GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:09:03

Sequence gi568815583f:48231516_48442075 : 210560 bp : 40.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1212   1323  112  2  1  101   83    60 0.962   5.83
 1.02 Intr +   3362   3489  128  0  2   76   94    59 0.583   4.78
 1.03 Intr +  10000  10084   85  0  1   62   97    56 0.316   2.37
 1.04 Intr +  10704  10847  144  1  0   95   50    48 0.606   1.03
 1.05 Term +  13238  13395  158  0  2   57   48   198 0.563   9.81
 1.06 PlyA +  14961  14966    6                               1.05

 2.00 Prom +  19530  19569   40                              -4.05
 2.01 Init +  20171  20255   85  1  1   63  110    95 0.906  10.37
 2.02 Intr +  24296  24395  100  0  1  102  103    89 0.998  10.05
 2.03 Intr +  27685  27796  112  1  1  116   83    80 0.768   9.76
 2.04 Intr +  36046  36186  141  0  0   76  110    48 0.445   5.43
 2.05 Intr +  38143  38249  107  0  2   67   98   103 0.952   7.29
 2.06 Intr +  43056  43138   83  0  2  121   95    77 0.887  10.06
 2.07 Intr +  53591  53734  144  0  0   50  116   217 0.988  20.03
 2.08 Intr +  56528  56659  132  0  0   70   83   137 0.565  11.10
 2.09 Intr +  56890  57001  112  2  1   79   75    57 0.724   2.02
 2.10 Intr +  60263  60349   87  2  0   80   64    57 0.344   0.67
 2.11 Intr +  67625  67760  136  2  1   39  116   167 0.730  14.25
 2.12 Intr +  69800  69867   68  1  2   63   95    82 0.731   3.18
 2.13 Intr +  82026  82165  140  0  2   57  109   107 0.897   8.89
 2.14 Term +  83521  83801  281  2  2    7   43   247 0.384   6.72
 2.15 PlyA +  84652  84657    6                               1.05

 3.00 Prom +  95577  95616   40                              -1.65
 3.01 Init + 100806 100891   86  2  2   90   99   138 0.980  13.45
 3.02 Intr + 102902 102993   92  2  2   59  106    97 0.997   7.32
 3.03 Intr + 104531 104575   45  0  0  133   75    37 0.950   4.36
 3.04 Intr + 109774 109848   75  2  0   90   95    83 0.990   7.77
 3.05 Intr + 110000 110070   71  0  2   37  108    77 0.966   2.58
 3.06 Term + 110507 110563   57  1  0  103   38    77 0.973   0.91
 3.07 PlyA + 111022 111027    6                               1.05

 4.08 PlyA - 111147 111142    6                               1.05
 4.07 Term - 115872 115749  124  2  1   28   47   130 0.359  -0.22
 4.06 Intr - 116357 116277   81  1  0   77   86    42 0.155   0.73
 4.05 Intr - 135326 135140  187  0  1   37   52   166 0.181   5.73
 4.04 Intr - 138182 137985  198  0  0   60   38   122 0.317   2.80
 4.03 Intr - 139840 139756   85  1  1   35   64    49 0.216  -4.33
 4.02 Intr - 141390 141217  174  0  0   33   47   152 0.576   4.81
 4.01 Init - 142764 142714   51  0  0   34   59   124 0.714   5.31
 4.00 Prom - 142924 142885   40                              -8.25

 5.00 Prom + 144380 144419   40                              -7.15
 5.01 Sngl + 145354 146016  663  0  0  100   32   341 0.877  25.62
 5.02 PlyA + 147173 147178    6                               1.05

 6.03 PlyA - 149088 149083    6                               1.05
 6.02 Term - 161414 161294  121  1  1   44   38   188 0.503   6.37
 6.01 Init - 167532 167477   56  0  2   61  116    50 0.404   5.91
 6.00 Prom - 174456 174417   40                              -4.75

