GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:35:16

Sequence gi568815592f:87377360_87611523 : 234164 bp : 38.68% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  15360  15483  124  2  1   93   94   101 0.896  11.58
 1.02 Intr +  19340  19453  114  0  0   81   40    62 0.304   0.20
 1.03 Intr +  20884  21018  135  2  0   83  109    65 0.958   7.72
 1.04 Intr +  30473  30730  258  0  0   47   76   108 0.158   2.01
 1.05 Intr +  30888  30961   74  1  2   67   18    70 0.289  -3.89
 1.06 Term +  31008  31268  261  2  0   48   42   359 0.691  21.84
 1.07 PlyA +  32178  32183    6                              -1.75

 2.00 Prom +  32218  32257   40                             -12.33
 2.01 Init +  32481  32588  108  2  0   80   95   123 0.999  12.47
 2.02 Intr +  33226  33309   84  0  0  114   55    89 0.963   7.30
 2.03 Intr +  34979  35061   83  1  2  119   44    51 0.209   1.32
 2.04 Intr +  38265  38515  251  0  2   -5   98   184 0.142   6.26
 2.05 Intr +  39310  39468  159  2  0   78   37   184 0.718  11.34
 2.06 Intr +  40849  41057  209  2  2   48   97   231 0.531  17.87
 2.07 Intr +  48532  48703  172  0  1   20   94    83 0.867   0.69
 2.08 Intr +  49022  49092   71  0  2   58   80    80 0.076   2.18
 2.09 Intr +  49167  49286  120  2  0   56   78    98 0.045   5.37
 2.10 Term +  86661  86891  231  2  0  114   32   182 0.912  10.69
 2.11 PlyA +  87082  87087    6                               1.05

 3.04 PlyA -  87108  87103    6                               1.05
 3.03 Term -  95587  95421  167  2  2   85   43   144 0.974   6.70
 3.02 Intr - 102658 101989  670  1  1   -5   89   248 0.682   5.94
 3.01 Init - 103471 103124  348  1  0   83   37   184 0.478  10.03
 3.00 Prom - 110337 110298   40                              -6.05

 4.00 Prom + 115127 115166   40                              -4.55
 4.01 Init + 123264 123308   45  2  0   92  111    21 0.772   5.65
 4.02 Intr + 123799 123951  153  0  0  113   83    36 0.957   4.95
 4.03 Intr + 129023 129089   67  1  1   64   99    45 0.918   0.76
 4.04 Intr + 131061 131237  177  1  0   91   84    54 0.702   4.27
 4.05 Intr + 131682 131816  135  1  0   16   44   136 0.516   1.62
 4.06 Term + 134040 134167  128  1  2  105   34    34 0.495  -2.84
 4.07 PlyA + 134255 134260    6                               1.05

 5.08 PlyA - 134968 134963    6                               1.05
 5.07 Term - 137140 137054   87  1  0  103   28    68 0.564  -1.02
 5.06 Intr - 137661 137598   64  2  1  101   71    41 0.527   1.50
 5.05 Intr - 141380 141271  110  2  2   86   94     4 0.272  -1.04
 5.04 Intr - 144227 144105  123  2  0   39  103    67 0.681   3.16
 5.03 Intr - 152289 152173  117  0  0   59   32    89 0.415   0.14
 5.02 Intr - 153583 153425  159  1  0   87   67   234 0.986  20.46
 5.01 Init - 164642 164559   84  2  0   48  100    74 0.954   5.47
 5.00 Prom - 165083 165044   40                              -3.35

 6.07 PlyA - 165641 165636    6                               1.05
 6.06 Term - 175833 175674  160  2  1  124   39    63 0.928   1.43
 6.05 Intr - 178146 178049   98  0  2   76   94    88 0.904   6.09
 6.04 Intr - 185426 185343   84  2  0   94  116     0 0.826   2.50
 6.03 Intr - 186873 186771  103  2  1   62  102   100 0.300   8.06
 6.02 Intr - 197988 197920   69  2  0  106   93    20 0.199   1.68
 6.01 Intr - 212929 212739  191  1  2   99   88   118 0.138  10.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  53674  53814  141  2  0   93   76    58 0.900   4.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:87377360_87611523|GENSCAN_predicted_peptide_1|321_aa
MKQCMYEEVPTGVCLRDEAKQQRSKQERLQQAGDMQSLHGGGVYLIIAEAGISFVCSQPH
LAIPVKPSQLSTPIVMPLVVFFQLPAPHPPTVLRPQLGLHPNPECDREKMSVRDHDPEVL
TRNSVLTTEVKMSLPEIPLFLKFFQPIFWGKDPQSGTPPHPHLAPPPLVRSLPSPWLRGG
GCERPTAPTVAVRAPGQKQTDTAPAVDSDPELEQRSIPAGGATPGLQGCPLAFARKPDLG
RLSNWRVGAGKVLSRVPSDPAAARMRTQIRSAHTDPERAHRSGARTQIRSAHTDPERAHR
SGARTQIRSAHTDPERDGLSH

