GENSCAN 1.0	Date run:  5-Nov-116	Time: 21:12:07

Sequence gi568815595r:72278388_72546623 : 268236 bp : 44.14% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -    669    664    6                               1.05
 1.12 Term -   1164   1051  114  0  0   87   37    53 0.005  -1.33
 1.11 Intr -   9306   9169  138  0  0   61   50    72 0.014   1.36
 1.10 Intr -  10976  10846  131  0  2   56   59    86 0.019   2.91
 1.09 Intr -  17906  17880   27  0  0   93   72    45 0.047   1.49
 1.08 Intr -  26368  26288   81  2  0  129   77     7 0.117   3.31
 1.07 Intr -  32922  32644  279  1  0   39   59   129 0.009   2.55
 1.06 Intr -  41058  40909  150  1  0   47   80    75 0.007   2.73
 1.05 Intr -  41174  41120   55  2  1   75   94    32 0.005   1.05
 1.04 Intr -  44461  44313  149  2  2  106   19    75 0.007   2.35
 1.03 Intr -  50581  50444  138  2  0   77   21    86 0.026   1.24
 1.02 Intr -  53052  52868  185  2  2   81   79    25 0.043   0.33
 1.01 Init -  59647  59514  134  1  2   95   91    83 0.466   8.92
 1.00 Prom -  61821  61782   40                              -3.16

 2.00 Prom +  75049  75088   40                              -5.26
 2.01 Init +  84439  84492   54  0  0   50   73    69 0.400   2.89
 2.02 Intr +  89042  89125   84  1  0   77   75    34 0.101   1.02
 2.03 Term +  92648  92791  144  1  0   67   38   128 0.526   3.61
 2.04 PlyA +  93620  93625    6                               1.05

 3.05 PlyA -  95820  95815    6                               1.05
 3.04 Term - 100250  99998  253  1  1  103   44   314 0.998  23.61
 3.03 Intr - 100751 100653   99  1  0   70   75    62 0.833   2.33
 3.02 Intr - 101040 100864  177  2  0   34  108   198 0.947  15.43
 3.01 Init - 112746 112721   26  0  2   77   81    42 0.215   1.40
 3.00 Prom - 117865 117826   40                              -2.86

 4.08 PlyA - 119185 119180    6                               1.05
 4.07 Term - 165698 165540  159  2  0   24   49   179 0.842   5.54
 4.06 Intr - 168593 168386  208  1  1   87   59    72 0.487   3.28
 4.05 Intr - 169306 169134  173  1  2   83   77    56 0.674   2.74
 4.04 Intr - 184453 184418   36  1  0   77   93    39 0.075   1.76
 4.03 Intr - 188752 188584  169  0  1   71   99    49 0.044   4.25
 4.02 Intr - 193868 193810   59  2  2   81   80    25 0.050  -1.32
 4.01 Init - 203534 203475   60  2  0   74   95    59 0.442   6.46
 4.00 Prom - 204974 204935   40                              -5.16

 5.00 Prom + 206429 206468   40                              -5.26
 5.01 Init + 209291 209411  121  1  1   99   75   117 0.827  11.85
 5.02 Intr + 217060 217226  167  2  2   78  105     4 0.095   0.78
 5.03 Intr + 225519 225663  145  2  1   41   87    83 0.356   3.36
 5.04 Intr + 237064 237174  111  2  0   70   68    49 0.204   1.45
 5.05 Intr + 247132 247350  219  2  0   36   31   149 0.022   2.27
 5.06 Term + 254288 254292    5  0  2  132   43     0 0.028  -3.03
 5.07 PlyA + 256107 256112    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 172174 172100   75  1  0   61   97    34 0.882   2.69


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:72278388_72546623|GENSCAN_predicted_peptide_1|526_aa
MGLTAMERGQKTLGTVFQSTTWMPHEGFLRAGTPSALSNTPAVPRPGSESLEEEAGVEAK
VAFLCGIKGQAACLAWGKLTFPLDLKLGFGTNLGCATSGCDLGKSPGLGLGSRICISSKS
LCDADAVLQEQPLRTAILDAVLQEQPLKTAILGARPGVSSLVRPPESDCESWKQHRPAVL
SSCTATFSICAAQYSNHVAAEHVGKLRYREVKTFAQDDTATTTSLKEKQRRWLLSHIQGP
VLRKFAEVLPLKEKIRGHDCTSLFVPVRAPASTHGSCKGGPFCGQLVGPPSSEGNLQPCP
ECLSGTFDFSLMDVPVSASQAICKLWRWGGGLDTCWGSSDRKDKRTGSLSTSTSLNLPES
TCGAQDPTYQRRTPGSHSTTSASLLTNPIFAIMAHGSVTEGFHNSAFVGSLECLPCQGGR
TFLRRLPRWALRKSAGGSPSLQEMWNPQMQRADRALLWQPEQMKAVLMIIEAASACTSSP
GHPGVTCSLKLSVSKGEIEVMKVLSVTRGEEKLRAGESGMLESWGI

