GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:31:01

Sequence gi568815583f:63996014_64237615 : 241602 bp : 44.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1288   1283    6                               1.05
 1.03 Term -   2017   1905  113  2  2   97   33   115 0.966   5.62
 1.02 Intr -   4453   4359   95  0  2   85   85   -22 0.374  -3.19
 1.01 Init -   7486   7431   56  1  2  113   67    84 0.966   9.56
 1.00 Prom -  12137  12098   40                              -4.36

 2.00 Prom +  12159  12198   40                              -4.66
 2.01 Init +  19735  19821   87  0  0   94   80    35 0.578   3.94
 2.02 Intr +  21319  21535  217  0  1   95   56    37 0.611  -0.72
 2.03 Intr +  22231  22423  193  2  1   50  100    83 0.356   4.25
 2.04 Intr +  29080  29195  116  1  2   42  115    27 0.180   0.89
 2.05 Term +  34586  34677   92  0  2  113   49    53 0.198   1.78
 2.06 PlyA +  36647  36652    6                               1.05

 3.06 PlyA -  37423  37418    6                               1.05
 3.05 Term -  42405  42168  238  2  1   58   40   127 0.883   0.54
 3.04 Intr -  44254  44157   98  1  2  106   75   105 0.259   9.81
 3.03 Intr -  51134  51069   66  2  0  143   81   -12 0.001   2.70
 3.02 Intr -  64977  64709  269  1  2   25   40   227 0.018   8.85
 3.01 Init -  65138  65063   76  2  1   88   56   103 0.995   6.42
 3.00 Prom -  69411  69372   40                              -4.86

 4.06 PlyA -  73156  73151    6                               1.05
 4.05 Term -  77015  76918   98  0  2   89   44   113 0.835   5.13
 4.04 Intr -  79524  79479   46  0  1   89   98    40 0.708   3.08
 4.03 Intr -  85138  85089   50  2  2   63  116    -6 0.443  -1.90
 4.02 Intr -  92838  92674  165  1  0   30  111    86 0.704   5.03
 4.01 Init -  97755  97632  124  0  1   79   46   170 0.850  10.29
 4.00 Prom -  98883  98844   40                              -7.86

 5.00 Prom +  98945  98984   40                              -7.96
 5.01 Init + 100001 100159  159  1  0   81   72   127 0.566  10.49
 5.02 Intr + 116560 116689  130  0  1   82  -34   131 0.320   0.57
 5.03 Intr + 122104 122231  128  2  2   62   78    67 0.674   3.50
 5.04 Intr + 122775 122841   67  2  1   56   97    85 0.883   4.68
 5.05 Intr + 127490 127533   44  0  2  110  109     6 0.959   2.86
 5.06 Intr + 130066 130207  142  0  1   70   87    89 0.997   6.93
 5.07 Intr + 131161 131239   79  2  1   78  115    56 0.999   5.91
 5.08 Intr + 131718 131793   76  0  1   88   88    28 0.999   2.32
 5.09 Intr + 133903 134016  114  0  0   87   68   153 0.881  13.84
 5.10 Intr + 134215 134308   94  0  1   67   87   102 0.995   7.54
 5.11 Intr + 135674 135879  206  0  2  112   70   221 0.999  21.62
 5.12 Intr + 138651 138794  144  2  0   80  105   271 0.989  28.48
 5.13 Intr + 140317 140397   81  0  0  108   78    85 0.987   9.33
 5.14 Intr + 140848 140919   72  0  0   34   91    70 0.342   1.50
 5.15 Intr + 155903 156052  150  1  0   25   62   136 0.651   5.06
 5.16 Intr + 156230 156313   84  1  0   68   76   162 0.998  13.02
 5.17 Intr + 156625 156729  105  0  0   -3   85   100 0.665   1.01
 5.18 Intr + 157232 157326   95  1  2  107   74   109 0.997  10.16
 5.19 Intr + 157922 157989   68  2  2   73   94    43 0.998   1.95
 5.20 Term + 158374 158495  122  2  2   92   43   127 0.999   7.24
 5.21 PlyA + 158727 158732    6                               1.05