>gi568815592f:87377360_87611523|GENSCAN_predicted_CDS_1|966_bp
atgaagcagtgtatgtatgaggaagtgcccacaggagtgtgcctccgggatgaagcaaag
caacagagatccaagcaggagaggctgcaacaggctggagatatgcagagtcttcatggg
ggaggtgtgtatctaataattgctgaagctggaatttccttcgtgtgcagtcagccacac
ctcgctatacctgtcaaaccatctcaattatccactccaattgtcatgcctctcgtggtg
ttcttccagctccctgccccacatccacccactgtcctcagacctcagctggggctgcac
cccaaccctgagtgtgacagagagaagatgagtgttagagatcatgatcctgaagtgctg
acgagaaattcagtcttaaccacggaggttaagatgtctctgcctgaaattcctttgttt
ttaaagtttttccagcccatcttttgggggaaagaccctcaaagtgggaccccgccccac
ccccacctggccccgccccctctggtccggagccttccatctccatggttacgcggcggt
ggctgcgagcgcccaactgctccgaccgtcgcggtgagggccccaggacagaagcagaca
gacacggctcctgctgtcgattccgatccagagctggaacagcggtccattcctgccgga
ggcgccaccccagggctgcagggctgccctctagcctttgcgcggaagccggacctcggg
agacttagtaattggagggtgggtgcagggaaggtgctgagccgcgtccctagcgacccg
gcagcggcgcgcatgcgcacacagatccggagcgcgcacacagatccggagcgcgcacac
agatccggagcgcgcacacagatccggagcgcgcacacagatccggagcgcgcacacaga
tccggagcgcgcacacagatccggagcgcgcacacagatccggagcgcgacggactctcc
cactga

>gi568815592f:87377360_87611523|GENSCAN_predicted_peptide_2|495_aa
MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQ
NLVKESRAGAQGDGLRVMLPSACQLQYIQPTDSYVRRILKIKYIEHCYLAILVEFLEEHH
RVLESRLGSVTREITDNRACAKEELESLYRKIISYVLLRSGLGSPTDIKTVREVTAALQS
VFPQAELGTFLTLSKKDKERQLKELTMIVTGIRLFNRDCGKGGEGIDDLPAVLHVAIPAT
MQHIDYQLETARSQVYRYTAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIILVP
SNQENNIVNLYSTSSSNSHCLVSHFNDELYDRVFKNIPCSVQGFWHPLNHMAYITGVEDL
AENRLPAVIEPTFRGCGEQSDIITGAQEVEMMTKQLGAHLEQLKMTIKSKIAVPTSQVFA
NLRQKVTHSVQTDLSHLRRENCSQVYPPKDTSTQSMREDSTGVPRPQIYLAGLRGGKSEI
TDEVKVNLTRDVDET

>gi568815592f:87377360_87611523|GENSCAN_predicted_CDS_2|1488_bp
atgcctccaactcaggccgaaagtgttataaggagtattatacgagaaataggacaagaa
tgtgcagcccatggagagattgtttctgaaactctgattgcttttatggtgaaagctgtt
gtcctggatccaagtaatggctttaacatggatagaaccctcatgaaaagtgatgtgcag
aatcttgttaaggaaagcagggctggtgctcagggagatgggttgagagtgatgctgcca
agtgcctgccagctgcagtatattcagcctacagattcttacgtaagaagaattctaaaa
attaaatatatagaacattgttatttggcaattttagtggaatttctcgaagaacatcac
cgggtcctagagtctagattaggctctgttacccgagaaattacagataacagagcatgt
gctaaagaagaattggaaagcctctaccggaagattatcagctatgtgttactccgctct
ggccttggatcccctacagacatcaagactgtcagagaggtaacagctgctctacagagt
gtttttcctcaggcagagcttgggacatttctaactctttctaagaaggacaaagaacgc
cagctgaaagaactcaccatgattgttactggaattcgtttatttaacagagactgtgga
aaaggaggagaaggcattgatgatttgccagctgttctccatgtagcaatcccagccacc
atgcagcatattgattaccagcttgagactgcccggagccaggtataccgctacacagcc
atccttgagaaggcagccaacgacccactcatgagggctgaacttcagccatatatgtta
aaagaagcgctatataatatacgacaatatgaggtcttccttcagatcattttggtccct
tcaaatcaagaaaacaatattgtaaacttgtactcaacctcatcttccaattcacattgc
cttgtgagtcatttcaatgatgaactctatgacagggtcttcaagaatatcccctgctca
gtacaaggattctggcatcccctaaaccacatggcatacatcacaggtgttgaggatctt
gcggagaacagacttcctgctgtcattgagcctactttcagaggatgtggggagcagtca
gatataattactggtgctcaagaagtggaaatgatgacaaaacagttaggagcccatctg
gaacaactaaaaatgaccataaaatcaaagatagcggtcccaacatcacaagtctttgct
aatttgcgccagaaagttactcactcagtacaaactgatcttagtcacttgagaagagaa
aattgttcccaagtgtaccctccaaaggacactagcacccagtccatgagggaagacagc
actggggtgcccaggcctcagatttacttggctggtcttcgtggaggaaagagcgaaatc
accgatgaggtcaaggtgaacttaactagagatgtggatgaaacctaa

