GENSCAN 1.0	Date run:  5-Nov-116	Time: 21:03:46

Sequence gi568815594f:101690881_102173740 : 482860 bp : 35.87% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    516    511    6                               1.05
 1.05 Term -  13858  13692  167  2  2   23   47   181 0.281   4.60
 1.04 Intr -  19317  19248   70  0  1   22   83    53 0.017  -3.96
 1.03 Intr -  49763  49596  168  2  0   19   86   129 0.187   5.02
 1.02 Intr -  50841  50595  247  2  1   45   41   169 0.527   4.44
 1.01 Init -  52888  52749  140  1  2   71   44   151 0.604   8.66
 1.00 Prom -  60155  60116   40                              -3.85

 2.05 PlyA -  60206  60201    6                               1.05
 2.04 Term -  68901  68723  179  1  2    5   49   178 0.592   2.47
 2.03 Intr -  69294  69150  145  0  1    0   56   168 0.936   3.73
 2.02 Intr -  70803  70716   88  2  1   99   71    52 0.876   3.65
 2.01 Init -  88305  88166  140  0  2   74   94    92 0.208   8.06
 2.00 Prom -  97496  97457   40                              -6.85

 3.03 PlyA -  98284  98279    6                               1.05
 3.02 Term - 100380 100114  267  0  0  -52   41   242 0.041   0.01
 3.01 Init - 108158 107799  360  2  0   71   42   154 0.398   6.22
 3.00 Prom - 119568 119529   40                              -2.65

 4.00 Prom + 128245 128284   40                              -2.45
 4.01 Init + 138948 139326  379  2  1   36   67   148 0.231   4.61
 4.02 Intr + 164155 164309  155  2  2   37   78   139 0.371   6.67
 4.03 Intr + 171646 171784  139  0  1   76   82    95 0.927   6.82
 4.04 Intr + 179625 179764  140  1  2   59  111    78 0.601   6.46
 4.05 Intr + 190119 190244  126  2  0    8   67   104 0.129   0.26
 4.06 Intr + 204425 204530  106  1  1   25   82    72 0.035  -0.83
 4.07 Intr + 206598 206663   66  1  0   73   40    86 0.010   0.26
 4.08 Intr + 209126 209194   69  0  0   81  121    19 0.026   2.74
 4.09 Term + 216656 218097 1442  0  2   67   47   503 0.011  34.07
 4.10 PlyA + 220742 220747    6                               1.05

 5.00 Prom + 239396 239435   40                              -4.75
 5.01 Init + 249849 249953  105  2  0   89   80    58 0.921   5.37
 5.02 Term + 251427 251582  156  2  0   36   39   119 0.607  -1.25
 5.03 PlyA + 251639 251644    6                               1.05

 6.03 PlyA - 251958 251953    6                               1.05
 6.02 Term - 263290 263014  277  0  1   71   43   207 0.768   8.45
 6.01 Init - 267803 267742   62  2  2   55   99     6 0.393  -0.79
 6.00 Prom - 276401 276362   40                              -5.45

 7.00 Prom + 277387 277426   40                              -3.95
 7.01 Init + 297007 297169  163  0  1   71   35   129 0.168   5.84
 7.02 Intr + 334321 334629  309  2  0   43  111   206 0.426  13.76
 7.03 Intr + 339080 339385  306  0  0   45   86   322 0.521  23.20
 7.04 Intr + 352959 353027   69  1  0   83   74    56 0.164   1.94
 7.05 Intr + 354675 354991  317  1  2   25   86   145 0.067   2.86
 7.06 Intr + 359341 359428   88  0  1   95  110    42 0.459   5.72
 7.07 Intr + 369331 369509  179  2  2   98   90   189 0.997  18.82
 7.08 Intr + 372195 372258   64  2  1   47   92    77 0.477   1.37
 7.09 Intr + 380395 380424   30  2  0   91  103    15 0.240   0.48
 7.10 Intr + 383125 383170   46  2  1  111   34    52 0.028  -1.35
 7.11 Intr + 393411 393509   99  0  0   70   72    92 0.045   4.11
 7.12 Intr + 407140 407266  127  1  1   18   38   135 0.000   1.26
 7.13 Intr + 438357 438515  159  2  0   85   64    81 0.001   4.66
 7.14 Intr + 450350 450515  166  1  1   61  103    69 0.442   4.31
 7.15 Term + 478850 479025  176  0  2   99   47   112 0.872   5.14
 7.16 PlyA + 479287 479292    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 216427 218097 1671  0  0   51   47   542 0.947  41.31
S.002 Init + 477772 477835   64  0  1   79   29    85 0.935   3.06


