GENSCAN 1.0	Date run:  4-Nov-116	Time: 10:24:30

Sequence gi568815589f:33165079_33380856 : 215778 bp : 44.93% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   1142   1137    6                               1.05
 1.01 Sngl -   2091   1549  543  0  0   84   35   552 0.945  43.60
 1.00 Prom -   6503   6464   40                              -8.86

 2.00 Prom +  11966  12005   40                              -3.36
 2.01 Init +  12362  12391   30  1  0   59  111    -8 0.653  -1.80
 2.02 Term +  14247  14339   93  2  0   87   55   140 0.923   8.43
 2.03 PlyA +  14885  14890    6                               1.05

 3.03 PlyA -  17760  17755    6                               1.05
 3.02 Term -  22181  22029  153  2  0  109   36    47 0.323  -0.48
 3.01 Init -  24513  24259  255  0  0   67   92    85 0.447   4.06
 3.00 Prom -  27152  27113   40                              -1.86

 4.04 PlyA -  30004  29999    6                               1.05
 4.03 Term -  37406  37317   90  2  0  103   44    63 0.307   1.12
 4.02 Intr -  53626  53534   93  1  0   23   67   106 0.188   2.16
 4.01 Init -  56564  56505   60  2  0   62  111     9 0.349   1.85
 4.00 Prom -  61828  61789   40                              -3.86

 5.00 Prom +  63809  63848   40                              -4.86
 5.01 Init +  75131  75191   61  1  1   90   84   137 0.716  13.05
 5.02 Intr +  80034  80074   41  1  2  113   91   -10 0.799  -0.26
 5.03 Intr +  81538  81650  113  0  2  131   95    57 0.927   9.88
 5.04 Term +  83348  83393   46  2  1   77   42    81 0.852  -0.92
 5.05 PlyA +  83467  83472    6                               1.05

 6.10 PlyA -  87413  87408    6                               1.05
 6.09 Term -  90230  90141   90  2  0   96   51   123 0.979   7.12
 6.08 Intr -  90849  90787   63  0  0   85  109    -1 0.583   0.61
 6.07 Intr -  91830  91723  108  0  0   95  119   131 0.998  17.38
 6.06 Intr -  93955  93842  114  1  0   64   93   117 0.999  10.44
 6.05 Intr -  96091  96009   83  2  2  105   94    51 0.992   6.76
 6.04 Intr -  97752  97624  129  1  0  105   98    74 0.999  10.77
 6.03 Intr -  98308  98159  150  2  0   53   86    44 0.613   0.83
 6.02 Intr -  99517  99146  372  2  0   44   79   354 0.257  25.13
 6.01 Init - 100062  99915  148  0  1   48   11   140 0.222   0.56
 6.00 Prom - 103499 103460   40                              -6.76

 7.00 Prom + 104049 104088   40                              -7.66
 7.01 Init + 105588 105638   51  2  0   78   30    75 0.425   1.86
 7.02 Intr + 106074 106145   72  2  0  102   78    96 0.972   9.60
 7.03 Intr + 111378 111486  109  2  1   46  111   165 0.939  14.46
 7.04 Intr + 113035 113226  192  2  0   66   61    98 0.568   4.36
 7.05 Intr + 125290 125443  154  2  1   79   21    88 0.208   0.33
 7.06 Intr + 129490 130349  860  1  2  106   97   371 0.638  30.80
 7.07 Intr + 177727 177776   50  2  2   39   81   104 0.368   3.20
 7.08 Intr + 179042 179110   69  1  0   40  109    85 0.526   5.18
 7.09 Intr + 187568 187641   74  1  2   62   96    45 0.656   0.90
 7.10 Intr + 189008 189109  102  2  0  106   91    96 0.842  10.99
 7.11 Intr + 198932 199030   99  2  0  111   91    46 0.981   6.43
 7.12 Intr + 199630 199696   67  1  1   86    9    87 0.486  -0.49
 7.13 Intr + 201551 201696  146  1  2   92   96   130 0.657  13.28
 7.14 Term + 204828 204900   73  0  1   97   48    43 0.540  -1.42
 7.15 PlyA + 214471 214476    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:33165079_33380856|GENSCAN_predicted_peptide_1|180_aa
MRLREPLLSGSAAMPGASLQRACRLLVAVCALHLGVTLVYYLAGRDLSRLPQLVGVSTPL
QGGSNSAAAIGQSSGELRTGGARPPPPLGASSQPRPGGDSSPVVDSGPGPASNLTSVPVP
HTTALSLPACPEESPLLGKDSGRRQSEDWDPPGFPRQGPPDIPSGWLFYDSQPPSSGSEF