 6.15 PlyA - 159838 159833    6                               1.05
 6.14 Term - 160132 160010  123  1  0  120   49   336 0.998  31.28
 6.13 Intr - 160896 160712  185  1  2  136  101   319 0.999  37.51
 6.12 Intr - 164184 164091   94  0  1  118   76   108 0.978  12.14
 6.11 Intr - 166141 166028  114  1  0   70  107    87 0.998   9.44
 6.10 Intr - 167004 166839  166  2  1   75   63   311 0.944  27.26
 6.09 Intr - 167389 167249  141  0  0   71   -6   129 0.231   1.27
 6.08 Intr - 175578 175417  162  2  0   84   69    79 0.258   4.69
 6.07 Intr - 184441 184335  107  1  2  133   59   130 0.910  13.61
 6.06 Intr - 207176 207069  108  2  0  101   91    71 0.992   9.18
 6.05 Intr - 208576 208428  149  2  2   91   87   231 0.902  23.25
 6.04 Intr - 208936 208852   85  1  1  120   75    34 0.757   4.69
 6.03 Intr - 211581 211496   86  1  2  103   63   -23 0.240  -3.76
 6.02 Intr - 218111 217877  235  2  1  103   93   179 0.978  17.16
 6.01 Intr - 220700 220549  152  0  2  124  119   130 0.979  19.58

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  48921  49008   88  2  1   72   82    53 0.958   3.91


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:63996014_64237615|GENSCAN_predicted_peptide_1|87_aa
MGQQRSRRILVMLEALDALAYTLGKTRGFVEVSFAVDGDISGVWVWGQSPGGKTEAQSTK
DKILFVGVYHVLDAIVGTCVDQCMKSS

>gi568815583f:63996014_64237615|GENSCAN_predicted_CDS_1|264_bp
atgggtcagcaaagaagtaggcgaatcctggtgatgctggaagcattggatgccctagcc
tatactttagggaaaaccagaggctttgtagaggtctcttttgctgtagatggtgacatc
tcaggagtctgggtgtggggacaaagtccaggtgggaaaactgaagcccagagcaccaag
gataaaatcctatttgttggtgtttaccatgtgctggatgccattgtgggcacttgtgtg
gatcagtgcatgaaatcatcatag

>gi568815583f:63996014_64237615|GENSCAN_predicted_peptide_2|234_aa
MKMEAEIGVMCLQAKNTKDHQQPPDARRQGSCKDQIDNSQGRHRKRAKHHTKPHLHLKGC
PTLHRGGSAGPRTVTVRSQGACISLCLESRIPGHGQVHTLTGRQISSGGGRNQHLASPKG
CEDRTCEPKEATAASDSEISSTNPAKKLNSLKTLLLVVLINQVRRRGSQGHRQKENSRQL
GTSKRALDQDSEVIGLNPSSDTYQAPFTDKLFDPLPLLALNHPEPWAFTRIDDL

>gi568815583f:63996014_64237615|GENSCAN_predicted_CDS_2|705_bp
atgaagatggaggcagagattggagtgatgtgtctacaagccaagaacacaaaggatcac
cagcagccaccagacgctaggagacagggcagttgtaaagaccaaatagacaacagccaa
ggaaggcataggaagagagcaaagcaccacacgaagccccacctgcacctcaaaggctgt
ccaaccctccaccgaggtggctctgctgggcctaggacagtcacagtcaggtctcaaggt
gcttgcatctccctgtgcctagagagccgcattccaggacacgggcaggtccacacctta
acaggtagacagatctccagtggaggtggaagaaatcagcacttggccagtcccaagggc
tgtgaggacaggacctgtgagcccaaggaagcaactgctgcctcagactcagaaattagc
tctactaacccagcgaaaaagctaaacagccttaagactcttttactggttgttttaatc
aaccaggtacgaagaaggggatcccagggtcacagacagaaagaaaattctaggcaactt
ggtacttcaaagagagcactggaccaggattcagaagtcataggtttaaatcccagctca
gacacttaccaagccccttttactgacaaactctttgatcccctacccctactcgccctc
aaccaccctgagccctgggcctttactagaatagatgacctctga