 7.04 PlyA - 176207 176202    6                               1.05
 7.03 Term - 179864 179475  390  2  0  102   31   319 0.710  21.60
 7.02 Intr - 181228 181054  175  0  1   85   90   151 0.996  14.02
 7.01 Init - 184277 184021  257  2  2   67   98   307 0.534  26.35
 7.00 Prom - 186612 186573   40                              -3.35

 8.15 PlyA - 186861 186856    6                               1.05
 8.14 Term - 189291 189164  128  1  2   76   32   171 0.739   7.76
 8.13 Intr - 190171 190043  129  2  0   93   98    35 0.705   4.75
 8.12 Intr - 190553 190437  117  0  0  102   97    52 0.726   7.02
 8.11 Intr - 193976 193854  123  0  0   67   98    82 0.518   6.74
 8.10 Intr - 194349 194224  126  1  0   72   97    91 0.992   8.13
 8.09 Intr - 196258 196052  207  2  0   92   80   151 0.993  12.83
 8.08 Intr - 196956 196831  126  1  0   20   97   160 0.990   9.83
 8.07 Intr - 199287 199156  132  1  0   69   82   144 0.988  11.60
 8.06 Intr - 201473 201351  123  0  0  107  113   139 0.985  17.94
 8.05 Intr - 203198 203079  120  0  0   82   83   163 0.997  14.75
 8.04 Intr - 205562 205446  117  0  0   75   95   150 0.998  13.92
 8.03 Intr - 205872 205807   66  1  0   43   57   153 0.966   5.66
 8.02 Intr - 206402 206253  150  0  0   33   80   101 0.869   3.01
 8.01 Intr - 210331 210206  126  2  0   70  115    76 0.981   8.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583f:48231516_48442075|GENSCAN_predicted_peptide_1|208_aa
AQVILLVILLIAIANFFIGTVIPSNNEKKSRGFFNYQASIFAENFGPRFTKGEGFFSVFA
IFFPAATGILAGANISGDLEDPQDAIPRGTMLAIFITTVAYLGVAICVATPPPGWGLPHT
FSIVGKEEVSQHLEKKTIFYVQQGKQLQAGPPWKPKGACVVRDATGNMNDTIISGMNCNG
SAACGLGYDFSRCRHEPCQYGLMNNFQV

>gi568815583f:48231516_48442075|GENSCAN_predicted_CDS_1|627_bp
gcccaagtcattcttctggtcattcttctaattgctattgcaaacttcttcattggaact
gtcattccatccaacaatgagaaaaagtccagaggtttctttaattaccaagcatcaata
tttgcagaaaactttgggccacgcttcacaaagggtgaaggcttcttctctgtctttgcc
atttttttcccagcagctactgggattcttgctggtgccaatatctcaggagatttggag
gatccccaagatgccatccccagaggaaccatgctggccattttcatcaccactgttgcc
tacttaggggttgcaatttgtgtagccacacctcctcctggttgggggttgcctcatact
ttttccatagtaggaaaggaagaggtttcccaacatttagagaagaaaaccatcttctat
gtacaacagggaaaacagctccaggctggaccaccatggaagccaaagggggcctgtgtg
gtccgagatgccaccgggaacatgaatgacaccatcatttctgggatgaactgcaatggt
tcagcagcatgtgggttgggctatgacttctcaagatgtcgacatgaaccatgtcagtac
gggctgatgaacaatttccaggtttga

>gi568815583f:48231516_48442075|GENSCAN_predicted_peptide_2|575_aa
MFVINWWAAVITYVIEFFLYVYVTCKKPDVNWGSSTQALSYVSALDNALELTTVEDHVKN
FRPQCIVLTGGPMTRPALLDITHAFTKNSGLCICCEVFVGPRKLCVKEMNSGMAKKQAWL
IKNKIKAFYAAVAADCFRDGVRSLLQASGLGRMKPNTLVIGYKKNWRKAPLTEIENYVGI
IHDAFDFEIGVVIVRISQGFDISQVLQVQEELERLEQERLALEATIKDNECEEESGGIRG
LFKKAGKLNITKTTPKKDGSINTSQSMHVGEFNQKLVEASTQFKKKQEKGTIDVWWLFDD
GGLTLLIPYILTLRKKWKDCKLRIYVGGKINRIEEEKIVMASLLSKFRIKFADIHIIGDI
NIRPNKESWKVFEEMIEPYRLHESCKDLTTAEKLKRETPWKITDAELEAVKEKSYRQVRL
NELLQEHSRAANLIVLPWKSHCPYKSLQGPTPAPHPPISATSTPTTVYAFLCHCSDHTGL
LTVKGLDRQENKLHIIITNCEKYCEGNKEKVLRQDNSVDLDALCGRELERLLSLSPLSAT
PPKREPASKRVQQPETTLELAHYSSLAGARSVQAL