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:101690881_102173740|GENSCAN_predicted_peptide_1|263_aa
MEKSLNDLMELKNMAQGLRDKCTSFSSSFDKLEERVSAIEDQMNEMKNTNYIREYYKHLY
ANKVENLEEMDKFLDTYTLPRLNQEEVESLNTPITGSEIEAIINSLPTKKSPGPDEFTAE
FYHRDKEELRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNVPCSRIGRINIVKM
AILPKGDGGIFHNTNKGDNRSRICGKHEANYKTTSGRSFRRHPEEGIVTTGDDSSMQVTA
PEDLPVRQDVEVEDSDTDDPDTV

>gi568815594f:101690881_102173740|GENSCAN_predicted_CDS_1|792_bp
atggagaagtccttaaatgacctgatggagctgaaaaacatggcacaaggactacgtgac
aaatgcacaagcttcagtagctcattcgataaactggaagaaagggtatcagcgattgaa
gatcaaatgaatgaaatgaaaaatacaaactacatcagagaatactataaacacctctat
gcaaataaagtagaaaacctagaagaaatggataaattcctggacacatacaccctccca
agactaaaccaggaagaagttgaatccctgaatacaccaataacaggctctgaaattgag
gcaataattaatagcctaccaaccaaaaaaagtccaggaccagatgaattcacagcggaa
ttctaccatagggacaaggaagagctgagaataaaatatctaggaatccaacttacaagg
gacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggac
acaaacaaatggaagaacgtcccatgctcacggataggaagaatcaatatcgtgaaaatg
gccatactgcccaagggagatggagggatctttcataataccaataaaggggacaatcga
tcaagaatttgtggaaaacatgaagctaactataaaacaacctcaggcaggtccttcagg
aggcatccagaagaaggcattgttaccacaggagatgacagctccatgcaagttactgcc
cctgaagaccttccagtgagacaagatgtggaggtggaagacagtgatactgatgatcct
gacactgtgtag

>gi568815594f:101690881_102173740|GENSCAN_predicted_peptide_2|183_aa
MGHQATMQFELPIINWVLSDPSIHKVRHAQQHYIIKWKWYIYDWYQAEACSLEKILTLLT
GCLEKEVGAVAGGMVQDTGWSLNVDAKQEHHTSLKDVDGRGTPMMLMIGYSSTVGSLAAP
TGSKVYLALSGSDDFTGYPAFDHEYPYLTSMILEAHQVVNIEANHPNVTRNCTYSVIPFS
GPG

>gi568815594f:101690881_102173740|GENSCAN_predicted_CDS_2|552_bp
atgggtcaccaagctaccatgcagtttgagctgcctatcataaactgggtgttatctgac
ccatcaatccataaagttcgccatgcacagcagcactacatcatcaagtggaagtggtat
atatacgattggtaccaagcggaggcttgtagcctggagaaaattctcaccctgctcacc
ggctgcctggaaaaggaagttggtgctgttgcaggaggcatggtccaagatactgggtgg
tcattaaatgtggatgcaaagcaggagcatcacacatcgctcaaagacgtggacggcagg
gggacaccaatgatgttgatgattggctattccagcacagtgggaagtttggcagcaccc
actggatccaaagtttatttggctctatctgggagtgacgatttcactgggtacccagca
tttgaccatgaatacccgtaccttacatccatgatcctggaggcccaccaggtggttaac
attgaggctaatcaccccaatgtaactcgtaactgcacctatagtgtcattcccttcagt
gggcctggttag

>gi568815594f:101690881_102173740|GENSCAN_predicted_peptide_3|208_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKSFTIYPSDKGL
ISRIYKELTQIYKKKSNNPIKKWAKDMNTHFSKEYIYAANRHMKKCSSSLAIREIQIKTT
KLQDPDPGAGESSSSSEVADTEGSPLARTPSALPPRGVQMPLREVRDRRTLWAAWRQDKK
EKPCLRDALASVPECSCLTMARGLRRAP