>gi568815583f:63996014_64237615|GENSCAN_predicted_peptide_3|248_aa
MAGCRSRALPRGEAAKARREIKLSAGPASGSECGARRAHTHPELALARKYGPQVPPAAPV
PTRSPGSHPGLSLHTSSQAKGAGSGLSQPRKGLPQCSSGLKGSSSAAKVGTRAEEGFFGR
GQREEPIPKSSIREGVMDCMFQASMRSPNMEPFKQQKVEDFYDIGEELGRFFSCPWWHQQ
KDAILGNKPQPALPMMLDSVPSLGHVLHAGVCAEYCGYKDEQDETVSALLELHPGSYIHA
NKGILGLD

>gi568815583f:63996014_64237615|GENSCAN_predicted_CDS_3|747_bp
atggcgggctgcaggtcccgagccctgccccgtggggaggcagctaaggcccggcgagaa
atcaagctcagcgctgggccagccagcggctctgagtgcggggcccgccgagcccacacc
cacccggaactcgcgctggcccgcaagtacggcccgcaagtaccgcccgcagccccggtt
cccacccgcagccccggttcccacccgggcctctccctccacacctcctcgcaagctaag
ggagccggctctggcctcagccagcccaggaaggggctcccacagtgcagcagcgggctg
aagggctcctcaagtgccgccaaagtgggaacccgggcagaggagggattttttggcaga
gggcagagagaggaacccattcccaagtcctctattagagaaggcgtgatggattgtatg
ttccaggcctcaatgaggagtccaaacatggagccattcaagcagcagaaggtggaggac
ttttatgacatcggagaggagctggggaggttcttctcctgcccttggtggcaccagcag
aaagatgccattctcggcaacaaaccacagccagccctgccaatgatgcttgattcagtg
ccctcacttggccatgtcctgcatgcaggggtctgtgctgagtactgtgggtacaaagac
gagcaagatgagacagtctctgccctcctggagctccaccctggcagttacatacatgct
aacaagggcattcttggattggactag

>gi568815583f:63996014_64237615|GENSCAN_predicted_peptide_4|160_aa
MQRVSGLLSWTLSRVLWLSGLSEPGAARQPRIMEEKALEVYDLIRTIRDPEKPNTLEELE
VVSESCVEVQEINEEEYLVIIRFTPTVPHCSLATLIGLCLRVKLQRCLPFKHKLEIYISE
GTHSTEEDINKQINDKERVAAAMENPNLREIVEQCVLEPD

>gi568815583f:63996014_64237615|GENSCAN_predicted_CDS_4|483_bp
atgcagcgggtgtccgggctgctctcctggacgctgagcagagtcctgtggctctccggc
ctctctgagccgggagctgcccggcagccccggatcatggaagagaaagcgctagaagtt
tatgatttgattagaactatccgggacccagaaaagcccaatactttagaagaactggaa
gtggtctcggaaagttgtgtggaagttcaggagataaatgaagaagaatatctggttatt
atcaggttcacgccaacagtacctcattgctctttggcgactcttattgggctgtgctta
agagtaaaacttcagcgatgtttaccatttaaacataagttggaaatctacatttctgaa
ggaacccactcaacagaagaagacatcaataagcagataaatgacaaagagcgagtggca
gctgcaatggaaaaccccaacttacgggaaattgtggaacagtgtgtccttgaacctgac
tga

>gi568815583f:63996014_64237615|GENSCAN_predicted_peptide_5|719_aa
MASGGGGCSASERLPPPFPGLEPESEGAAGGSEPEAGDSDTEGEDIFTGAAVVSKHQSPK
ITTSLLPINNGSKENGIHEEQDQEPQDLFAGKFGLKNATVELSLDSTQNNQKKVLAKTLI
SLPPQEATNSSKPQPTYEELEEEEQEDQFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLP
LFRSKQFAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEF
LEKRRAALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDA
VSKMTIKMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAML
GSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRM
KTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVV
RKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQWGPGARAWVNERCGLDRRGKPCRGFGGR
LDLPASRTMVRALEGPQGSEGQVFRVEVLCSGRRHTVPRRYSEFHALHKRIKKLYKVPDF
PSKRLPNWRTRGLEQRRQGLEAYIQGILYLNQEVPKELLEFLRLRHFPTDPKASNWGSQQ
HQRPVLSFHVDPYVCNPSPESLPNVVVNGVLQGLYSFSISPDKAQPKAACHPAPLPPMP