>gi568815583f:48231516_48442075|GENSCAN_predicted_CDS_2|1728_bp
atgtttgtcatcaactggtgggcagctgtcatcacctatgtcattgaattcttcctttac
gtctatgtgacttgtaagaagccagatgtgaactggggctcctccacacaggctctttcc
tacgtgagtgctttagacaatgctctggaattaaccacagtggaagaccacgtaaaaaac
ttcaggccccagtgcattgtcttaacagggggacccatgacaagacctgctctcctggac
ataactcacgcctttaccaagaacagtggcctttgcatctgctgtgaagtctttgtggga
ccgcgcaaactgtgtgttaaggagatgaacagtggcatggcgaaaaaacaggcctggctt
ataaagaacaaaatcaaggctttttatgctgcagtggcggcagactgtttcagggatggt
gtccgaagtcttcttcaggcctcaggcttaggaagaatgaaaccaaacactctggtgatt
ggatataagaaaaactggaggaaagctcccttgacagagattgagaactacgtgggaatc
atacatgatgcatttgattttgagattggcgtggttatagtcagaatcagccaaggattt
gacatctctcaggttcttcaggtgcaagaggaattagagagattagaacaggagagacta
gcattggaagcgactatcaaagataatgagtgtgaagaggaaagtggaggcatccgaggc
ttgtttaaaaaagctggcaagttgaacattactaagacaacgcctaaaaaagatggcagc
attaacacaagccagtcgatgcatgtgggagagttcaaccagaaactggtggaagccagc
actcaatttaaaaagaaacaagaaaaaggcacaattgatgtttggtggttgtttgatgat
ggagggttaacacttcttatcccctatatcttaactctcagaaaaaaatggaaagactgt
aaattaagaatctatgtgggagggaagatcaaccgcattgaagaagaaaaaattgtaatg
gcttcccttctgagcaaatttaggataaaatttgcagacatccatatcatcggtgacatc
aacattaggccaaacaaagagagctggaaagtctttgaagagatgattgaaccatatcgt
ctccatgaaagctgcaaagatttaacaactgctgagaaattaaaaagagaaactccgtgg
aaaattacagatgcagaactggaagcagtcaaggaaaagagttaccgccaagttcgactg
aatgaactcttacaggagcactccagagctgctaatctcattgtccttccatggaaaagc
cactgtccttacaagagcttacaaggccctacccctgcaccccatccacctatttctgcg
acttcaacacctacaactgtgtacgccttcctctgtcactgttcagaccacactggcctt
cttacagttaaaggtttagacagacaagaaaacaagttacacataataattacaaattgt
gaaaaatactgtgaaggaaataaagagaaagtgttgagacaggataactctgttgacctt
gatgccctttgtgggcgggaactggagaggctcctttcactcagcccactgtcggccact
cctcccaaaagagagcctgcgagcaagcgagtgcagcaaccggagacaacactggaactg
gcccattactcctctctggcaggagcacgctctgtgcaggccctatag

>gi568815583f:48231516_48442075|GENSCAN_predicted_peptide_3|141_aa
MQLRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVA
PRSGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIE
EVQALDDTERGSGGFGSTGKN