>gi568815589f:33165079_33380856|GENSCAN_predicted_CDS_1|543_bp
atgaggcttcgggagccgctcctgagcggcagcgccgcgatgccaggcgcgtccctacag
cgggcctgccgcctgctcgtggccgtctgcgctctgcaccttggcgtcaccctcgtttac
tacctggctggccgcgacctgagccgcctgccccaactggtcggagtctccacaccgctg
cagggcggctcgaacagtgccgccgccatcgggcagtcctccggggagctccggaccgga
ggggcccggccgccgcctcctctaggcgcctcctcccagccgcgcccgggtggcgactcc
agcccagtcgtggattctggccctggccccgctagcaacttgacctcggtcccagtgccc
cacaccaccgcactgtcgctgcccgcctgccctgaggagtccccgctgcttggtaaggac
tcgggtcggcgccagtcggaggattgggacccccccggatttccccgacagggtccccca
gacattccctcaggctggctcttctacgacagccagcctccctcttctggatcagagttt
taa

>gi568815589f:33165079_33380856|GENSCAN_predicted_peptide_2|40_aa
MAKPSPPSVLFPVLPNLRYGLHQISASERIWKDIDPNFIQ

>gi568815589f:33165079_33380856|GENSCAN_predicted_CDS_2|123_bp
atggccaaacctagcccaccgtctgttttgtttcctgttcttcccaacctgcgctatgga
cttcatcagatttcagcatcagagagaatatggaaggacatcgaccctaacttcatccag
tga

>gi568815589f:33165079_33380856|GENSCAN_predicted_peptide_3|135_aa
MSGLGQQTAPAVKEPAGLWGRHAIKRQLQERQWDECQTDVSAKYGRSSEEASSLVAWDRR
LAGLPTSHPSPPCALLPECLPEHSYGSQGTVPPELELLADRCKNMGTRDAGSSARIRVLA
KQLKSFDSPFPARPF

>gi568815589f:33165079_33380856|GENSCAN_predicted_CDS_3|408_bp
atgtcaggcctggggcaacaaacagcccctgctgtcaaggaacccgcaggcttgtggggc
cgtcatgctatcaaaaggcagctccaagagagacagtgggatgagtgtcaaacagatgtt
tcagccaagtatggcaggagctcagaggaggcctcatcacttgttgcctgggacagacgt
ctggctggtctgcccacctcccaccccagccctccctgtgcgctgctgccagaatgtctt
cctgaacacagctatggttcacaggggacagtccctcctgagctggaacttcttgctgac
aggtgtaagaacatggggaccagagacgcagggtcctctgctcgtatcagagtgctggcc
aagcaactgaagtcctttgacagcccctttcctgctaggcccttctaa

>gi568815589f:33165079_33380856|GENSCAN_predicted_peptide_4|80_aa
MREGCFPLPSSRDTTSAVDQPGSRQKTDGLLSVVIEGFNEDIVYESASKAKVPTIPLFLR
QHQHFQGYEGHSHQMGCNTE

>gi568815589f:33165079_33380856|GENSCAN_predicted_CDS_4|243_bp
atgagggaaggatgcttcccattaccctcatctagagacaccacctctgctgtggaccag
ccagggtctcggcagaaaacagatgggttactcagtgtggtcattgaagggtttaatgaa
gacattgtttatgaaagtgccagcaaggctaaggttcccactatccccttgtttctgaga
cagcatcagcatttccagggctatgaaggccacagccaccagatgggctgcaacactgaa
tga

>gi568815589f:33165079_33380856|GENSCAN_predicted_peptide_5|86_aa
MAVRQWVIALALAALLVVDREVPVAAGKLPFSRMPICEHMVESPTCSQMSNLVCGTDGLT
YTNECQLCLARIKTKQDIQIMKDGKC

>gi568815589f:33165079_33380856|GENSCAN_predicted_CDS_5|261_bp
atggccgtccgccagtgggtaatcgccctggccttggctgccctccttgttgtggacagg
gaagtgccagtggcagcaggaaagctccctttctcaagaatgcccatctgtgaacacatg
gtagagtctccaacctgttcccagatgtccaacctggtctgcggcactgatgggctcaca
tatacgaatgaatgccagctctgcttggcccggataaaaaccaaacaggacatccagatc
atgaaagatggcaaatgctga