>gi568815592f:87377360_87611523|GENSCAN_predicted_peptide_3|394_aa
MDHCSWIKPYQIKAKKSLVYLSFPSFPNTVPISITVPTTSNSNPTLERFYGLGAEVTGKD
PIGFFKMRFVLPALPPTTAPFTNLRNKTMPRLMPNDKSKVSVVEIGDLRQTIAIDRSSSY
ALVQLAIPFTLAFHQPEEGKIRHHKVREAPYRSFNSHVYLDAIGVPRGIPDQFKARNQIA
AGFESIFWWVTINKNIDWINYIYYNQQQFMNYTRDAVKGIAEQLGTNCQMAWENRIALDM
ILAERGGVCIMIKTECCAFIPNNTAPNGSITKALQGLTALSNELASSSGVNDPFTGWLEK
WFGKWKGITASILTSLTAVMGVLILVGCCVIPCICGLVQRHRGPPLVVIETKPLGLERLA
GLPVGHALKLGSGIQATPQNGENADRREAFPAAS

>gi568815592f:87377360_87611523|GENSCAN_predicted_CDS_3|1185_bp
atggaccattgttcctggatcaagccttaccaaattaaagctaagaaaagcttagtctat
ctatcttttccttcctttcctaacacagtgcctatatccattactgttcctaccactagc
aactctaaccccactttagagcgtttctatggtttaggagcagaagtcactggaaaggac
cctataggcttctttaagatgcgctttgttctccctgctctacctcctacaactgcccct
ttcacaaacctacgaaataaaactatgcctcgcctcatgccaaatgacaaaagcaaggtc
tcagtagtagaaataggagacctaaggcaaaccatagctattgacaggagcagtagttat
gctctagttcaattggctatcccttttactctggcatttcatcaaccagaggaaggaaaa
ataagacatcataaagtgagagaagctccttataggtcattcaactctcatgtctattta
gatgcaattggagtcccacggggaataccagatcaatttaaagcccgaaatcaaatagct
gcaggatttgagtcaatattttggtgggtcacaattaataaaaacatagattggataaac
tacatctattataaccaacagcaatttatgaactacactagagatgctgttaaaggaata
gctgagcaattagggactaactgccagatggcttgggaaaataggatagccttagacatg
atattagcagaaagaggaggagtttgcatcatgattaaaactgaatgttgtgccttcatc
ccaaacaacactgcccctaatggaagtataacaaaggcattgcaaggtctgactgctctg
tccaatgagttagccagcagctcaggggtaaatgacccctttacaggatggctagaaaag
tggttcggtaaatggaaaggaataacagcctcaattcttacttccctcacagctgtaatg
ggtgtacttattcttgtcgggtgctgtgtcataccatgcatctgtgggttggtgcagaga
caccggggaccgccccttgtggtcatagagacgaagccgctcggcctagagcgcctcgcc
ggcctcccggtcggccacgcactaaaactgggctcaggaatccaagctacaccccaaaat
ggggagaacgcggatcgaagggaggccttcccggccgcgtcctag

>gi568815592f:87377360_87611523|GENSCAN_predicted_peptide_4|234_aa
MAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQWVSVFMLCAGVTLVQWKPA
QATKVVVEQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSSDTSLWVRNIQMYLSGIIVTLA
GVYLSDGAEIKEKGFFYGYTYYVWFVIFLASVGGLYTSVVVKYTDNIMKGFSAAAAIVLS
TIASVMLFGLQITLTFALGTLLVCVSIYLYGLPRQDTTSIQQGETASKERVIGV