>gi568815594f:101690881_102173740|GENSCAN_predicted_CDS_3|627_bp
atgggcaaggacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctacagaatgggagaaaagttttacaatctacccatctgacaaagggcta
atatccagaatctacaaagaacttacacaaatttacaagaaaaaatcaaacaaccccatc
aaaaagtgggcaaaggatatgaacacacacttctcaaaagaatacatttatgcagccaac
agacacatgaaaaaatgctcatcatcattggccatcagagaaatacaaatcaaaaccaca
aaactacaggaccctgacccgggtgctggggaaagttccagctcctcagaagttgcagac
actgagggtagcccgctggccagaactcccagcgcgctccctcctcgtggcgtccagatg
cccctcagagaagtcagggacagaagaaccctctgggctgcctggcggcaggataaaaag
gagaagccctgtctcagggacgccctggcctcagtgcccgagtgcagttgtctaacgatg
gcccgtggtctccgcagagccccgtag

>gi568815594f:101690881_102173740|GENSCAN_predicted_peptide_4|873_aa
MIYEEDAEEWALYLTEVFLHVVKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLL
RDLTPKKCQFLEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVI
QSIIFKDSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENP
GEIFIILRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGI
VKATTKIKYYPTAKAKECLFRMADSGESLCQDIGLGKNFLTNIRQAQATKAKTDKYDNIE
LKSFCTAKETINKNSIEELDGVLTSIFKHEIPYYEFQSLQTEICSQNKYGELWMGYIGVP
ENMNLVQQGWAQFHYHNNTYSEIIEDPVIIDEKVLEVLARAIRQEKEIKGIQLGKEEVKL
SLFADDMIVYLENPIISAPNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESKIMSEL
PFTVTSKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKGKNIPCSWVGRISIVKIAI
LPKVIYRFNAIPIKLPMTFFTELEKTTLKVIWNQKRARIAKSILNQMNKAGGITLPDFKL
SYKATVTKTAWYWYQNRDIDQWNGTEPSEIRPHIYSHLIFDKPDKNKKWGKDSLFNKWCW
ENWPAICRKLKLDPFLIPYTKIKSRWIKDLNVRRKTIKTLEENLSNTIQDIGMGKDFMTK
TPKAMATKAKIDKWYLIKPKSFCTAKETTIRVNRQPTEWEKIFAIYSSDKRLISRIYNEL
KQIYKKKTNNPIKKWAKDMNRYFSKEEIYAANRHMRKCSSSLAIREIQIKTTIRYHLTPV
RMVIIKKSGNNRCWRGCGETGTLLHCWWDCKLV

>gi568815594f:101690881_102173740|GENSCAN_predicted_CDS_4|2622_bp
atgatatatgaagaagatgctgaggaatgggctctgtacttgacagaagtatttttacat
gttgtgaaaagggaagccatcctgttatatcgcttggagaatttctcttttcggcatttg
gagttgctgaacttaacgtcttacaaatgtaaacttttgatattatcaaatagcctgctt
agagacctaactccaaagaaatgtcagtttctggaaaagatacttcattcaccaaaaagt
gtagttactttgctttgtggagtgaagagttcagatcagctctatgaattactaaatatc
tctcaaagcagatgggagatctcaactgaacaggaacctgaagactacatctctgtaatc
cagagtatcatattcaaagattctgaagactactttgaggtcaacattccaacagaccta
cgagcaaaacattctggggaaataagtgagagaaaggaaattgaagaactatcagaagct
tcaagaaacaccataccactagcagtggtgcttcccactgaaattccatgtgagaatcct
ggtgaaatattcataattttgagagatgaagtaattggtgatactgtagaggttgaattt
acatcaagtaataagcgcattagaacacggccagccctttggaataagaaagtctggtgc
atgaaagctttagagtttcctgctggttcagtccatgtcaatgtctactgtgatggaatc
gttaaagctacaaccaaaattaagtactacccaacagcaaaggcaaaggaatgcctattc
agaatggcagattcaggagagagtttgtgccaggacattggtttgggcaaaaatttcttg
acaaatatccgacaagcacaggcaaccaaagcaaaaacggacaaatatgataatattgag
ttaaaaagtttctgcacagcaaaggaaacaatcaacaagaatagcattgaagaacttgat
ggtgtccttacatccatattcaaacatgagataccatattatgagttccagtctcttcaa
actgaaatttgttctcaaaacaaatatggagaactctggatgggttatatcggagtccct
gaaaatatgaatctggttcagcagggctgggcccaattccattaccataacaacacatat
tctgaaataatagaggaccctgtaattatagatgaaaaagtgttggaagttctggccagg
gcaatcaggcaggagaaagaaataaagggtattcaattaggaaaagaggaagtcaaattg
tccctgtttgcagatgacatgattgtatatttagaaaaccccatcatctcagccccaaat
ctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtgcaaaaa
tcacaagcattcttatacaccaataacagacaaacagagagcaaaatcatgagtgaactc
ccattcacagttacttcaaagagaataaaatacctaggaatccaacttacaagggatgtg
aaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggacacaaac
aaagggaagaacattccatgctcatgggtaggaagaatcagtatcgtgaaaatagccata
ctgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgactttcttc
acagaattggaaaaaactactttaaaggtcatatggaaccaaaaaagagcccgcattgcc
aagtcaatcctaaaccaaatgaacaaagccggaggcatcacactacctgacttcaaactg
tcctacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagac
caatggaacggaacagagccctcagaaataagaccacacatctacagccatctgatcttt
gacaaacctgacaaaaacaagaaatggggaaaggattccctatttaataaatggtgctgg
gaaaactggccagccatatgtagaaagctgaaactggatcccttccttataccttataca
aaaattaaatcaagatggattaaagacttaaatgtgagacgtaaaaccataaaaacccta
gaagaaaacctaagcaataccattcaggacataggcatgggcaaggacttcatgactaaa
acaccaaaagcaatggcaacaaaagccaaaattgacaaatggtatctaattaaaccaaag
agcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacagaatgggag
aaaatttttgcaatctactcatctgacaaacggttaatatccagaatctacaatgaactc
aaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggatatgaac
agatacttctcaaaagaagaaatttatgcagccaacagacacatgagaaaatgctcatca
tcactggccatcagagaaattcaaatcaaaaccacaataagataccatctcacaccagtt
agaatggtgatcattaaaaagtcaggaaacaacaggtgctggagaggatgtggagaaaca
ggaacacttttacactgttggtgggactgtaaactggtttga