>gi568815589f:33165079_33380856|GENSCAN_predicted_peptide_6|418_aa
MQSVRLGGGALGFAFPKSRFILSSREETQTLEQNQKRKQSHSRLDFRPLRREPRQSEPPA
QRGPPPSGRPPARSTASGHDRPTRGAAAGARRPRMKKKTRRRSTRSEELTRSEELTLSEE
ATWSEEATQSEEATQGEEMNRSQEVTRDEESTRSEEVTREEMAAAGLTVTVTHTQIMDAL
KCVQWERLGGKQSLAHYSKRDETNTIQGTGQSSHRKQMACDEKGNEKHDLHVTSQQGSSE
PVVQDLAQVVEEVIGVPQSFQKLIFKGKSLKEMETPLSALGIQDGCRVMLIGKKNSPQEE
VELKKLKHLEKSVEKIADQLEELNKELTGIQQGFLPKDLQAEALCKLDRRVKATIEQFMK
ILEEIDTLILPENFKDSRLKRKGLVKKVQAFLAECDTVEQNICQETERLQSTNFALAE

>gi568815589f:33165079_33380856|GENSCAN_predicted_CDS_6|1257_bp
atgcagtcagtcaggctgggcggcggagccttgggtttcgctttcccgaagagtcggttc
atcttgagcagccgcgaagaaacccaaacactagagcaaaaccagaaacggaagcagagt
cactcccgcctcgacttccggcccctccgccgggagccgcgccagtcggagcccccggcc
cagcgtggtccgcctccctctgggcgtccacctgcccggagtactgccagcgggcatgac
cgacccaccaggggcgccgccgccggcgctcgcaggccgcggatgaagaagaaaacccgg
cgccgctcgacccggagcgaggagttgacccggagcgaggagttgaccctgagtgaggaa
gcgacctggagtgaagaggcgacccagagtgaggaggcgacccagggcgaagagatgaat
cggagccaggaggtgacccgggacgaggagtcgacccggagcgaggaggtgaccagggag
gaaatggcggcagctgggctcaccgtgactgtcacccacacacaaatcatggatgcactc
aagtgtgttcagtgggagagacttggaggaaaacagtcacttgcccattacagcaagcga
gacgagaccaatacaatacagggtacagggcagtcaagccacaggaagcagatggcttgt
gatgaaaaaggcaatgagaagcacgaccttcatgttacctcccagcagggcagcagtgaa
ccagttgtccaagacctggcccaggttgttgaagaggtcataggggttccacagtctttt
cagaaactcatatttaagggaaaatctctgaaggaaatggaaacaccgttgtcagcactt
ggaatacaagatggttgccgggtcatgttaattgggaaaaagaacagtccacaggaagag
gttgaactaaagaagttgaaacatttggagaagtctgtggagaagatagctgaccagctg
gaagagttgaataaagagcttactggaatccagcagggttttctgcccaaggatttgcaa
gctgaagctctctgcaaacttgataggagagtaaaagccacaatagagcagtttatgaag
atcttggaggagattgacacactgatcctgccagaaaatttcaaagacagtagattgaaa
aggaaaggcttggtaaaaaaggttcaggcattcctagccgagtgtgacacagtggagcag
aacatctgccaggagactgagcggctgcagtctacaaactttgccctggccgagtga

>gi568815589f:33165079_33380856|GENSCAN_predicted_peptide_7|705_aa
MEQANYTIQSLKDTKTTVDAMKLGVKEMKKAYKQVKIDQIEDLQDQLEDMMEDANEIQEA
LSRSYGTPELDEDDLEAELDALGDELLADEDSSYLDEAASAPAIPEGVPTDTKNKVKAFS
VYISMQNSKGFMLDHKSGNLKATSLLLPPDTWRVYLTSRTRHTDSGCATSVAVYTARRCE
YSRGAGSPGHVTWQVPYDEISAVHQHSYHPSGSKPKSQQTSFQSSPCNKSPKSHGLQNQP
WQKLRNEKHHIRVKKAQSLAEQTSDTAGLESSTRSESGTDLREHSPSESEKEVVGADPRG
AKPKKATQFVYSYGRGPKVKGKLKCEWSNRTTPKPEDAGPESTKPVGVFHPDSSEASSRK
GVLDGYGARRNEQRRYPQKRPPWEVEGARPRPGRNPPKQEGHRHTNAGHRNNMGPIPKDD
LNERPAKSTCDSENLAVINKSSRRVDQEKCTVRRQDPQVVSPFSRGKQNHVLKNVETHTG
VKNLVIVETARHAGKPFPVVLGPLNVPKPALESMSVTIQVELQCECGRRKEMVICSEASS
TYQRIAAISMASKITDMQLGGSVEISKLITKKEVHQARRLAEAFHISEDSDPFNIRSSGS
KFSDSLKEDARKDLKFVSDVEKEMETLVEAVNKGKNSKKSHSFPPMNRDHRRIIHDLAQV
YGLESVSYDSEPKRNVVVTAIRNPGSSNLQKITKEPIIDYFDVQD