>gi568815583f:48231516_48442075|GENSCAN_predicted_CDS_3|426_bp
atgcagctccgctttgcccggctctccgagcacgccacggcccccacccggggctccgcg
cgcgccgcgggctacgacctgtacagtgcctatgattacacaataccacctatggagaaa
gctgttgtgaaaacggacattcagatagcgctcccttctgggtgttatggaagagtggct
ccacggtcaggcttggctgcaaaacactttattgatgtaggagctggtgtcatagatgaa
gattatagaggaaatgttggtgttgtactgtttaattttggcaaagaaaagtttgaagtc
aaaaaaggtgatcgaattgcacagctcatttgcgaacggattttttatccagaaatagaa
gaagttcaagccttggatgacaccgaaaggggttcaggaggttttggttccactggaaag
aattaa

>gi568815583f:48231516_48442075|GENSCAN_predicted_peptide_4|299_aa
MNRKVTLGVDRGLDAERVLGQTPYAGCQQIHHFPGAAKSLSLAIIFCSMTLHQGRCPSPL
NLLLAYTEICDSTSQVRLWDRVMISNKNRCRLKFDIKMTTFKPAVFPYCQNESSDVLWQF
DSTSQIFLKVTPKTTLRRGGEHNLVGVEGCGRGEKESEEMKRERLLRQLAGSFTKQILAH
DMITKETAVGWILSVGSSEASVEQTRSDKKGASFKEPCSLAIANENNKAMVWMLLALEPG
LALLAPQLADNLLWNLVIVTCKCDLIGNMGLADVIKMRSYYIEEEGNMDTYTERHREDA

>gi568815583f:48231516_48442075|GENSCAN_predicted_CDS_4|900_bp
atgaacagaaaagtgacactgggtgtggaccgaggactggatgccgaaagggtgcttggt
caaacaccctatgctggttgtcaacaaattcatcattttcccggtgctgccaaaagtctg
agtttggcgatcatcttctgctctatgacacttcaccaggggagatgtccatctccctta
aatctcctgctagcatacactgagatttgtgactctacatcacaggtcaggctctgggac
cgggtaatgattagcaacaagaacagatgcaggctgaaatttgatataaaaatgactaca
tttaagccagctgtattcccatattgtcagaatgagagctcagatgttttatggcaattt
gactccactagtcagatcttcctaaaggttactcctaaaaccacgttaaggagaggtgga
gagcacaacctggtaggagtggagggttgtgggagaggagaaaaagagagtgaagagatg
aaaagagagagattgctgagacaactagctggatcttttacaaaacaaatcctggcccac
gacatgattaccaaggagacagctgtggggtggatcttgagtgtaggctcatctgaggcc
agtgtcgagcagacaaggtcagacaaaaagggtgcatcttttaaagagccttgctcatta
gccattgctaatgagaacaacaaagccatggtgtggatgcttcttgccctagaacccgga
ttggctctccttgctcctcagcttgcagacaacctattgtggaaccttgtgatcgttact
tgtaaatgtgatcttattggaaatatgggcttggcagatgtaatcaagatgaggtcatac
tacattgaggaagagggaaatatggacacatatacagagagacacagagaggatgcctag

>gi568815583f:48231516_48442075|GENSCAN_predicted_peptide_5|220_aa
MAERGQCRAQAMASEGGSSKPWQLPCGVEPVSARKSRIEVLEPLPRFQKMYGNTWMPRQK
FAIGVVSSWKTSARAMQKGNVGWEPPHRVPTGAPPSRTVRGGPPSSRPQNDRSTDSLHCA
PGKTSDTQHQPVKVARREAVPCKATGVELPKTLGTHLLHQCDLDVRHGVKGDHFEALGFD
CPAGFGTCMGPLAPLFWPISPIWNGCIYPMPVPPLYPGSN

