Result of FASTA (omim) for pF1KE0096
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0096, 1835 aa
  1>>>pF1KE0096 1835 - 1835 aa - 1835 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 15.0452+/-0.000597; mu= -22.5240+/- 0.037
 mean_var=616.3857+/-130.053, 0's: 0 Z-trim(119.0): 140  B-trim: 0 in 0/58
 Lambda= 0.051659
 statistics sampled from 32454 (32592) to 32454 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.689), E-opt: 0.2 (0.382), width:  16
 Scan time: 21.720

The best scores are:                                      opt bits E(85289)
NP_689854 (OMIM: 609539) AT-rich interactive domai (1835) 12195 926.0       0
XP_006719335 (OMIM: 609539) PREDICTED: AT-rich int (1793) 11908 904.6       0
XP_011536327 (OMIM: 609539) PREDICTED: AT-rich int (1291) 8561 655.1 1.3e-186


>>NP_689854 (OMIM: 609539) AT-rich interactive domain-co  (1835 aa)
 initn: 12195 init1: 12195 opt: 12195  Z-score: 4933.0  bits: 926.0 E(85289):    0
Smith-Waterman score: 12195; 100.0% identity (100.0% similar) in 1835 aa overlap (1-1835:1-1835)

               10        20        30        40        50        60
pF1KE0 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE0 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE0 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE0 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KE0 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KE0 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KE0 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KE0 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KE0 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KE0 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KE0 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KE0 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KE0 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
             1270      1280      1290      1300      1310      1320

             1330      1340      1350      1360      1370      1380
pF1KE0 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
             1330      1340      1350      1360      1370      1380

             1390      1400      1410      1420      1430      1440
pF1KE0 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
             1390      1400      1410      1420      1430      1440

             1450      1460      1470      1480      1490      1500
pF1KE0 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
             1450      1460      1470      1480      1490      1500

             1510      1520      1530      1540      1550      1560
pF1KE0 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
             1510      1520      1530      1540      1550      1560

             1570      1580      1590      1600      1610      1620
pF1KE0 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
             1570      1580      1590      1600      1610      1620

             1630      1640      1650      1660      1670      1680
pF1KE0 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
             1630      1640      1650      1660      1670      1680

             1690      1700      1710      1720      1730      1740
pF1KE0 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
             1690      1700      1710      1720      1730      1740

             1750      1760      1770      1780      1790      1800
pF1KE0 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
             1750      1760      1770      1780      1790      1800

             1810      1820      1830     
pF1KE0 AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
       :::::::::::::::::::::::::::::::::::
NP_689 AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
             1810      1820      1830     

>>XP_006719335 (OMIM: 609539) PREDICTED: AT-rich interac  (1793 aa)
 initn: 11908 init1: 11908 opt: 11908  Z-score: 4817.5  bits: 904.6 E(85289):    0
Smith-Waterman score: 11908; 100.0% identity (100.0% similar) in 1788 aa overlap (1-1788:1-1788)

               10        20        30        40        50        60
pF1KE0 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE0 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE0 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE0 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KE0 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KE0 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KE0 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KE0 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KE0 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KE0 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KE0 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KE0 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KE0 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
             1270      1280      1290      1300      1310      1320

             1330      1340      1350      1360      1370      1380
pF1KE0 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
             1330      1340      1350      1360      1370      1380

             1390      1400      1410      1420      1430      1440
pF1KE0 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
             1390      1400      1410      1420      1430      1440

             1450      1460      1470      1480      1490      1500
pF1KE0 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
             1450      1460      1470      1480      1490      1500

             1510      1520      1530      1540      1550      1560
pF1KE0 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
             1510      1520      1530      1540      1550      1560

             1570      1580      1590      1600      1610      1620
pF1KE0 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
             1570      1580      1590      1600      1610      1620

             1630      1640      1650      1660      1670      1680
pF1KE0 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
             1630      1640      1650      1660      1670      1680

             1690      1700      1710      1720      1730      1740
pF1KE0 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
             1690      1700      1710      1720      1730      1740

             1750      1760      1770      1780      1790      1800
pF1KE0 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
       ::::::::::::::::::::::::::::::::::::::::::::::::            
XP_006 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRNMNED       
             1750      1760      1770      1780      1790          

             1810      1820      1830     
pF1KE0 AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ

>>XP_011536327 (OMIM: 609539) PREDICTED: AT-rich interac  (1291 aa)
 initn: 8561 init1: 8561 opt: 8561  Z-score: 3471.4  bits: 655.1 E(85289): 1.3e-186
Smith-Waterman score: 8561; 100.0% identity (100.0% similar) in 1291 aa overlap (545-1835:1-1291)

          520       530       540       550       560       570    
pF1KE0 IVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTV
                                     ::::::::::::::::::::::::::::::
XP_011                               MYSEYLSTCSKLARGGILTSTGFYKCLRTV
                                             10        20        30