>gi568815594f:101690881_102173740|GENSCAN_predicted_peptide_5|86_aa
MEVEDHSYHITSSHDISYQHNSSLLMDVSLDHLAEAAFFIDTVGNSSNKPQSTEPVVGIL
NLFFRESSRGPKSSVDDSMLRVELES

>gi568815594f:101690881_102173740|GENSCAN_predicted_CDS_5|261_bp
atggaggtggaggaccattcttatcacatcacatcatctcatgatatttcctatcaacat
aactcatcattgctgatggatgtttccctcgatcacctggctgaggcagccttcttcatc
gacacagtgggaaattcctctaataaaccacagagcacagagcctgtagtgggcatcttg
aacctgttcttcagagagagctctagaggcccaaagtcctctgtagacgattctatgtta
agagttgaactagaaagttag

>gi568815594f:101690881_102173740|GENSCAN_predicted_peptide_6|112_aa
MLSSSEFILRQGGHSRVITAREPCEDTDTEIHTGKTYCEDRGNAAGIQGMSRITGNHRKL
GERQGIDSSSGLQKEQTLQTHLDFRLLACSTMKKQISVAFSYPVCGNLLQQP

>gi568815594f:101690881_102173740|GENSCAN_predicted_CDS_6|339_bp
atgcttagctcatcagaattcattttgcggcaaggtggccatagtagagtgatcactgcc
agagagccttgtgaagacacggacacagagatacacacagggaaaacatattgtgaagac
cgaggcaatgcagctggaattcaaggaatgtcaagaattactggcaaccaccggaagcta
ggagagaggcaaggaatagattcttcctcgggtctccagaaagaacaaactctgcagaca
caccttgatttcagacttctagcctgcagtactatgaaaaaacaaatttctgttgctttt
agctacccagtttgtggtaatttgctacaacagccctag

>gi568815594f:101690881_102173740|GENSCAN_predicted_peptide_7|765_aa
MCVACGRKHEKPVQDSPHPLPTAEVIIEALVELKPESQNNHEEQRPGAHHSDTLTTQNPA
FHHESRKTYGQSADGAEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGA
DPENNSQEPLMSSRPPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQET
GDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAP
TPRPTSIPPKEETTPYIAQVFQQKTARRQSDDDKFCGLPKKQAQNLLKLISSFSKVSGYK
INVQKSQAFLYTNIRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEI
KEDTNKWKNISCSWVGRINIVKMAVLPKLNSCLQRGKNQVAADLYGLAVANKTMSLKDRA
RIESPAFSTLRGCLTDGQEELILLQEKVKNGKMSMDEALEKFKHWQMGKSGLEMIQQEKL
RQLRDCIIGKRPEEENVYNKLTIVHHPGGYYNETHESTDILLSGSSEKPLTGFNQKKSNL
SQNGEWTVESRVEESDQLQVLQPLDSGTCTNDFPRLLGLQQQTKGYAVGFPDFEAFGLGE
TVPHILASPVTASDQRGPRTAHTTTPESTYHKPRQLPCGIKSAYAQNARFKELLPMSVPA
FGCKPPVTLVLILWPASPKLSKMKAIDRQSHPSQGTPRTLDDLCVLGDLRITTTTSFQSV
GLWGSTNPHSSPRNITGWAHSSRSSFSLEALASSSGEPSCKMSLF