>gi568815583f:48231516_48442075|GENSCAN_predicted_CDS_5|663_bp
atggctgaaaggggccaatgtagagctcaggccatggcttcggagggtggaagctccaag
ccctggcagcttccatgtggtgttgagcctgtgagtgcacggaagtcaagaattgaggtt
ttggaacctctgcctagatttcagaagatgtatggaaacacttggatgcccaggcagaag
tttgctataggggtggtgtcctcatggaaaacctctgctagggcaatgcagaagggaaat
gtggggtgggagcccccacacagagtccctactggggcaccacctagtagaactgtgaga
ggagggccaccatcctccagaccccagaatgatagatccactgacagcttgcactgtgca
cctggaaaaacttcagacactcaacaccagccagtgaaggtagcaaggagggaggctgta
ccctgcaaagccacaggggtggagctgcccaagactctaggaacccacctcttgcatcag
tgcgacctggatgtgagacacggagtcaaaggagatcattttgaagctttaggatttgac
tgtcctgctggatttgggacttgcatggggcctctagcccctttgttttggccaatttct
cccatttggaatggctgtatttacccaatgcctgtacccccattgtatccaggaagtaac
taa

>gi568815583f:48231516_48442075|GENSCAN_predicted_peptide_6|58_aa
MKKTFLAEKNQSKHAELGRSTGDPNIPGEGEEQLQEYQDRLCGKQKLTEERKEMRRPD

>gi568815583f:48231516_48442075|GENSCAN_predicted_CDS_6|177_bp
atgaagaagacatttctggctgagaagaaccagagtaaacatgcagaattgggaagatcc
acaggagacccgaacatccccggagagggcgaagagcagctacaggagtaccaggaccgt
ttgtgtgggaagcagaagttgacggaagagagaaaggagatgagaaggcctgattga

>gi568815583f:48231516_48442075|GENSCAN_predicted_peptide_7|273_aa
MPLLILPADENECLSAHICGGASCHNTLGSYKCMCPAGFQYEQFSGGCQDINECGSAQAP
CSYGCSNTEGGYLCGCPPGYFRIGQGHCVSGMGMGRGNPEPPVSGEMDDNSLSPEACYEC
KINGYPKRGRKRRSTNETDASNIEDQSETEANVSLASWDVEKTAIFAFNISHVSNKVRIL
ELLPALTTLTNHNRYLIESGNEDGFFKINQKEGISYLHFTKKKPVAGTYSLQISSTPLYK
KKELNQLEDKYDKDYLSGELGDNLKMKIQVLLH

>gi568815583f:48231516_48442075|GENSCAN_predicted_CDS_7|822_bp
atgccgcttcttattttgcctgcagatgaaaacgaatgcctcagcgctcacatctgcgga
ggagcctcctgtcacaacaccctggggagctacaagtgcatgtgtcccgccggcttccag
tatgaacagttcagtggaggatgccaagacatcaatgaatgtggctctgcgcaggccccc
tgcagctatggctgttccaataccgagggcggttacctgtgtggctgtccacctggttac
ttccgcataggccaagggcactgtgtttctggaatgggcatgggccgaggaaacccagag
ccacctgtcagtggtgaaatggatgacaattcactctccccagaggcttgttacgagtgt
aagatcaatggctaccccaaacggggcaggaaacggagaagcacaaacgaaactgatgcc
tccaatatcgaggatcagtctgagacagaagccaatgtgagtcttgcaagttgggatgtt
gagaagacagccatctttgctttcaatatttcccacgtcagtaacaaggttcgaatccta
gaactccttccagctcttacaactctgacgaatcacaacagatacttgatcgaatctgga
aatgaagatggcttctttaaaatcaaccaaaaggaagggatcagctacctccacttcaca
aagaagaagccagtggctggaacctattcattacaaatcagtagtactccactttataaa
aagaaagaacttaaccaactagaagacaaatatgacaaagactacctcagtggtgaactg
ggtgataatctgaagatgaaaatccaggttttgcttcattaa