>gi568815589f:33165079_33380856|GENSCAN_predicted_CDS_7|2118_bp
atggaacaagccaattataccatccagtctttgaaggacaccaagaccacggttgatgct
atgaaactgggagtaaaggaaatgaagaaggcatacaagcaagtgaagatcgaccagatt
gaggatttacaagaccagctagaggatatgatggaagatgcaaatgaaatccaagaagca
ctgagtcgcagttatggcaccccagaactggatgaagatgatttagaagcagagttggat
gcactaggtgatgagcttctggctgatgaagacagttcttatttggatgaggcagcatct
gcacctgcaattccagaaggtgttcccactgatacaaaaaacaaggtgaaagctttttct
gtttatatttcaatgcaaaatagcaaaggctttatgcttgaccataagtctgggaatcta
aaagctactagtctcctcctcccgcccgacacctggcgcgtctatctgacgtcacgaacg
cgccacacagattcgggctgcgcaacctctgtggccgtctacacggcgcgcagatgcgaa
tattctcgcggcgccggaagtccggggcacgtgacctggcaggtcccttatgatgaaatc
tctgctgttcatcagcatagttatcatccgtcaggaagcaaacctaagagtcagcagacg
tctttccagtcctctccttgtaataaatcgcccaagagccatggccttcagaatcaacct
tggcagaaattgaggaatgagaagcaccatatcagagtcaagaaagcacagagtcttgct
gagcagacctcagatacagctggattagagagctcgaccagatcagagagtgggacagac
ctcagagagcatagtccttctgagagtgagaaggaagttgtgggtgcagatcccagggga
gcaaaacccaaaaaagcaacacagtttgtatacagctatggtagaggaccaaaagtcaag
gggaaactcaaatgtgaatggagtaaccgaacaactccaaaaccggaggatgctggaccc
gaaagtaccaaacctgtgggggttttccaccctgactcttcagaggcatcctctagaaaa
ggagtattggatgggtatggagccagacgaaatgagcagagaagatacccacagaaaagg
cctccctgggaagtggagggggccaggccacgaccaggcagaaatccaccaaaacaggag
ggccaccgacatacaaacgcaggacacagaaacaacatgggccccattccaaaggatgac
ctcaatgaaagaccagcaaaatctacctgtgacagtgagaacttggcagtcatcaacaag
tcttccaggagggttgaccaagagaaatgcactgtacggaggcaggatcctcaagtagta
tctcctttctcccgaggcaaacagaaccatgtgctaaagaatgtggaaacgcacacaggt
gtgaagaaccttgtcatcgtggaaactgccagacatgctggcaagccattccctgtggta
ctaggccccctgaatgtacccaaacctgcgctagagtccatgagtgtgaccatccaggta
gagctacagtgtgaatgtggacgaagaaaagagatggtgatttgctctgaagcatctagt
acttatcaaagaatagctgcaatctccatggcctctaagataacagacatgcagcttgga
ggttcagtggagatcagcaagttaattaccaaaaaggaagttcatcaagccaggagatta
gcagaggcatttcatatcagtgaggattctgatcctttcaatatacgttcttcagggtca
aaattcagtgatagtttgaaagaagatgccaggaaggacttaaagtttgtcagtgacgtt
gagaaggaaatggaaaccctcgtggaggccgtgaataagggaaagaatagtaagaaaagc
cacagcttccctcccatgaacagagaccaccgccggatcatccatgacttggcccaagtt
tatggcctggagagcgtgagctatgacagtgaaccgaagcgcaatgtggtggtcactgcc
atcaggaatcctgggagcagtaatttacagaaaataaccaaggagccaataattgactat
tttgacgtccaggactaa