>gi568815594f:101690881_102173740|GENSCAN_predicted_CDS_7|2298_bp
atgtgcgttgcctgtgggagaaagcatgaaaagccagtgcaagattctccacatcccctt
cccactgcagaagtgatcatagaagcactggttgagctaaagcctgagtcccagaataac
catgaagagcagaggcctggtgcacatcacagtgacacattgaccacacagaacccagca
tttcatcatgaaagcaggaagacatacgggcagagtgcagatggagctgaggcaaatgaa
atggaaggggaaggaaaacagaatggatcaggcatggagaccaaacacagcccactagag
gttggcagtgagagttctgaagaccagtatgatgacttgtatgtgttcattcctggtgct
gatccagaaaataattcacaagagccactcatgagcagcagacctcctctccccccgccg
cgacctgtagctaatgccttccaactggaaagacctcacttcaccttaccagggacaatg
gtggaaggccaaatggaaagaagtcaaaactggggtcatcctggtgttagacaagaaaca
ggagatgaacccaaaggagaaaaagagaagaaagaagaggaaaaagagcaggaggaggaa
gaagacccatatacttttgctgagattgatgacagtgaatatgacatgatattggccaat
ctgagtataaagaaaaaaactgggagtcggtctttcattataaatagacctcctgccccc
acaccccgacccacaagtatacctccaaaagaggaaactacaccttacatagctcaagtg
tttcaacaaaagacagccagaagacaatctgatgatgacaagttctgtggtcttcctaag
aaacaagcccaaaatctccttaagctgataagcagcttcagcaaagtctcaggatacaaa
atcaatgtacaaaaatcacaagcattcttatacaccaacatcagacaaacagagagccaa
atcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaa
cttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaata
aaagaggatacaaacaaatggaagaacatttcatgctcatgggtaggaagaatcaatatc
gtgaaaatggccgtactgcccaagctgaattcttgcctccaaagaggcaagaatcaagtt
gctgcagatctgtacggattggctgttgctaacaaaaccatgtctttgaaggacagagct
cggatagagagtccagccttttctactctcaggggctgtctaactgatggtcaggaagaa
ctcatcctcctgcaggagaaagtaaagaatgggaaaatgtctatggatgaagctctggag
aaatttaaacactggcagatgggaaaaagtggcctggaaatgattcagcaggagaaatta
cgacaactacgagactgcattattgggaaaaggccagaagaagaaaatgtctataataaa
ctcaccattgtgcaccatccaggtggttattataatgaaactcacgaatctacggacatt
ttgctttcagggtctagtgagaagccattgactggttttaaccagaaaaagtcaaactta
tcgcagaatggagaatggactgtagagtcaagagtagaggaaagtgaccaactccaggtt
cttcagcctttggactctgggacttgcaccaatgacttccccaggctcttgggccttcag
cagcagactaaaggttatgctgttggcttccctgattttgaggcatttggacttggagaa
actgttcctcacatccttgcttctccagttacagcctcagatcaaaggggcccaagaaca
gctcacaccaccactccagagagcacataccataagcctcggcagcttccatgtggcatt
aagtctgcatatgctcagaatgcaagatttaaggagcttctacctatgtcagttcctgca
tttggatgcaagcctcccgttacacttgtgcttatcctctggccagcatctcctaaattg
tctaaaatgaaagcaattgatagacaaagccatccaagtcaagggacacctagaactcta
gatgacctttgtgtgcttggtgatctccgaataacaactacaacctcctttcagtccgtg
ggcctgtgggggtccaccaaccctcactccagtcccaggaacatcaccgggtgggcccac
tcttccagatctagcttctcactggaggcccttgcaagcagctcaggagagccatcctgt
aagatgtccctcttctga