>gi568815595r:72278388_72546623|GENSCAN_predicted_CDS_1|1581_bp
atggggctgacggccatggagagagggcagaagacccttgggacagttttccagtccacc
acctggatgccccatgagggttttctcagagcagggacccccagtgccctttccaacacc
cctgctgtccccaggccgggctctgagtctttggaggaagaggctggggtggaagccaaa
gtcgcctttctctgtgggataaagggacaagctgcctgcctagcatgggggaagctgaca
ttcccactagacttgaagttaggctttggtactaatcttggctgtgccacttctggctgt
gaccttggcaagtctccaggtctggggctgggctcaagaatctgcatttccagcaagtcc
ttgtgtgatgctgatgctgtgctccaggagcaacctttgagaactgccatcctagatgct
gtgctccaggagcaacctttgaaaactgccatcctaggtgcaaggcctggggtgagctcc
ttggtccgtccacctgagagcgactgtgagagctggaagcagcaccgcccagcagtgctt
tcctcatgcacagccaccttctccatctgtgccgcccagtacagtaaccacgtggctgct
gagcacgtagggaaattgaggtacagagaagttaagacatttgcccaagatgacacagct
accaccacctccctcaaggagaagcagaggagatggctgctgagtcatatccagggccca
gtactcaggaaatttgctgaagtcttaccgttgaaagagaagataagaggacatgactgc
acctcactctttgtgcctgttagagccccagcatcaacacatgggagttgcaaaggtggt
cctttctgtggacagctggtgggacctcctagctcagaggggaacctccagccatgtccc
gagtgcttgtctggcaccttcgacttctccctcatggatgttcctgtttcagcatcgcag
gccatctgcaaactgtggagatggggtgggggcctggacacctgctggggtagcagtgat
agaaaggacaagaggacagggtccctcagcacttctacctccttgaacctgccagagtcc
acctgcggagctcaggatccaacatatcagaggaggactccaggaagtcattctaccacc
tctgcctccctgctgacgaatccgatatttgcgataatggcccatggcagcgtcacagag
ggttttcataacagcgcctttgtgggctcccttgaatgtctgccatgccaaggaggccgc
acattcctccggcggctgcctcgctgggctttgaggaaatctgctggcggcagccccagt
ttgcaggagatgtggaacccacagatgcagagggctgaccgtgctttgctatggcagcct
gagcaaatgaaagcagtgctaatgatcatagaggccgccagtgcctgcacttcttctcca
ggccaccctggagtcacctgcagcttgaagctctctgtgagtaagggggagatagaagtg
atgaaagtcctttctgttactagaggagaggagaagctccgtgcaggggaatccgggatg
ctggaaagctggggaatttaa

>gi568815595r:72278388_72546623|GENSCAN_predicted_peptide_2|93_aa
MGGDWIIGVDIPLAVLVIGLLLLEMQTPSRMAGPGMGAPVPQEDSEKRGEPSWGVGIPAS
AQQPTKVVPILPASTGHTRHHDTINGINSAGGR

>gi568815595r:72278388_72546623|GENSCAN_predicted_CDS_2|282_bp
atgggaggtgactggatcatcggggtggacatcccccttgctgttcttgtgataggcctg
ctgctgcttgagatgcaaactcccagcaggatggctggccctggaatgggagcacctgtt
ccccaagaggacagtgagaagaggggcgagcccagctggggtgttggcattcctgcctct
gctcagcagcccaccaaagtggtccccatcttgccggccagcacaggccacacgcgacac
cacgacacgattaatggcattaacagcgccggaggccgctga

>gi568815595r:72278388_72546623|GENSCAN_predicted_peptide_3|184_aa
MEEDNENERKPRINSQLVAQQVAQQYATPPPPKKEKKEKVEKQDKEKPEKDKEISPSVTK
KNTNKKTKPKSDILKDPPSEANSIQSANATTKTSETNHTSRPRLKNVDRSTAQQLAVTVG
NVTVIITDFKEKTRSSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSRSSTPKGDMSAVN
DESF

>gi568815595r:72278388_72546623|GENSCAN_predicted_CDS_3|555_bp
atggaggaagacaatgaaaatgaaagaaaacctcggatcaattctcagctggtggcacaa
caagtggcacaacagtatgccaccccaccaccccctaaaaaggagaagaaggagaaagtt
gaaaagcaggacaaagagaaacctgagaaagacaaggaaattagtcctagtgttaccaag
aaaaataccaacaagaaaaccaaaccaaagtctgacattctgaaagatcctcctagtgaa
gcaaacagcatacagtctgcaaatgctacaacaaagaccagcgaaacaaatcacacctca
aggccccggctgaaaaacgtggacaggagcactgcacagcagttggcagtaactgtgggc
aacgtcaccgtcattatcacagactttaaggaaaagactcgctcctcatcgacatcctca
tccacagtgacctccagtgcagggtcagaacagcagaaccagagcagctcggggtcagag
agcacagacaagggctcctcccgttcctccacgccaaagggcgacatgtcagcagtcaat
gatgaatctttctga

