSGNAATKIPTPIVGVKRTSSPHKEE
       .:::::: ::  :.:::::: :.. :                                  
CCDS78 SQPAISPSPKAMVARVVSSTCLISHPDLQETQQQTYLIL                     
      600       610       620       630                            

>>CCDS1863.1 PAPOLG gene_id:64895|Hs108|chr2              (736 aa)
 initn: 2784 init1: 2669 opt: 2817  Z-score: 1861.8  bits: 355.1 E(32554): 2.2e-97
Smith-Waterman score: 2844; 61.2% identity (78.8% similar) in 747 aa overlap (13-745:12-736)

               10        20        30        40        50        60
pF1KB7 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR
                   .:  :::::::::::::.::: : . :::::...:::::::.::::..
CCDS18  MKEMSANTVLDSQRQQKHYGITSPISLASPKEIDHIYTQKLIDAMKPFGVFEDEEELNH
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB7 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
       :...:::::::::::: ..::::::: ::. .::::::::::::::::::::::::::::
CCDS18 RLVVLGKLNNLVKEWISDVSESKNLPPSVVATVGGKIFTFGSYRLGVHTKGADIDALCVA
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB7 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
       ::::.::::: ::..::: :. ...:::::.:::::::. :::::::..:::::.::: .
CCDS18 PRHVERSDFFQSFFEKLKHQDGIRNLRAVEDAFVPVIKFEFDGIEIDLVFARLAIQTISD
     120       130       140       150       160       170         

              190       200       210       220       230       240
pF1KB7 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
       .::::::: :..:::::::::::::::::::::::: ..:::::::.::::::..::::.
CCDS18 NLDLRDDSRLRSLDIRCIRSLNGCRVTDEILHLVPNKETFRLTLRAVKLWAKRRGIYSNM
     180       190       200       210       220       230         

              250       260       270       280       290       300
pF1KB7 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
       ::::::::::::::::::::::: :::::::::::::::::::::::::::: :::::::
CCDS18 LGFLGGVSWAMLVARTCQLYPNAAASTLVHKFFLVFSKWEWPNPVLLKQPEESNLNLPVW
     240       250       260       270       280       290         

              310       320       330       340       350       360
pF1KB7 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
       ::::::::::::::::::::::::::::::.::: :::::::::::.::::: .:..:::
CCDS18 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTVMVEEFKQGLAVTDEILQGKSDWSK
     300       310       320       330       340       350         

              370       380       390       400       410       420
pF1KB7 LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
       :.: :::::::.::::: ::: ::...::::::::::::.:::.::.:::::::::::::
CCDS18 LLEPPNFFQKYRHYIVLTASASTEENHLEWVGLVESKIRVLVGNLERNEFITLAHVNPQS
     360       370       380       390       400       410         

              430       440       450       460       470       480
pF1KB7 FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD
       ::. ::.   ... .:: .:..:...::.:....::::::::::::::::: : .:..  
CCDS18 FPGNKEHHKDNNYVSMWFLGIIFRRVENAESVNIDLTYDIQSFTDTVYRQANNINMLKEG
     420       430       440       450       460       470         

              490       500       510                520       530 
pF1KB7 MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGV---------KLTALNDSSLDLSMDSDN
       ::: : :::.::::. :: ..::::::.:   :         :  .:..: :: : :.::
CCDS18 MKIEATHVKKKQLHHYLPAEILQKKKKQSLSDVNRSSGGLQSKRLSLDSSCLDSSRDTDN
     480       490       500       510       520       530         

             540       550         560       570       580         
pF1KB7 SMSVPSPTSATKTSPLNSSGSSQGRNS--PAPAVTAASVTNIQATEVSVPQVNSSESSGG
       .    ::.: .  ::  : : .. :::  :: ...   ..   :  .:.: .       :
CCDS18 GTPFNSPASKSD-SP--SVGETE-RNSAEPAAVIVEKPLSVPPAQGLSIPVI-------G
     540       550           560       570       580               

     590       600       610       620       630        640        
pF1KB7 TSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAATSG-NAATKIPTPIVG
       .. .:  .:.. :..   :  .:.: :   :...:   ..:.   .: .  ::  ::   
CCDS18 AKVDSTVKTVSPPTVCTIPT-VVGRNVIP-RITTPHNPAQGQPHLNGMSNITKTVTP---
      590       600        610        620       630       640      

      650       660       670       680       690       700        
pF1KB7 VKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKEQLDTETSTTQSETIQTAA
        ::. ::  . .::. :  :         :  . .:   :.:.    ...  .:..   .
CCDS18 -KRSHSPSIDGTPKRLKDVEKFIR-----LESTFKDPRTAEERKRKSVDAIGGESMPIPT
            650       660            670       680       690       

      710        720        730       740     
pF1KB7 SLLASQKT-SSTDLSDIPA-LPANPIPVIKNSIKLRLNR
          . .:   : .: :  . .::: : ::::::.: :::
CCDS18 IDTSRKKRLPSKELPDSSSPVPANNIRVIKNSIRLTLNR
       700       710       720       730      

>>CCDS58334.1 PAPOLA gene_id:10914|Hs108|chr14            (285 aa)
 initn: 1847 init1: 1847 opt: 1847  Z-score: 1232.7  bits: 237.4 E(32554): 2.4e-62
Smith-Waterman score: 1847; 100.0% identity (100.0% similar) in 279 aa overlap (1-279:1-279)

               10        20        30        40        50        60
pF1KB7 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
       :::::::::::::::::::::::::::::::::::::::                     
CCDS58 LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWYVFRLY               
              250       260       270       280                    

              310       320       330       340       350       360
pF1KB7 DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK

>>CCDS58335.1 PAPOLA gene_id:10914|Hs108|chr14            (238 aa)
 initn: 1336 init1: 1336 opt: 1343  Z-score: 903.7  bits: 176.2 E(32554): 5.1e-44
Smith-Waterman score: 1343; 90.1% identity (94.8% similar) in 232 aa overlap (1-230:1-231)

               10        20        30        40        50        60
pF1KB7 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCVLTQKLIETLKPFGVFEEEEELQR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
              130       140       150       160       170       180

              190       200         210       220       230        
pF1KB7 DLDLRDDSLLKNLDIRCIRSLNGCRVTDE--ILHLVPNIDNFRLTLRAIKLWAKRHNIYS
       ::::::::::::::::::::::: :      .:... .:. :  .. ..::.        
CCDS58 DLDLRDDSLLKNLDIRCIRSLNGMRKPTSFCVLQFLSDISCFYTSF-VLKLFIAILLTQ 
              190       200       210       220        230         

      240       250       260       270       280       290        
pF1KB7 NILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLP




745 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 22:12:55 2016 done: Sat Nov  5 22:12:55 2016
 Total Scan time:  2.560 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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