Result of FASTA (ccds) for pF1KE0096
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0096, 1835 aa
  1>>>pF1KE0096 1835 - 1835 aa - 1835 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.8562+/-0.00129; mu= -10.5610+/- 0.077
 mean_var=443.5206+/-93.571, 0's: 0 Z-trim(110.8): 92  B-trim: 322 in 1/53
 Lambda= 0.060900
 statistics sampled from 11847 (11909) to 11847 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.675), E-opt: 0.2 (0.366), width:  16
 Scan time:  5.480

The best scores are:                                      opt bits E(32554)
CCDS31783.1 ARID2 gene_id:196528|Hs108|chr12       (1835) 12195 1087.9       0


>>CCDS31783.1 ARID2 gene_id:196528|Hs108|chr12            (1835 aa)
 initn: 12195 init1: 12195 opt: 12195  Z-score: 5807.6  bits: 1087.9 E(32554):    0
Smith-Waterman score: 12195; 100.0% identity (100.0% similar) in 1835 aa overlap (1-1835:1-1835)

               10        20        30        40        50        60
pF1KE0 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE0 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE0 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE0 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE0 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE0 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE0 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE0 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE0 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE0 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE0 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
              730       740       750       760       770       780

              790       800       810       820       830       840
pF1KE0 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
              790       800       810       820       830       840

              850       860       870       880       890       900
pF1KE0 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
              850       860       870       880       890       900

              910       920       930       940       950       960
pF1KE0 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
              910       920       930       940       950       960

              970       980       990      1000      1010      1020
pF1KE0 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
              970       980       990      1000      1010      1020

             1030      1040      1050      1060      1070      1080
pF1KE0 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
             1030      1040      1050      1060      1070      1080

             1090      1100      1110      1120      1130      1140
pF1KE0 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
             1090      1100      1110      1120      1130      1140

             1150      1160      1170      1180      1190      1200
pF1KE0 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
             1150      1160      1170      1180      1190      1200

             1210      1220      1230      1240      1250      1260
pF1KE0 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
             1210      1220      1230      1240      1250      1260

             1270      1280      1290      1300      1310      1320
pF1KE0 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
             1270      1280      1290      1300      1310      1320

             1330      1340      1350      1360      1370      1380
pF1KE0 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
             1330      1340      1350      1360      1370      1380

             1390      1400      1410      1420      1430      1440
pF1KE0 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
             1390      1400      1410      1420      1430      1440

             1450      1460      1470      1480      1490      1500
pF1KE0 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
             1450      1460      1470      1480      1490      1500

             1510      1520      1530      1540      1550      1560
pF1KE0 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
             1510      1520      1530      1540      1550      1560

             1570      1580      1590      1600      1610      1620
pF1KE0 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
             1570      1580      1590      1600      1610      1620

             1630      1640      1650      1660      1670      1680
pF1KE0 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
             1630      1640      1650      1660      1670      1680

             1690      1700      1710      1720      1730      1740
pF1KE0 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
             1690      1700      1710      1720      1730      1740

             1750      1760      1770      1780      1790      1800
pF1KE0 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS31 LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
             1750      1760      1770      1780      1790      1800

             1810      1820      1830     
pF1KE0 AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
       :::::::::::::::::::::::::::::::::::
CCDS31 AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
             1810      1820      1830     




1835 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 03:24:52 2016 done: Fri Nov  4 03:24:53 2016
 Total Scan time:  5.480 Total Display time:  0.090

Function used was FASTA [36.3.4 Apr, 2011]
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