>gi568815595r:72278388_72546623|GENSCAN_predicted_peptide_4|287_aa
MAKDQMTVVTEGVTPTDQEKAIDQYQSMTWGLGTPVLEYRICSLSPKSHLCGCSNQGEPL
VAMAYIYPVSMLNDLVLQVPGVQCKTSELVNKGAKLMFGQGDELGSLTGPDREWGFGPAS
RPDAGTSEEANTKLRMAEEQRGAGERGPKVDLVGPWALQASRRCERSGPRLPSRPPQPHA
QVHKSARFLRPPRPFPGRRRHRLVCEAIRPGPGACRVPVGAPGSLPRSLFQSPERFLIIL
ITVTFIYQSTKETTYDLVVGQYDRELYLPFEGRIDIADVIGKILPFV

>gi568815595r:72278388_72546623|GENSCAN_predicted_CDS_4|864_bp
atggctaaggaccagatgacagtggtgaccgagggcgtaacccccactgaccaggagaag
gccatagaccagtaccagtctatgacctgggggttgggaacccctgtcttggagtacaga
atttgttcactgtcccccaaatctcatctgtgtggctgctccaaccaaggagaacctctg
gttgccatggcatacatttatccggtgagcatgcttaatgatctcgttctccaggtccct
ggagtacaatgtaagactagtgagcttgttaacaagggtgcaaagctgatgtttggtcaa
ggtgatgaacttgggtcactgacggggcctgacagggagtggggcttcgggccagcgtct
cggccggacgcagggacttcagaagaggcaaatacaaagctccgcatggcagaggaacag
aggggcgcgggggaacgcggtccaaaggtggaccttgtcggcccctgggcactgcaagcc
tcgaggcgctgcgagcgatccggcccgcggctcccctcccggcccccccagccccacgct
caagtccacaagtccgcccgcttcctgcgcccgccgcggcccttcccggggcgccgccgc
caccgcctggtgtgcgaggctatccggcccgggcccggggcttgcagggtgccagtgggg
gcgcccggttcccttcctcgctctctcttccagtccccggaaaggtttttgatcattctc
atcactgtcaccttcatctaccagtcaaccaaggaaaccacctatgacttagtggtaggc
cagtatgatagagaactatatttgccctttgagggtagaattgatattgctgatgtgatt
gggaaaatactgccattcgtctga

>gi568815595r:72278388_72546623|GENSCAN_predicted_peptide_5|255_aa
MAVATSLTAVAITKGGAADWPHLSDHMASFKDSCSWSLNAESSSSMYDILFNNYSLLNSN
GYCETHGRYSPAHRDLPFWWAKKGILKFHLQRIHPKADIKKAFPYESLFYQGGKPFPEAT
PPDFPSCPTDQEQAMYSSYKAGCEMSHTDIIIFQLSFHEKLGKLCRKKNKRASPSYHFLG
SSFWKHIPLLRETAAKAKDCVVAPNPLPSEPLLRLLGSAHRRHCRRRNECGFEVFAKCVT
HGKLPSYESLSFPIV

>gi568815595r:72278388_72546623|GENSCAN_predicted_CDS_5|768_bp
atggctgtggccaccagcctcacagcagtagccataacaaaaggaggagctgctgactgg
cctcatctcagtgaccacatggcatcattcaaagattcgtgctcctggtccctcaacgca
gagagcagttcctccatgtatgacattttatttaacaattattccttgttaaattccaac
ggatactgtgagacacatggcagatacagccctgcccacagggaccttccattctggtgg
gcaaagaaaggaatactgaaatttcatctacagagaatccaccccaaggcagacataaag
aaggctttcccctatgagtctctcttttatcaaggaggaaagcctttcccagaagcaact
ccaccagactttccttcgtgtccaactgaccaagaacaggccatgtactctagctacaag
gcaggctgcgaaatgagccatacagacattatcatcttccagctgtcctttcatgaaaaa
cttgggaagctctgcaggaaaaagaacaagagagcctctccttcgtaccattttcttggc
agctcattttggaaacatatccccttactgcgagaaacagcagccaaagcaaaggactgt
gtggttgctcccaatccccttccttctgagcctctgcttcggctgctgggttcagctcac
agaaggcactgtaggcgaaggaacgagtgtggctttgaggtctttgccaagtgcgtgacc
catggaaagttaccaagctatgagagcctcagtttccccattgtgtaa