>gi568815583f:63996014_64237615|GENSCAN_predicted_CDS_5|2160_bp
atggcgtcgggtggtggtggctgtagcgcttcggagagactgcctccgcccttccccggc
ctggagccggagtccgagggggcggccgggggatcagaacccgaggctggggacagcgac
accgagggggaggacattttcaccggcgccgcggtggtcagtaaacatcagtctccaaag
ataactacatcccttcttcccatcaacaatggctccaaagaaaatgggatccatgaagaa
caagaccaagagccacaggatctctttgcaggcaagtttggactcaaaaatgccacagtg
gagctatccttggacagcacacaaaataatcagaagaaggtgctagccaaaacactcatt
tctcttcctcctcaggaagccacaaattcttcgaagccccagccaacctatgaggagcta
gaggaagaagaacaggaggatcaatttgatttgacagtcggtataactgatcctgagaag
ataggggatggtatgaatgcatatgtagcctacaaagttacaacacagacaagcttacca
ttgttcagaagcaaacagtttgcagtaaaaagaagatttagtgactttctgggtctttat
gagaagctttccgagaagcactctcagaatggcttcattgtccctccgcccccggagaag
agcctcatagggatgacaaaagtgaaagttgggaaggaagattcttcttctgcagaattt
cttgaaaaacggagggccgctttagaaaggtaccttcagaggattgtaaatcatcctacc
atgttacaggaccctgacgtcagagagttcttggaaaaagaagagctgccacgtgccgtg
ggtacccagacattgagtggtgctggtctcctcaagatgttcaacaaagccacagatgcc
gtcagcaaaatgaccatcaagatgaatgaatcagacatttggtttgaggagaagctccag
gaggtagagtgtgaggagcagcgcttacggaaactgcatgctgttgtagaaactctagtc
aaccataggaaagagctagcgctgaacacagcccagtttgcaaagagtctagccatgctt
gggagctctgaggacaacacggcattgtcacgggcactctcccagctggctgaggtggaa
gaaaaaattgagcagctccaccaggaacaggccaacaatgacttcttcctccttgctgag
ctcctgagtgactacattcgcctcctggccatagtccgcgctgccttcgaccagcgcatg
aagacatggcagcgctggcaggatgcccaagccacactgcagaagaagcgggaggccgag
gctcggctgctgtgggccaacaagcctgataagctgcagcaggccaaggacgagatcctc
gagtgggagtctcgggtgactcaatatgaaagggacttcgagaggatttcaacagtggtc
cgaaaagaagtgatacggtttgagaaagagaaatccaaggacttcaagaaccacgtgatc
aagtaccttgagacactcctttactcacagcagcagtggggacccggggcccgggcctgg
gtgaacgagcgctgcgggctggaccgtcgggggaaaccttgtcgagggtttgggggccgc
ttggatttgccagcctcgcggaccatggttcgagctcttgagggaccccagggctccgag
gggcaggtgttccgagtggaggtgctgtgcagcgggcgcagacacacggtgccaaggcgc
tacagcgagttccacgcgctgcacaagcggatcaagaagctgtacaaagtgcccgacttc
ccctcgaaacgcctgcccaactggaggaccagagggttggaacagcgccggcagggcttg
gaggcttacatccagggcatcctgtacctgaaccaggaggtgcccaaggagttactggaa
ttcctgagacttcggcacttccccacagaccccaaggctagcaactggggctcccagcag
caccagcggcctgtcctgagcttccatgtggatccctatgtttgcaacccctccccagag
tcgctgcccaacgtggtggtgaatggtgtgctccagggcctctacagcttcagcatcagc
ccagataaagcccagccaaaggcggcctgtcaccctgctcctctgccaccgatgccctga