>gi568815583f:48231516_48442075|GENSCAN_predicted_peptide_8|596_aa
XIDECVEEPEICALGTCSNTEGSFKCLCPEGFSLSSSGRRCQDLRMSYCYAKFEGGKCSS
PKSRNHSKQECCCALKGEGWGDPCELCPTEPDEAFRQICPYGSGIIVGPDDSAVDMDECK
EPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTC
EEGFEPGPMMTCEDINECAQNPLLCAFRCVNTYGSYECKCPVGYVLREDRRMCKDEDECE
EGKHDCTEKQMECKNLIGTYMCICGPGYQRRPDGEGCVDENECQTKPGICENGRCLNTRG
SYTCECNDGFTASPNQDECLDNREGYCFTEVLQNMCQIGSSNRNPVTKSECCCDGGRGWG
PHCEICPFQGTVAFKKLCPHGRGFMTNGADIDECKVIHDVCRNGECVNDRGSYHCICKTG
YTPDITGTSCVDLNECNQAPKPCNFICKNTEGSYQCSCPKGYILQEDGRSCKDLDECATK
QHNCQFLCVNTIGGFTCKCPPGFTQHHTSCIDNNECTSDINLCGSKGICQNTPGSFTCEC
QRGFSLDQTGSSCEDVDECEGNHRCQHGCQNIIGGYRCSCPQGYLQHYQWNQCVGK

>gi568815583f:48231516_48442075|GENSCAN_predicted_CDS_8|1791_bp
natattgatgagtgtgtcgaagagccagaaatttgtgccctgggcacatgcagtaacact
gaaggcagcttcaaatgtctgtgtccagaagggttttccttgtcctccagtggaagaagg
tgccaagatttgcgaatgagctactgttatgcgaagtttgaaggaggaaagtgttcatca
cccaaatccagaaatcactccaagcaggaatgctgctgtgccttgaagggagaaggctgg
ggagacccctgcgagctctgccccacggaacctgatgaggccttccgccagatatgtcct
tatggaagtgggatcatcgtgggacctgatgattcagcagttgatatggacgaatgcaaa
gaacccgatgtctgtaaacatggacagtgcatcaatacagatggttcctatcgctgcgag
tgtccctttggttatattctagcagggaatgaatgtgtagatactgatgaatgttctgtt
ggcaatccttgtggaaatggaacctgcaagaatgtgattggaggttttgaatgcacctgc
gaggagggatttgagcccggtccaatgatgacatgtgaagatataaatgaatgtgcccag
aatcctctgctctgtgccttccgatgtgtgaacacttatgggtcatatgaatgcaaatgt
cccgtgggatatgtgctcagagaagaccgtaggatgtgcaaagatgaggatgagtgtgaa
gagggaaaacatgactgtactgaaaaacaaatggaatgcaagaacctcattggcacatat
atgtgcatctgtggacccgggtatcagcggagacctgatggagaaggctgtgtagatgag
aatgaatgtcagacgaagccagggatctgtgagaatgggcgctgcctcaacacccgtggg
agctacacctgtgagtgtaatgatgggtttaccgccagccccaaccaggacgagtgcctt
gacaatcgggaagggtactgcttcacagaggtgctacaaaacatgtgtcagatcggctcc
agcaacaggaaccccgtcaccaaatcggaatgctgctgtgacggagggagaggctggggt
ccccactgtgagatctgccctttccaggggactgtggctttcaagaaactctgtccccat
ggccgaggattcatgaccaatggagcagatatcgatgaatgcaaggttattcacgatgtt
tgccgaaatggggaatgtgtcaatgacagaggatcatatcattgcatttgtaaaactggg
tacactccagatataactgggacttcctgtgtagatctgaacgagtgcaaccaggctccc
aaaccctgcaattttatctgcaaaaacacagaagggagttaccagtgttcatgcccgaaa
ggctacattctgcaagaggatggaaggagctgcaaagatcttgatgagtgtgcaaccaag
caacacaactgccagttcctatgtgttaacaccattggcggcttcacatgcaaatgtcct
cccggatttacccaacaccatacgtcctgcattgataacaatgaatgcacctctgacatc
aatctgtgcgggtctaagggcatttgccagaacactcctggaagcttcacctgtgaatgc
cagcggggattctcacttgatcagaccggctccagctgtgaagacgtggacgagtgtgag
ggtaaccaccgctgccagcatggctgccagaacatcattgggggctacaggtgcagctgc
ccccagggctacctccagcactaccagtggaaccagtgtgttggcaagtaa