          580       590       600       610       620       630    
pF1KE0 FPNHTVKRVEDSSSNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPNHTVKRVEDSSSNGQAHIHVVGVKRRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAP
               40        50        60        70        80        90

          640       650       660       670       680       690    
pF1KE0 SPAGIPHGSQTIGNHFQRTPVANQSSNLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SPAGIPHGSQTIGNHFQRTPVANQSSNLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQ
              100       110       120       130       140       150

          700       710       720       730       740       750    
pF1KE0 QQNAPVTVIQSKAPIPCEVVKATVIQNSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQNAPVTVIQSKAPIPCEVVKATVIQNSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPV
              160       170       180       190       200       210

          760       770       780       790       800       810    
pF1KE0 TVVNSQTLLHHPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVVNSQTLLHHPSVIPQQSPLHTVVPGQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTST
              220       230       240       250       260       270

          820       830       840       850       860       870    
pF1KE0 VSQGQQLITTSPQPVQTSSQQTSAGSQSQDTVIIAPPQYVTTSASNIVSATSVQNFQVAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSQGQQLITTSPQPVQTSSQQTSAGSQSQDTVIIAPPQYVTTSASNIVSATSVQNFQVAT
              280       290       300       310       320       330

          880       890       900       910       920       930    
pF1KE0 GQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQMVTIAGVPSPQASRVGFQNIAPKPLPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQ
              340       350       360       370       380       390

          940       950       960       970       980       990    
pF1KE0 QGQTYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGQTYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTP
              400       410       420       430       440       450

         1000      1010      1020      1030      1040      1050    
pF1KE0 QSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSQGPPPTVSQMLSVKRQQQQQHSPAPPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPAS
              460       470       480       490       500       510

         1060      1070      1080      1090      1100      1110    
pF1KE0 GESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQ
              520       530       540       550       560       570

         1120      1130      1140      1150      1160      1170    
pF1KE0 TPAQQLLVGQQNVQLVPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TPAQQLLVGQQNVQLVPSAMPPSGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTI
              580       590       600       610       620       630

         1180      1190      1200      1210      1220      1230    
pF1KE0 TVVPNTSFAPATVSQGNATQLIAPAGITMSGTQTGVGLPVQTLPATQASPAGQSSCTTAT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TVVPNTSFAPATVSQGNATQLIAPAGITMSGTQTGVGLPVQTLPATQASPAGQSSCTTAT
              640       650       660       670       680       690

         1240      1250      1260      1270      1280      1290    
pF1KE0 PPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGATNTSNGDTKENEMHVGSLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGATNTSNGDTKENEMHVGSLL
              700       710       720       730       740       750

         1300      1310      1320      1330      1340      1350    
pF1KE0 NGRKYSDSSLPPSNSGKIQSETNQCSLISNGPSLELGENGASGKQNSEQIDMQDIKSDLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGRKYSDSSLPPSNSGKIQSETNQCSLISNGPSLELGENGASGKQNSEQIDMQDIKSDLR
              760       770       780       790       800       810

         1360      1370      1380      1390      1400      1410    
pF1KE0 KPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPMEPQGTLDITQQDTAKGDQLER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPMEPQGTLDITQQDTAKGDQLER
              820       830       840       850       860       870

         1420      1430      1440      1450      1460      1470    
pF1KE0 ISNGPVLTLGGSSVSSIQEASNAATQQFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ISNGPVLTLGGSSVSSIQEASNAATQQFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHST
              880       890       900       910       920       930

         1480      1490      1500      1510      1520      1530    
pF1KE0 TSVIQGHQIIAVPDSGSKVSHSPALSSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TSVIQGHQIIAVPDSGSKVSHSPALSSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKV
              940       950       960       970       980       990

         1540      1550      1560      1570      1580      1590    
pF1KE0 GVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTP
             1000      1010      1020      1030      1040      1050

         1600      1610      1620      1630      1640      1650    
pF1KE0 MPPSPAVQVQGQPNSSQPSPFSGSSQPGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPPSPAVQVQGQPNSSQPSPFSGSSQPGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAA
             1060      1070      1080      1090      1100      1110

         1660      1670      1680      1690      1700      1710    
pF1KE0 TEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TEHGGKDVYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSS
             1120      1130      1140      1150      1160      1170

         1720      1730      1740      1750      1760      1770    
pF1KE0 TKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TKQPTVGGTSSTPRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAAL
             1180      1190      1200      1210      1220      1230

         1780      1790      1800      1810      1820      1830    
pF1KE0 ILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ILKNIGKYSECGRRLLKRHENNLSVLAISNMEASSTLAKCLYELNFTVQSKEQEKDSEML
             1240      1250      1260      1270      1280      1290

        
pF1KE0 Q
       :
XP_011 Q
        




1835 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:24:53 2016 done: Fri Nov  4 03:24:56 2016
 Total Scan time: 21.720 Total Display time:  0.300

Function used was FASTA [36.3.4 Apr, 2011]
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