>gi568815592f:87377360_87611523|GENSCAN_predicted_CDS_4|705_bp
atggctttcctagctcttagcaatctggatgcagcagtgtaccaggtgacctaccagttg
aagattccgtgtactgctttatgcactgttttaatgttaaaccggacactcagcaaatta
cagtgggtttcagtttttatgctgtgtgctggagttacgcttgtacagtggaaaccagcc
caagctacaaaagtggtggtggaacaaaatccattattagggtttggcgctatagctatt
gctgtattgtgctcaggatttgcaggagtatattttgaaaaagttttaaagagttcagat
acttctctttgggtgagaaacattcaaatgtatctatcagggattattgtgacattagct
ggcgtctacttgtcagatggagctgaaattaaagaaaaaggatttttctatggttacaca
tattatgtctggtttgtcatctttcttgcaagtgttggtggcctctacacttctgttgtg
gttaagtacacagacaacatcatgaaaggcttttctgcagcagcggccattgtcctttcc
accattgcttcagtaatgctgtttggattacagataacactcacctttgccctgggtact
cttcttgtatgtgtttccatatatctctatggattacccagacaagacactacatccatc
caacaaggagaaacagcttcaaaggagagagttattggtgtgtga

>gi568815592f:87377360_87611523|GENSCAN_predicted_peptide_5|247_aa
MVGLLGTGFQLFGYEEKLQSNPLQHLFEVYVQVNKEAADDKSVAKAAQEFFQRLELGDVQ
ALSLWQKFRDLSIEEYIRVYKRLGVYFDEYSGESFYREKSQEVLKLLESKGLLLKTMYDQ
VRPIITRICLVTLGLWPLCFRDLAAAIDRMDKYNFDTMIYVDFKGLLLSDYKFSWDRVFQ
SRGDTGVFLQYTHARLHSHLAAVAHKTLQIKDSPPEVAGARLHLFKAVRSVLANGMKLLG
ITPVCRM

>gi568815592f:87377360_87611523|GENSCAN_predicted_CDS_5|744_bp
atggtaggtcttctgggaactggcttccagctgtttggctatgaggaaaaactgcagtcc
aatcctctacagcatctctttgaagtttatgtacaagttaataaagaagcagcagatgat
aaaagtgtagcaaaagcagcacaggagttcttccaacgattggaactgggcgatgtgcaa
gcactttcactgtggcaaaaatttcgggacttgagcattgaagagtacattcgggtttac
aagcgtctgggagtatattttgatgaatattcaggagaatcattttatcgtgaaaaatct
caagaggtcttaaagttgctggagagtaaaggactcctactgaaaacaatgtatgatcag
gtaagaccaattattacccggatctgcttagtaactcttggtttatggccactttgtttc
agagatcttgcagctgctatagatcgaatggacaagtataattttgatacaatgatatat
gtggacttcaaaggtttactcttatctgactacaagttcagctgggatcgtgttttccag
agtcgcggggacacaggagtcttcctacagtacacacacgcccgcctccacagtcatctt
gcagctgtggcacacaaaacactacaaataaaagatagtcctcctgaagtggctggggcc
agacttcatcttttcaaagctgtccgttctgtcctagccaatggaatgaaacttcttgga
ataacacctgtatgtaggatgtaa

>gi568815592f:87377360_87611523|GENSCAN_predicted_peptide_6|234_aa
PGKGCLRNLGFIPSSKGNEAAVEPQCASATTYLRHRGRSHGLTDSAYSRCTRDFPRALAA
AGQRNHLPNKLLACKSFSQALLLKKPREVADFQLSVDSLLEKDNDHSRPDIQVQAKRLAE
KLRCDTVVSEISTGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPQKKIVVE
FRVARPLYKGTQGSKIVKSSSLETGTASFLSLSADESKSQDHPRFKGRKIEYIS

>gi568815592f:87377360_87611523|GENSCAN_predicted_CDS_6|705_bp
ccagggaagggatgcctacgtaacctcggcttcatcccttcttcaaaggggaatgaggca
gcggtagagccacagtgcgcatcggccaccacataccttagacatcgaggacgtagccat
ggtcttactgactctgcgtattccagatgcactcgggatttcccgcgcgccctcgcggct
gcagggcagaggaaccatctcccaaataaactacttgcctgcaagtctttttctcaggcc
ctgcttttgaagaagccaagagaagtagctgattttcagctttctgtggattctttattg
gaaaaagacaatgaccattcaagaccagatattcaagttcaagccaagagactagcagag
aagctaagatgtgatacagtggtgagtgaaatcagtactggtcaaaggactgtaaatttc
aaaataaacagagagctcttaacaaagacagtgctacaacaagtaattgaagatggctca
aaatatggattaaaaagtgaacttttctctggacttccccagaagaagattgtggttgaa
ttcagggtagcaagacctctttacaaaggtactcaaggctctaagatagtgaaatcatct
agtcttgaaacaggcacagcatcatttttgtcactttctgctgatgaaagcaagtcacaa
gatcaccccagattcaagggaagaaaaatagagtacatctcttaa