>gi568815583f:63996014_64237615|GENSCAN_predicted_peptide_6|635_aa
XEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHS
KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY
MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPIEA
LCENFPEEMATYLRYVRRLDFFEKPDYEYLRTLFTDLFEKKGYTFDYAYDWVGRPIPTPV
GSVHVDSGASAITRESHTHRDRPSQQQPLRNQVVSSTNGELNVDDPTGAHSNAPITAHAE
VEVVEEANLLLVFTPPSTLSSIKPSELKALSAEGDQEAGGKAKKVGGKWQTWAGEEPSPY
PRPTYLLTSSASYRRPVEQRSGRGGPRSMPGLVVFSEPGPVLCEAAFRRCPGCFRLRLWM
LRLSERNMKVLLAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVI
FGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGE
RFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRK
VESTKTDSRDKPLKDVIIADCGKIEVEKPFAIAKE

>gi568815583f:63996014_64237615|GENSCAN_predicted_CDS_6|1908_bp
ngtgaaggtctcccacaggtgtattactttggaccatgtgggaaatataatgccatggtg
ctggagctccttggccctagcttggaggacttgtttgacctctgtgaccgaacatttact
ttgaagacggtgttaatgatagccatccagctgctttctcgaatggaatacgtgcactca
aagaacctcatttaccgagatgtcaagccagagaacttcctgattggtcgacaaggcaat
aagaaagagcatgttatacacattatagactttggactggccaaggaatacattgacccc
gaaaccaaaaaacacataccttatagggaacacaaaagtttaactggaactgcaagatat
atgtctatcaacacgcatcttggcaaagagcaaagccggagagatgatttggaagcccta
ggccatatgttcatgtatttccttcgaggcagcctcccctggcaaggactcaaggctgac
acattaaaagagagatatcaaaaaattggtgacaccaaaaggaatactcccattgaagct
ctctgtgagaactttccagaggagatggcaacctaccttcgatatgtcaggcgactggac
ttctttgaaaaacctgattatgagtatttacggaccctcttcacagacctctttgaaaag
aaaggctacacctttgactatgcctatgattgggttgggagacctattcctactccagta
gggtcagttcacgtagattctggtgcatctgcaataactcgagaaagccacacacatagg
gatcggccatcacaacagcagcctcttcgaaatcaggtggttagctcaaccaatggagag
ctgaatgttgatgatcccacgggagcccactccaatgcaccaatcacagctcatgccgag
gtggaggtagtggaggaagctaatttactcctggtttttaccccaccctcaaccctctcc
agcataaaacctagtgagctaaaggctttgtctgcagaaggagatcaagaggctgggggt
aaggccaagaaggtaggaggaaaatggcagacctgggctggagaagaaccttctccgtat
cccaggcccacgtatttgctaacctcaagcgccagctaccgcaggccagtggaacagcgc
tccgggcggggcgggccgcggagcatgccggggcttgtggtcttctcggagcccgggccc
gtgctctgcgaggccgccttccgccgctgtccgggctgctttcgcctccgcctgtggatg
ctgcgcctctccgaacgcaacatgaaggtgctccttgccgccgccctcatcgcggggtcc
gtcttcttcctgctgctgccgggaccttctgcggccgatgagaagaagaaggggcccaaa
gtcaccgtcaaggtgtattttgacctacgaattggagatgaagatgtaggccgggtgatc
tttggtctcttcggaaagactgttccaaaaacagtggataattttgtggccttagctaca
ggagagaaaggatttggctacaaaaacagcaaattccatcgtgtaatcaaggacttcatg
atccagggcggagacttcaccaggggagatggcacaggaggaaagagcatctacggtgag
cgcttccccgatgagaacttcaaactgaagcactacgggcctggctgggtgagcatggcc
aacgcaggcaaagacaccaacggctcccagttcttcatcacgacagtcaagacagcctgg
ctagatggcaagcatgtggtgtttggcaaagttctagagggcatggaggtggtgcggaag
gtggagagcaccaagacagacagccgggataaacccctgaaggatgtgatcatcgcagac
tgcggcaagatcgaggtggagaagccctttgccatcgccaaggagtag